Articles | Volume 17, issue 6
https://doi.org/10.5194/os-17-1527-2021
© Author(s) 2021. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/os-17-1527-2021
© Author(s) 2021. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Using feature-based verification methods to explore the spatial and temporal characteristics of the 2019 chlorophyll-a bloom season in a model of the European Northwest Shelf
Marion Mittermaier
CORRESPONDING AUTHOR
Verification, Impacts and Post-Processing, Weather Science, Met
Office, Exeter, EX1 3PB, UK
Rachel North
Verification, Impacts and Post-Processing, Weather Science, Met
Office, Exeter, EX1 3PB, UK
Jan Maksymczuk
Ocean Forecasting Research & Development, Weather Science, Met
Office, Exeter, EX1 3PB, UK
Christine Pequignet
Ocean Forecasting Research & Development, Weather Science, Met
Office, Exeter, EX1 3PB, UK
David Ford
Ocean Forecasting Research & Development, Weather Science, Met
Office, Exeter, EX1 3PB, UK
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Mike Bush, Tom Allen, Caroline Bain, Ian Boutle, John Edwards, Anke Finnenkoetter, Charmaine Franklin, Kirsty Hanley, Humphrey Lean, Adrian Lock, James Manners, Marion Mittermaier, Cyril Morcrette, Rachel North, Jon Petch, Chris Short, Simon Vosper, David Walters, Stuart Webster, Mark Weeks, Jonathan Wilkinson, Nigel Wood, and Mohamed Zerroukat
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David Walters, Ian Boutle, Malcolm Brooks, Thomas Melvin, Rachel Stratton, Simon Vosper, Helen Wells, Keith Williams, Nigel Wood, Thomas Allen, Andrew Bushell, Dan Copsey, Paul Earnshaw, John Edwards, Markus Gross, Steven Hardiman, Chris Harris, Julian Heming, Nicholas Klingaman, Richard Levine, James Manners, Gill Martin, Sean Milton, Marion Mittermaier, Cyril Morcrette, Thomas Riddick, Malcolm Roberts, Claudio Sanchez, Paul Selwood, Alison Stirling, Chris Smith, Dan Suri, Warren Tennant, Pier Luigi Vidale, Jonathan Wilkinson, Martin Willett, Steve Woolnough, and Prince Xavier
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Global Atmosphere (GA) configurations of the Unified Model (UM) and Global Land (GL) configurations of JULES are developed for use in any global atmospheric modelling application.
We describe a recent iteration of these configurations: GA6/GL6. This includes ENDGame: a new dynamical core designed to improve the model's accuracy, stability and scalability. GA6 is now operational in a variety of Met Office and UM collaborators applications and hence its documentation is important.
We describe a recent iteration of these configurations: GA6/GL6. This includes ENDGame: a new dynamical core designed to improve the model's accuracy, stability and scalability. GA6 is now operational in a variety of Met Office and UM collaborators applications and hence its documentation is important.
David A. Ford, Johan van der Molen, Kieran Hyder, John Bacon, Rosa Barciela, Veronique Creach, Robert McEwan, Piet Ruardij, and Rodney Forster
Biogeosciences, 14, 1419–1444, https://doi.org/10.5194/bg-14-1419-2017, https://doi.org/10.5194/bg-14-1419-2017, 2017
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This study presents a novel set of in situ observations of phytoplankton community structure for the North Sea. These observations were used to validate two physical–biogeochemical ocean model simulations, each of which used different variants of the widely used European Regional Seas Ecosystem Model (ERSEM). The results suggest the ability of the models to reproduce the observed phytoplankton community structure was dependent on the details of the biogeochemical model parameterizations used.
J. R. Siddorn, S. A. Good, C. M. Harris, H. W. Lewis, J. Maksymczuk, M. J. Martin, and A. Saulter
Ocean Sci., 12, 217–231, https://doi.org/10.5194/os-12-217-2016, https://doi.org/10.5194/os-12-217-2016, 2016
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The Met Office provides a range of services in the marine environment. To support these services, and to ensure they evolve to meet the demands of users and are based on the best available science, a number of scientific challenges need to be addressed. The paper summarises the key challenges, and highlights some priorities for the ocean monitoring and forecasting research group at the Met Office.
Cited articles
Allen, J. I. and Somerfield, P. J.: A multivariate approach to model skill
assessment, J. Mar. Syst., 76, 83-94. https://doi.org/10.1016/j.jmarsys.2008.05.009,
2009.
Allen, J. I., Holt, J. T., Blackford, J., and Proctor, R.: Error
quantification of a high-resolution coupled hydrodynamic-ecosystem
coastal-ocean model: Part 2. Chlorophyll-a, nutrients and SPM, J. Mar.
Syst., 68, 381-404, https://doi.org/10.1016/j.jmarsys.2007.01.005, 2007a.
Allen, J. I., Somerfield, P. J., and Gilbert, F. J.: Quantifying uncertainty
in high-resolution coupled hydrodynamic-ecosystem models, J. Mar. Syst.,
64, 3-14, https://doi.org/10.1016/j.jmarsys.2006.02.010, 2007b.
Antoine, D., André, J. M., and Morel, A.: Oceanic primary production: 2.
Estimation at global scale from satellite (Coastal Zone Color Scanner)
chlorophyll, Global Biogeochem. Cy., 10, 57-69, https://doi.org/10.1029/95GB02832, 1996.
Anugerahanti, P., Roy, S., and Haines, K.: A perturbed biogeochemistry model ensemble evaluated against in situ and satellite observations, Biogeosciences, 15, 6685–6711, https://doi.org/10.5194/bg-15-6685-2018, 2018.
Behrenfeld, M. J., Boss, E., Siegel, D. A., and Shea, D. M.: Carbon-based
ocean productivity and phytoplankton physiology from space, Global
Biogeochem. Cy., 19, GB1006, https://doi.org/10.1029/2004GB002299, 2005.
Bruggeman, J. and Bolding, K.: A general framework for aquatic
biogeochemical models, Environ. Model. Softw., 61, 249–265,
https://doi.org/10.1016/j.envsoft.2014.04.002, 2014.
Butenschön, M., Clark, J., Aldridge, J. N., Allen, J. I., Artioli, Y., Blackford, J., Bruggeman, J., Cazenave, P., Ciavatta, S., Kay, S., Lessin, G., van Leeuwen, S., van der Molen, J., de Mora, L., Polimene, L., Sailley, S., Stephens, N., and Torres, R.: ERSEM 15.06: a generic model for marine biogeochemistry and the ecosystem dynamics of the lower trophic levels, Geosci. Model Dev., 9, 1293–1339, https://doi.org/10.5194/gmd-9-1293-2016, 2016.
Campbell, J. W.: The lognormal distribution as a model for bio‐optical variability in the sea, J. Geophys. Res.- Ocean., 100, 13237-13254, 1995.
Chelton, D. B., Schlax, M. G., and Samelson, R. M.: Global observations of
nonlinear mesoscale eddies, Prog. Oceanogr., 91, 167–216,
https://doi.org/10.1016/j.pocean.2011.01.002, 2011.
Chiswell, S. M.: Annual cycles and spring blooms in phytoplankton: Don't
abandon Sverdrup completely, Mar. Ecol. Prog. Ser., 443, 39–50,
https://doi.org/10.3354/meps09453, 2011.
Clark, A. J., Bullock, R. G., Jensen, T. L., Xue, M., and Kong, F.:
Application of object-based time-domain diagnostics for tracking
precipitation systems in convection-allowing models, Weather Forecast., 29, 517–542, https://doi.org/10.1175/WAF-D-13-00098.1, 2014.
CMEMS: North Atlantic Chlorophyll (Copernicus-GlobColour) from Satellite Observations: Daily Interpolated (Reprocessed from 1997), available at: https://resources.marine.copernicus.eu/product-detail/OCEANCOLOUR_ATL_CHL_L4_REP_OBSERVATIONS_009_098/INFORMATION, CMEMS [data set], last access: 15 October 2021a.
CMEMS: Atlantic – European North West Shelf – Ocean Biogeochemistry Analysis and Forecast, available at: https://resources.marine.copernicus.eu/product-detail/NWSHELF_ANALYSISFORECAST_BGC_004_002/INFORMATION, CMEMS [data set], last access: 15 October 2021b.
Cole, H., Henson, S., Martin, A., and Yool, A.: Mind the gap: The impact of
missing data on the calculation of phytoplankton phenology metrics, J.
Geophys. Res., 117, C08030, https://doi.org/10.1029/2012JC008249, 2012.
Crocker, R. L. and Mittermaier, M. P.: Exploratory use of a satellite cloud
mask to verify NWP models, Meteorol. Appl.,
20, 197–205, 2013.
Crocker, R., Maksymczuk, J., Mittermaier, M., Tonani, M., and Pequignet, C.: An approach to the verification of high-resolution ocean models using spatial methods, Ocean Sci., 16, 831–845, https://doi.org/10.5194/os-16-831-2020, 2020.
Davis, C., Brown, B., and Bullock, R.: Object-based verification of
precipitation forecasts, Part I: Methods and
application to mesoscale rain areas, Mon. Weather Rev., 134, 1772–1784, 2006.
de Mora, L., Butenschön, M., and Allen, J. I.: The assessment of a global marine ecosystem model on the basis of emergent properties and ecosystem function: a case study with ERSEM, Geosci. Model Dev., 9, 59–76, https://doi.org/10.5194/gmd-9-59-2016, 2016.
Dorninger, M., Gilleland, E., Casati, B., Mittermaier, M. P., Ebert, E. E., Brown, B. G., and Wilson, L. J.: The setup of the MesoVICT project, B. Am. Meteorol. Soc., 99, 1887-1906. DOI: https://doi.org/10.1175/BAMS-D-17-0164.1, 2018.
Dutkiewicz, S., Hickman, A. E., and Jahn, O.: Modelling ocean-colour-derived chlorophyll a, Biogeosciences, 15, 613–630, https://doi.org/10.5194/bg-15-613-2018, 2018.
Edwards, K. P., Barciela, R., and Butenschön, M.: Validation of the NEMO-ERSEM operational ecosystem model for the North West European Continental Shelf, Ocean Sci., 8, 983–1000, https://doi.org/10.5194/os-8-983-2012, 2012.
Falkowski, P. G., Barber, R. T., and Smetacek, V.: Biogeochemical controls
and feedbacks on ocean primary production, Science, 281, 200–206,
https://doi.org/10.1126/science.281.5374.200, 1998.
Ford, D. A., van der Molen, J., Hyder, K., Bacon, J., Barciela, R., Creach, V., McEwan, R., Ruardij, P., and Forster, R.: Observing and modelling phytoplankton community structure in the North Sea, Biogeosciences, 14, 1419–1444, https://doi.org/10.5194/bg-14-1419-2017, 2017.
Gilleland, E., Ahijevych, D., Brown, B., and Ebert, E.: Intercomparison of
Spatial Forecast Verification Methods, Weather Forecast., 24, 1416–1430. https://doi.org/10.1175/2009WAF2222269.1, 2009.
Gilleland, E., Lindström, J., and Lindgren, F.: Analyzing the image warp
forecast verification method on precipitation fields from the
ICP, Weather Forecast., 25, 1249–1262, 2010.
Gordon, H. R., Clark, D. K., Brown, J. W., Brown, O. B., Evans, R. H., and
Broenkow, W. W.: Phytoplankton pigment concentrations in the Middle Atlantic
Bight: comparison of ship determinations and CZCS estimates, Appl. Opt.,
22 20–36, https://doi.org/10.1364/ao.22.000020, 1983.
Hague, M. and Vichi, M.: A Link Between CMIP5 Phytoplankton Phenology and
Sea Ice in the Atlantic Southern Ocean, Geophys. Res. Lett., 45, 6566–6575,
https://doi.org/10.1029/2018GL078061, 2018.
Hausmann, U. and Czaja, A.: The observed signature of mesoscale eddies in
sea surface temperature and the associated heat transport, Deep. Res. Part I
Oceanogr. Res. Pap., 70, 60–72, https://doi.org/10.1016/j.dsr.2012.08.005, 2012.
Hipsey, M. R., Gal, G., Arhonditsis, G. B., Carey, C. C., Elliott, J. A.,
Frassl, M. A., Janse, J. H., de Mora, L., and Robson, B. J.: A system of
metrics for the assessment and improvement of aquatic ecosystem models,
Environ. Model. Softw., 128, 104697, https://doi.org/10.1016/j.envsoft.2020.104697, 2020.
Jolliff, J. K., Kindle, J. C., Shulman, I., Penta, B., Friedrichs, M. A. M.,
Helber, R., and Arnone, R. A.: Summary diagrams for coupled
hydrodynamic-ecosystem model skill assessment, J. Mar. Sys., 76, 64–82,
2009.
King, R. R., While, J., Martin, M. J., Lea, D. J., Lemieux-Dudon, B.,
Waters, J., and O'Dea, E.: Improving the initialisation of the Met Office
operational shelf-seas model, Ocean Model., 130, 1–14,
https://doi.org/10.1016/j.ocemod.2018.07.004, 2018.
Le Traon, P. Y., Reppucci, A., Fanjul, E. A., Aouf, L., Behrens, A.,
Belmonte, M., Bentamy, A., Bertino, L., Brando, V. E., Kreiner, M. B.,
Benkiran, M., Carval, T., Ciliberti, S. A., Claustre, H., Clementi, E.,
Coppini, G., Cossarini, G., De Alfonso Alonso-Muñoyerro, M., Delamarche,
A., Dibarboure, G., Dinessen, F., Drevillon, M., Drillet, Y., Faugere, Y.,
Fernández, V., Fleming, A., Garcia-Hermosa, M. I., Sotillo, M. G.,
Garric, G., Gasparin, F., Giordan, C., Gehlen, M., Gregoire, M. L.,
Guinehut, S., Hamon, M., Harris, C., Hernandez, F., Hinkler, J. B., Hoyer,
J., Karvonen, J., Kay, S., King, R., Lavergne, T., Lemieux-Dudon, B., Lima,
L., Mao, C., Martin, M. J., Masina, S., Melet, A., Nardelli, B. B., Nolan,
G., Pascual, A., Pistoia, J., Palazov, A., Piolle, J. F., Pujol, M. I.,
Pequignet, A. C., Peneva, E., Gómez, B. P., de la Villeon, L. P.,
Pinardi, N., Pisano, A., Pouliquen, S., Reid, R., Remy, E., Santoleri, R.,
Siddorn, J., She, J., Staneva, J., Stoffelen, A., Tonani, M., Vandenbulcke,
L., von Schuckmann, K., Volpe, G., Wettre, C., and Zacharioudaki, A.: From
observation to information and users: The Copernicus Marine Service
Perspective, Front. Mar. Sci., 6, 234, https://doi.org/10.3389/fmars.2019.00234, 2019.
Lorenzen, C. J.: Surface Chlorophyll As An Index Of The Depth, Chlorophyll Content, And Primary Productivity Of The Euphotic Layer, Limnol. Oceanogr., 15, 479–480, https://doi.org/10.4319/lo.1970.15.3.0479, 1970.
Madec, G. and the NEMO team: “NEMO ocean engin”, NEMO reference manual 3_6_STABLE, Note du Pôle de modélisation, Institut Pierre-Simon Laplace (IPSL), France, No 27 ISSN No 1288–1619, https://doi.org/10.5281/zenodo.3248739, 2016.
Mass, C. F., Ovens, D., Westrick, K., and Colle, B. A.: Does increasing
horizontal resolution produce more skillful forecasts? The results of two
years of real-time numerical weather prediction over the Pacific northwest,
B. Am. Meteorol. Soc., 83, 407–430, 2002.
Mattern, J. P., Fennel, K., and Dowd, M.: Introduction and Assessment of Measures
for Quantitative Model-Data Comparison Using Satellite Images, Remote Sensing, 2, 794–818, https://doi.org/10.3390/rs2030794, 2010.
McEwan, Robert, Kay, S., and Ford, D.: Quality Information Document for CMEMS-NWS-QUID-004-002 (4.2), Zenodo [data], https://doi.org/10.5281/zenodo.4746438, 2021.
Mittermaier, M. and Bullock, R.: Using MODE to
explore the spatial and temporal characteristics of cloud cover forecasts
from high-resolution NWP models, Meteorol.
Appl., 20, 187–196, 2013.
Mittermaier, M., North, R., Semple, A., and Bullock, R.: Feature-based
diagnostic evaluation of global NWP forecasts, Mon. Weather Rev., 144, 3871–3893, https://doi.org/10.1175/MWR-D-15-0167.1, 2016.
Moore, T. S., Campbell, J. W., and Dowell, M. D.: A class-based approach to
characterizing and mapping the uncertainty of the MODIS ocean chlorophyll
product, Remote Sens. Environ., 113, 2424–2430,
https://doi.org/10.1016/j.rse.2009.07.016, 2009.
Morrow, R. and Le Traon, P. Y.: Recent advances in observing mesoscale ocean
dynamics with satellite altimetry, Adv. Space Res., 50, 1062–1076,
https://doi.org/10.1016/j.asr.2011.09.033, 2012.
O'Dea, E. J., Arnold, A. K., Edwards, K. P., Furner, R., Hyder, P., Martin,
M. J., Siddorn, J. R., Storkey, D., While, J., Holt, J. T., and Liu, H.: An
operational ocean forecast system incorporating NEMO and SST data
assimilation for the tidally driven European North-West shelf, J. Oper.
Oceanogr., 5, 3–17, https://doi.org/10.1080/1755876X.2012.11020128, 2012.
O'Dea, E., Furner, R., Wakelin, S., Siddorn, J., While, J., Sykes, P., King, R., Holt, J., and Hewitt, H.: The CO5 configuration of the 7 km Atlantic Margin Model: large-scale biases and sensitivity to forcing, physics options and vertical resolution, Geosci. Model Dev., 10, 2947–2969, https://doi.org/10.5194/gmd-10-2947-2017, 2017.
Pefanis, V.: Loading of coloured dissolved organic matter in the Arctic Mediterranean Sea and its effects on the ocean heat budget (Doctoral dissertation), Universität Bremen, https://doi.org/10.26092/elib/646, 2021.
Racault, M. F., Le Quéré, C., Buitenhuis, E., Sathyendranath, S.,
and Platt, T.: Phytoplankton phenology in the global ocean, Ecol. Indic.,
14, 152–163, 2012.
Rossa, A. M., Nurmi, P., and Ebert, E. E.: Overview of methods for the verification of quantitative precipitation forecasts, Precipitation: Advances in
Measurement, Estimation and Prediction, Springer, Berlin, Heidelberg, https://doi.org/10.1007/978-3-540-77655-0_16, pp. 419–452, 2008.
Saux Picart, S., Butenschön, M., and Shutler, J. D.: Wavelet-based spatial comparison technique for analysing and evaluating two-dimensional geophysical model fields, Geosci. Model Dev., 5, 223–230, https://doi.org/10.5194/gmd-5-223-2012, 2012.
Schalles, J. F.: Optical remote sensing techniques to estimate phytoplankton
chlorophyll a concentrations in coastal waters with varying suspended matter
and cdom concentrations, in: Remote Sensing and Digital Image Processing, Springer, Dordrecht 9, 27–79, 2006, https://doi.org/10.1007/1-4020-3968-9_3
Shutler, J. D., Smyth, T. J., Saux-Picart, S., Wakelin, S. L., Hyder, P.,
Orekhov, P., Grant, M. G., Tilstone, G. H., and Allen, J. I.: Evaluating the
ability of a hydrodynamic ecosystem model to capture inter- and intra-annual
spatial characteristics of chlorophyll-a in the north east Atlantic, J. Mar.
Syst., 88, 169–182, https://doi.org/10.1016/j.jmarsys.2011.03.013, 2011.
Siegel, D. A., Doney, S. C., and Yoder, J. A.: The North Atlantic Spring
Phytoplankton Bloom and Sverdrup's Critical Depth Hypothesis, Science, 296, 730–733, https://doi.org/10.1126/science.1069174, 2002.
Skákala, J., Ford, D., Brewin, R. J. W., McEwan, R., Kay, S., Taylor,
B., de Mora, L., and Ciavatta, S.: The Assimilation of Phytoplankton
Functional Types for Operational Forecasting in the Northwest European
Shelf, J. Geophys. Res.-Ocean., 123, 5230–5247,
https://doi.org/10.1029/2018JC014153, 2018.
Skákala, J., Bruggeman, J., Brewin, R. J. W., Ford, D. A., and Ciavatta,
S.: Improved Representation of Underwater Light Field and Its Impact on
Ecosystem Dynamics: A Study in the North Sea, J. Geophys. Res.-Ocean.,
125, e2020JC016122, https://doi.org/10.1029/2020JC016122, 2020.
Smyth, T. J., Allen, I., Atkinson, A., Bruun, J. T., Harmer, R. A., Pingree,
R. D., Widdicombe, C. E., and Somerfield, P. J.: Ocean net heat flux
influences seasonal to interannual patterns of plankton abundance, Plos One,
9, e98709, https://doi.org/10.1371/journal.pone.0098709, 2014.
Soppa, M. A., Völker, C., and Bracher, A.: Diatom Phenology in the Southern
Ocean: Mean Patterns, Trends and the Role of Climate Oscillations, Remote
Sens., 8, 420, https://doi.org/10.3390/rs8050420, 2016.
Stow, C. A., Jolliff, J., McGillicuddy, D. J., Doney, S. C., Allen, J. I.,
Friedrichs, M. A. M., Rose, K. A., and Wallhead, P.: Skill assessment for
coupled biological/physical models of marine systems, J. Mar. Syst.,
76, 4–15, https://doi.org/10.1016/j.jmarsys.2008.03.011, 2009.
Sverdrup, H. U.: On conditions for the vernal blooming of phytoplankton,
ICES J. Mar. Sci., 18, 287–295, https://doi.org/10.1093/icesjms/18.3.287, 1953.
Taylor, K. E.: Summarizing multiple aspects of model performance in a single
diagram, J. Geophys. Res.-Atmos., 106, 7183–7192, https://doi.org/10.1029/2000JD900719, 2001.
Vichi, M., Allen, J. I., Masina, S., and Hardman-Mountford, N. J.: The
emergence of ocean biogeochemical provinces: A quantitative assessment and a
diagnostic for model evaluation, Global Biogeochem. Cy., 25, GB2005,
https://doi.org/10.1029/2010GB003867, 2011.
Waters, J., Lea, D. J., Martin, M. J., Mirouze, I., Weaver, A., and While,
J.: Implementing a variational data assimilation system in an operational
1/4 degree global ocean model, Q. J. R. Meteorol. Soc., 141, 333–349,
https://doi.org/10.1002/qj.2388, 2015.
Win-Gildenmeister, M., McCabe, G., Prestopnik, J., Opatz, J., Halley Gotway, J., Jensen, T., Vigh, J., Row, M., Kalb, C., Fisher, H., Goodrich, L., Adriaansen, D., Frimel, J., Blank, L., and Arbetter, T.: METplus Verification System Coordinated Release (v4.0.0), Zenodo [code], https://doi.org/10.5281/zenodo.5567805, 2021.
Winder, M. and Cloern, J. E.: The annual cycles of phytoplankton biomass,
Philos. Trans. R. Soc. B Biol. Sci., 365, 3215–3226, https://doi.org/10.1098/rstb.2010.0125, 2010.
Short summary
Regions of enhanced chlorophyll-a concentrations can be identified by applying a threshold to the concentration value to a forecast and observed field (or analysis). These regions can then be treated and analysed as features using diagnostic techniques to consider of the evolution of the chlorophyll-a blooms in space and time. This allows us to understand whether the biogeochemistry in the model has any skill in predicting these blooms, their location, intensity, onset, duration and demise.
Regions of enhanced chlorophyll-a concentrations can be identified by applying a threshold to...