Articles | Volume 9, issue 4
https://doi.org/10.5194/os-9-585-2013
© Author(s) 2013. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/os-9-585-2013
© Author(s) 2013. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Biogeography of planktonic bacterial communities across the whole Mediterranean Sea
F. Mapelli
Department of Food, Environmental and Nutritional Sciences, DeFENS, University of Milan, Via Celoria 2, 20133 Milan, Italy
M. M. Varela
Instituto Español de Oceanografía, Centro Oceanográfico da Coruña, Paseo Marítimo Alcalde Francisco Vázquez no. 10A, Coruña, Spain
M. Barbato
Department of Food, Environmental and Nutritional Sciences, DeFENS, University of Milan, Via Celoria 2, 20133 Milan, Italy
R. Alvariño
Instituto Español de Oceanografía, Centro Oceanográfico da Coruña, Paseo Marítimo Alcalde Francisco Vázquez no. 10A, Coruña, Spain
M. Fusi
Department of Food, Environmental and Nutritional Sciences, DeFENS, University of Milan, Via Celoria 2, 20133 Milan, Italy
M. Álvarez
Instituto Español de Oceanografía, Centro Oceanográfico da Coruña, Paseo Marítimo Alcalde Francisco Vázquez no. 10A, Coruña, Spain
G. Merlino
Department of Food, Environmental and Nutritional Sciences, DeFENS, University of Milan, Via Celoria 2, 20133 Milan, Italy
D. Daffonchio
Department of Food, Environmental and Nutritional Sciences, DeFENS, University of Milan, Via Celoria 2, 20133 Milan, Italy
S. Borin
Department of Food, Environmental and Nutritional Sciences, DeFENS, University of Milan, Via Celoria 2, 20133 Milan, Italy
Related authors
No articles found.
Malek Belgacem, Katrin Schroeder, Siv K. Lauvset, Marta Álvarez, Jacopo Chiggiato, Mireno Borghini, Carolina Cantoni, Tiziana Ciuffardi, and Stefania Sparnocchia
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2024-365, https://doi.org/10.5194/essd-2024-365, 2024
Preprint under review for ESSD
Short summary
Short summary
Having consistent dissolved Oxygen (O2) data is crucial for understanding the health of our oceans. By monitoring O2 levels, we can spot changes in water quality. Reliable data helps scientist and policymakers make informed decisions to protect marine environments, ensuring practices that benefit both wildlife and people. The Mediterranean Sea is particularly sensitive to climate change. O2WMED dataset- a compilation of data that provides a clear picture of O2 changes over the past 20 years.
This article is included in the Encyclopedia of Geosciences
Siv K. Lauvset, Nico Lange, Toste Tanhua, Henry C. Bittig, Are Olsen, Alex Kozyr, Marta Álvarez, Kumiko Azetsu-Scott, Peter J. Brown, Brendan R. Carter, Leticia Cotrim da Cunha, Mario Hoppema, Matthew P. Humphreys, Masao Ishii, Emil Jeansson, Akihiko Murata, Jens Daniel Müller, Fiz F. Pérez, Carsten Schirnick, Reiner Steinfeldt, Toru Suzuki, Adam Ulfsbo, Anton Velo, Ryan J. Woosley, and Robert M. Key
Earth Syst. Sci. Data, 16, 2047–2072, https://doi.org/10.5194/essd-16-2047-2024, https://doi.org/10.5194/essd-16-2047-2024, 2024
Short summary
Short summary
GLODAP is a data product for ocean inorganic carbon and related biogeochemical variables measured by the chemical analysis of water bottle samples from scientific cruises. GLODAPv2.2023 is the fifth update of GLODAPv2 from 2016. The data that are included have been subjected to extensive quality controlling, including systematic evaluation of measurement biases. This version contains data from 1108 hydrographic cruises covering the world's oceans from 1972 to 2021.
This article is included in the Encyclopedia of Geosciences
Nico Lange, Björn Fiedler, Marta Álvarez, Alice Benoit-Cattin, Heather Benway, Pier Luigi Buttigieg, Laurent Coppola, Kim Currie, Susana Flecha, Dana S. Gerlach, Makio Honda, I. Emma Huertas, Siv K. Lauvset, Frank Muller-Karger, Arne Körtzinger, Kevin M. O'Brien, Sólveig R. Ólafsdóttir, Fernando C. Pacheco, Digna Rueda-Roa, Ingunn Skjelvan, Masahide Wakita, Angelicque White, and Toste Tanhua
Earth Syst. Sci. Data, 16, 1901–1931, https://doi.org/10.5194/essd-16-1901-2024, https://doi.org/10.5194/essd-16-1901-2024, 2024
Short summary
Short summary
The Synthesis Product for Ocean Time Series (SPOTS) is a novel achievement expanding and complementing the biogeochemical data landscape by providing consistent and high-quality biogeochemical time-series data from 12 ship-based fixed time-series programs. SPOTS covers multiple unique marine environments and time-series ranges, including data from 1983 to 2021. All in all, it facilitates a variety of applications that benefit from the collective value of biogeochemical time-series observations.
This article is included in the Encyclopedia of Geosciences
Siv K. Lauvset, Nico Lange, Toste Tanhua, Henry C. Bittig, Are Olsen, Alex Kozyr, Simone Alin, Marta Álvarez, Kumiko Azetsu-Scott, Leticia Barbero, Susan Becker, Peter J. Brown, Brendan R. Carter, Leticia Cotrim da Cunha, Richard A. Feely, Mario Hoppema, Matthew P. Humphreys, Masao Ishii, Emil Jeansson, Li-Qing Jiang, Steve D. Jones, Claire Lo Monaco, Akihiko Murata, Jens Daniel Müller, Fiz F. Pérez, Benjamin Pfeil, Carsten Schirnick, Reiner Steinfeldt, Toru Suzuki, Bronte Tilbrook, Adam Ulfsbo, Anton Velo, Ryan J. Woosley, and Robert M. Key
Earth Syst. Sci. Data, 14, 5543–5572, https://doi.org/10.5194/essd-14-5543-2022, https://doi.org/10.5194/essd-14-5543-2022, 2022
Short summary
Short summary
GLODAP is a data product for ocean inorganic carbon and related biogeochemical variables measured by the chemical analysis of water bottle samples from scientific cruises. GLODAPv2.2022 is the fourth update of GLODAPv2 from 2016. The data that are included have been subjected to extensive quality controlling, including systematic evaluation of measurement biases. This version contains data from 1085 hydrographic cruises covering the world's oceans from 1972 to 2021.
This article is included in the Encyclopedia of Geosciences
Siv K. Lauvset, Nico Lange, Toste Tanhua, Henry C. Bittig, Are Olsen, Alex Kozyr, Marta Álvarez, Susan Becker, Peter J. Brown, Brendan R. Carter, Leticia Cotrim da Cunha, Richard A. Feely, Steven van Heuven, Mario Hoppema, Masao Ishii, Emil Jeansson, Sara Jutterström, Steve D. Jones, Maren K. Karlsen, Claire Lo Monaco, Patrick Michaelis, Akihiko Murata, Fiz F. Pérez, Benjamin Pfeil, Carsten Schirnick, Reiner Steinfeldt, Toru Suzuki, Bronte Tilbrook, Anton Velo, Rik Wanninkhof, Ryan J. Woosley, and Robert M. Key
Earth Syst. Sci. Data, 13, 5565–5589, https://doi.org/10.5194/essd-13-5565-2021, https://doi.org/10.5194/essd-13-5565-2021, 2021
Short summary
Short summary
GLODAP is a data product for ocean inorganic carbon and related biogeochemical variables measured by the chemical analysis of water bottle samples from scientific cruises. GLODAPv2.2021 is the third update of GLODAPv2 from 2016. The data that are included have been subjected to extensive quality control, including systematic evaluation of measurement biases. This version contains data from 989 hydrographic cruises covering the world's oceans from 1972 to 2020.
This article is included in the Encyclopedia of Geosciences
Are Olsen, Nico Lange, Robert M. Key, Toste Tanhua, Henry C. Bittig, Alex Kozyr, Marta Álvarez, Kumiko Azetsu-Scott, Susan Becker, Peter J. Brown, Brendan R. Carter, Leticia Cotrim da Cunha, Richard A. Feely, Steven van Heuven, Mario Hoppema, Masao Ishii, Emil Jeansson, Sara Jutterström, Camilla S. Landa, Siv K. Lauvset, Patrick Michaelis, Akihiko Murata, Fiz F. Pérez, Benjamin Pfeil, Carsten Schirnick, Reiner Steinfeldt, Toru Suzuki, Bronte Tilbrook, Anton Velo, Rik Wanninkhof, and Ryan J. Woosley
Earth Syst. Sci. Data, 12, 3653–3678, https://doi.org/10.5194/essd-12-3653-2020, https://doi.org/10.5194/essd-12-3653-2020, 2020
Short summary
Short summary
GLODAP is a data product for ocean inorganic carbon and related biogeochemical variables measured by chemical analysis of water bottle samples at scientific cruises. GLODAPv2.2020 is the second update of GLODAPv2 from 2016. The data that are included have been subjected to extensive quality control, including systematic evaluation of measurement biases. This version contains data from 946 hydrographic cruises covering the world's oceans from 1972 to 2019.
This article is included in the Encyclopedia of Geosciences
Dagmar Hainbucher, Marta Álvarez, Blanca Astray Uceda, Giancarlo Bachi, Vanessa Cardin, Paolo Celentano, Spyros Chaikalis, Maria del Mar Chaves Montero, Giuseppe Civitarese, Noelia M. Fajar, Francois Fripiat, Lennart Gerke, Alexandra Gogou, Elisa F. Guallart, Birte Gülk, Abed El Rahman Hassoun, Nico Lange, Andrea Rochner, Chiara Santinelli, Tobias Steinhoff, Toste Tanhua, Lidia Urbini, Dimitrios Velaoras, Fabian Wolf, and Andreas Welsch
Earth Syst. Sci. Data, 12, 2747–2763, https://doi.org/10.5194/essd-12-2747-2020, https://doi.org/10.5194/essd-12-2747-2020, 2020
Short summary
Short summary
We report on data from an oceanographic cruise in the Mediterranean Sea (MSM72, March 2018). The main objective of the cruise was to contribute to the understanding of long-term changes and trends in physical and biogeochemical parameters, such as the anthropogenic carbon uptake, and further assess the hydrographical situation after the Eastern and Western Mediterranean Transients. Multidisciplinary measurements were conducted on a predominantly
zonal section throughout the Mediterranean Sea.
This article is included in the Encyclopedia of Geosciences
Malek Belgacem, Jacopo Chiggiato, Mireno Borghini, Bruno Pavoni, Gabriella Cerrati, Francesco Acri, Stefano Cozzi, Alberto Ribotti, Marta Álvarez, Siv K. Lauvset, and Katrin Schroeder
Earth Syst. Sci. Data, 12, 1985–2011, https://doi.org/10.5194/essd-12-1985-2020, https://doi.org/10.5194/essd-12-1985-2020, 2020
Short summary
Short summary
Long-term time series are a fundamental prerequisite to understanding and detecting climate shifts and trends. In marginal seas, such as the Mediterranean Sea, there are still monitoring gaps. An extensive dataset of dissolved inorganic nutrient profiles were collected between 2004 and 2017 in the western Mediterranean Sea to provide to the scientific community a publicly available, long-term, quality-controlled, internally consistent new database.
This article is included in the Encyclopedia of Geosciences
Are Olsen, Nico Lange, Robert M. Key, Toste Tanhua, Marta Álvarez, Susan Becker, Henry C. Bittig, Brendan R. Carter, Leticia Cotrim da Cunha, Richard A. Feely, Steven van Heuven, Mario Hoppema, Masao Ishii, Emil Jeansson, Steve D. Jones, Sara Jutterström, Maren K. Karlsen, Alex Kozyr, Siv K. Lauvset, Claire Lo Monaco, Akihiko Murata, Fiz F. Pérez, Benjamin Pfeil, Carsten Schirnick, Reiner Steinfeldt, Toru Suzuki, Maciej Telszewski, Bronte Tilbrook, Anton Velo, and Rik Wanninkhof
Earth Syst. Sci. Data, 11, 1437–1461, https://doi.org/10.5194/essd-11-1437-2019, https://doi.org/10.5194/essd-11-1437-2019, 2019
Short summary
Short summary
GLODAP is a data product for ocean inorganic carbon and related biogeochemical variables measured by chemical analysis of water bottle samples at scientific cruises. GLODAPv2.2019 is the first update of GLODAPv2 from 2016. The data that are included have been subjected to extensive quality control, including systematic evaluation of measurement biases. This version contains data from 840 hydrographic cruises covering the world's oceans from 1972 to 2017.
This article is included in the Encyclopedia of Geosciences
A. Oviedo, P. Ziveri, M. Álvarez, and T. Tanhua
Ocean Sci., 11, 13–32, https://doi.org/10.5194/os-11-13-2015, https://doi.org/10.5194/os-11-13-2015, 2015
P. Malanotte-Rizzoli, V. Artale, G. L. Borzelli-Eusebi, S. Brenner, A. Crise, M. Gacic, N. Kress, S. Marullo, M. Ribera d'Alcalà, S. Sofianos, T. Tanhua, A. Theocharis, M. Alvarez, Y. Ashkenazy, A. Bergamasco, V. Cardin, S. Carniel, G. Civitarese, F. D'Ortenzio, J. Font, E. Garcia-Ladona, J. M. Garcia-Lafuente, A. Gogou, M. Gregoire, D. Hainbucher, H. Kontoyannis, V. Kovacevic, E. Kraskapoulou, G. Kroskos, A. Incarbona, M. G. Mazzocchi, M. Orlic, E. Ozsoy, A. Pascual, P.-M. Poulain, W. Roether, A. Rubino, K. Schroeder, J. Siokou-Frangou, E. Souvermezoglou, M. Sprovieri, J. Tintoré, and G. Triantafyllou
Ocean Sci., 10, 281–322, https://doi.org/10.5194/os-10-281-2014, https://doi.org/10.5194/os-10-281-2014, 2014
M. Álvarez, H. Sanleón-Bartolomé, T. Tanhua, L. Mintrop, A. Luchetta, C. Cantoni, K. Schroeder, and G. Civitarese
Ocean Sci., 10, 69–92, https://doi.org/10.5194/os-10-69-2014, https://doi.org/10.5194/os-10-69-2014, 2014
T. Tanhua, D. Hainbucher, K. Schroeder, V. Cardin, M. Álvarez, and G. Civitarese
Ocean Sci., 9, 789–803, https://doi.org/10.5194/os-9-789-2013, https://doi.org/10.5194/os-9-789-2013, 2013
T. Tanhua, D. Hainbucher, V. Cardin, M. Álvarez, G. Civitarese, A. P. McNichol, and R. M. Key
Earth Syst. Sci. Data, 5, 289–294, https://doi.org/10.5194/essd-5-289-2013, https://doi.org/10.5194/essd-5-289-2013, 2013
Cited articles
Agogué, H., Lamy, D., Neal, P. R., Sogin, M. L., and Herndl, G. J.: Water mass-specificity of bacterial communities in the North Atlantic revealed by massively parallel sequencing, Mol. Ecol., 20, 258–274, 2011.
Anderson, M. J.: A new method for non-parametric multivariate analysis of variance, Austral. Ecol., 26, 32–46, 2001.
Anderson, M. J.: DISTLM v.2: a FORTRAN computer program to calculate a distance-based multivariate analysis for a linear model, Department of Statistics, University of Auckland, 2002.
Anderson, M. J., Gorley, R. N., and Clarke, K. R.: PERMANOVA+ for PRIMER: Guide to Software and Statistical Methods, PRIMER-E, Plymouth, UK, 2008.
Arístegui, J., Gasol, J. M., Duarte, C. M., and Herndl, G. J.: Microbial Ocenography of the dark ocean's pelagic realm, Limnol. Ocenogr., 54, 1501–1529, 2009.
Bensi, M., Rubino, A., Cardin, V. R., Hainbucher, D., and Mancero-Mosquera, I.: Structure and variability of the abyssal water masses in the Ionian Sea in the period 2003–2010, J. Geophys. Res., 118, 931–943, https://doi.org/10.1029/2012JC008178, 2013
Borin, S., Brusetti, L., Daffonchio, D., Delaney, E., and Baldi, F.: Biodiversity of prokaryotic communities in sediments of different sub-basins of the Venice lagoon, Res. Microbiol., 5, 307–314, 2009a.
Borin, S., Brusetti, L., Mapelli, F., D'Auria, G., Brusa, T., Marzorati, M., Rizzi, A., Yakimov, M., Marty, D., De Lange G. J., Van der Wielen, P., Bolhuis, H., McGenityh, T. J., Polymenakoui, P. N., Malinverno, E., Giuliano, L., Corselli, C., and Daffonchio, D.: Sulfur cyclingandmethanogenesisprimarilydrivemicrobialcolonizationofthehighlysulfidic Urania deephypersalinebasin, P. Natl. Acad. Sci USA, 106, 9151–9156, 2009b.
Brown, M. V., Schwalbach, M. S., Hewson, I., and Fuhrman, J. A.: Coupling 16S-ITS rDNA clone libraries and automated ribosomal intergenic spacer analysis to show marine microbial diversity: development and application to a time series, Environ. Microbiol. 7, 1466–1479, 2005.
Cardinale, M., Brusetti, L., Quatrini, P., Borin, S., Puglia, A. M., Rizzi, A., Zanardini, E., Sorlini, C., Corselli, C., and Daffonchio, D.: Comparison of different primer sets for use in automated ribosomal intergenic spacer analysis of complex bacterial communities, Appl. Environ. Microb., 70, 6147–6156, 2004.
Clarke, K. and R. Gorley: "PRIMER v6." User manual/tutorial. Plymouth routine in mulitvariate ecological research, Plymouth Marine Laboratory, 2006.
Coll, M., Piroddi, C., Steenbeek, J., Kaschner, K., Ben RaisLasram, F., Aguzzi, J., Ballesteros, E., Bianchi, C. N., Corbera, J., Dailianis, T., Danovaro, R., Estrada, M., Froglia, C., Gali, B. S., Gasol, J. M., Gertwagen, R., Gil, J., Guilhaumon, F., Kesner-Reyes, K., Kitsos, M. S., Koukouras, A., Lampadariou, N., Laxamana, E., López-Fé de la Cuadra, C. M., Lotze, H. K., Martin, D., Mouillot, D., Oro, D., Raicevich, S., Rius-Barile, J., Saiz-Salinas, J. I., San Vicente, C., Somot, S., Templado, J., Turon, X., Vafidis, D., Villanueva, R., and Voultsiadou, E.: The Biodiversity of the Mediterranean Sea: Estimates, Patterns, and Threats, Plos One, 5, 1–36, 2010.
De Corte, D., Yokokawa, T., Varela, M. M., Agogué, H., and Herndl, G. J.: Spatial distribution of Bacteria and Archaea and amoA gene copy numbers throughout the water column of the Eastern Mediterranean Sea, ISME J., 3, 147–158, 2009.
DeLong, E. F., Preston, C. M., Mincer,T., Rich, V., Hallam, S. J., Frigaard, N., Martinez, A., Sullivan, M. B., Edwards, R., Rodriguez Brito, B., Chisholm,S. W., and Karl, D. M.: Community Genomics Among Stratified Microbial Assemblages in the Ocean's Interior, Science, 311, 496–503, 2006.
Fegatella, F., Lim, J., Kjelleberg, S., and Cavicchioli, R.: Implications of rRNA operon copy number and ribosome content in the marine oligotrophic ultramicrobacteriumSphingomonas sp. strain RB2256, Appl. Environ. Microb., 64, 4433–4438, 1998.
Feingersch, R., Suzuki M. T., Shmoish, M., Sharon, I., Sabehi, G., Partensky, F., and Béjà, O.: Microbial community genomics in eastern Mediterranean Sea surface waters, ISME J., 4, 78–87, 2010.
Fuhrman J. A., Steele, J. A., Hewson, I., Schwalbach, M. S., Brown, M. V., Green, J. L., Brown, J. H.: A latitudinal diversity gradient in planktonic marine bacteria, P. Natl. Acad. Sci. USA, 105, 7774–7778, 2008.
Gačić, M., EusebiBorzelli, G. L., Civitarese, G., Cardin, V., and Yari, S.: Can internal processes sustain reversals of the ocean upper circulation? The Ionian Sea example, Geophys. Res. Lett., 37, L09608, https://doi.org/10.1029/2010GL043216, 2010.
Galand, P. E., Lovejoy, C., Hamilton, A. K., Ingram, R. G., Pedneault E., and Carmack, E. C.: Archaeal diversity and a gene for ammonia oxidation are coupled to oceanic circulation, Environ. Microbiol., 11, 971–980, 2009.
Hamilton, A. K., Lovejoy, C., Galand, P. E., and Ingram, R. G.: Water masses and biogeography of picoeukaryote assemblages in a cold hydrographically complex system, Limnol. Oceanogr., 53, 922–935, 2008.
Hecht, A., Pinardi, N., and Robinson, A. R.: Currents, water masses, eddies and jets in the mediterraneanlevantine basin, J. Phys. Oceanogr., 18, 1320–1353, 1988.
Hewson, I., Steele, J. A., Capone, D. G., and Fuhrman, J. A.: Temporal and spatial scales of variation in bacterioplankton assemblages of oligotrophic surface waters, Mar. Ecol.-Prog. Ser., 311, 67–77, 2006.
Lamy, D., Jeanthon, C., Cottrell, M. T., Kirchman, D. L., Van Wambeke, F., Ras, J., Dahan, O., Pujo-Pay, M., Oriol, L., Bariat, L., Catala, P., Cornet-Barthaux, V., and Lebaron, P.: Ecology of aerobic anoxygenic phototrophic bacteria along an oligotrophic gradient in the Mediterranean Sea, Biogeosciences, 8, 973–985, https://doi.org/10.5194/bg-8-973-2011, 2011.
Li, W. K. W., McLaughlin, F. A., Lovejoy, C., and Carmack, E. C.: Smallest algae thrive as the Arctic Ocean freshens, Science, 326, p. 539, 2009.
Lovejoy, C., Carmack, E. C., Legendre, L., and Price, N. M.: Water column interleaving: a new physical mechanism determining protist communities and bacterial states, Limnol. Oceanogr., 47, 1819–1831, 2002.
Luna, G. M., Binachelli, S., Decembrini, F., De Domenico, E., Danovaro, R., and Dell'Anno, A.: The dark portion of the Mediterranean Sea is a bioreactorof organic matter cycling, Global Biogeochem. Cy., 26, GB2017, https://doi.org/10.1029/2011GB004168, 2012.
Mella-Flores, D., Mazard, S., Humily, F., Partensky, F., Mahé, F., Bariat, L., Courties, C., Marie, D., Ras, J., Mauriac, R., Jeanthon, C., Mahdi Bendif, E., Ostrowski, M., Scanlan, D. J., and Garczarek, L.: Is the distribution of Prochlorococcus and Synechococcus ecotypesin the Mediterranean Sea affected by global warming?, Biogeosciences, 8, 2785–2804, https://doi.org/10.5194/bg-8-2785-2011, 2011.
Moeseneder, M. M., Winter, C., and Herndl G. J.: Horizontal and vertical complexity of attached and free-living bacteria of the eastern Mediterranean Sea, determined by 16S rDNA and 16S rRNA fingerprints, Limnol. Oceanogr., 46, 95–107, 2001.
Nagata, T., Tamburini, C., Arístegui, J., Baltar, F., Bochdansky, A. B., Fonda-Umani, S., Fukuda, H., Gogou, A., Hansell, D. A., Hansman, R. L., Herndl, G. J., Panagiotopoulos, C., Reinthaler, T., Sohrin, Rumi, S., Verdugo, P. Yamada, N., Yamashita, Y., Yokokawa, T., and Barlett, D. H.: Emerging concepts on microbial processes in the bathypelagic ocean – ecology, biogeochemistry, and genomic, Deep-Sea Res. Pt. II, 57, 1519-1536, 2010.
Pinardi, N. and Masetti, E.: Variability of the large scale general circulation of the Mediterranean Sea from observations and modelling: a review, Palaeogeogr. Palaeocl., 158, 153–173, 2000.
Rahav, E., Herut, B., Levi, A., Mulholland, M. R., and Berman-Frank, I.: Springtime contribution of dinitrogenfixation to primary production across theMediterranean Sea, Ocean Sci. Discuss., in preparation, 2013.
Rubino, A. and Hainbucher, D.: A large abrupt change in the abyssal water masses of the eastern Mediterranean, Geophys. Res. Lett., 34, L23607, https://doi.org/10.1029/2007GL031737, 2007.
Rubino, A., Falcini, F., Zanchettin, D., Bouche, V., Salusti, E., Bensi, M., Riccobene, G., De Bonis, G., Masullo, R., Simeone, F., Piattelli, P., Sapienza, P., Russo, S., Platania, G., Sedita, M., Reina, P., Avolio, R., Randazzo, N., Hainbucher, D., and Capone, A.: Abyssalundularvortices in the EasternMediterraneanbasin, Nature Comm., 3, 834, https://doi.org/10.1038/ncomms1836, 2012.
Tamburini, C., Garel, M., Al Ali, B., Mérigot, B., Kriwy, P., Charrière , B., and Budillon, G.: Distribution and activity of Bacteria and Archaea in the different water masses of the Tyrrhenian Sea, Deep-Sea Res. Pt. II, 56, 700–712, 2009.
Tanhua, T., Hainbucher, D., Cardin, V., Álvarez, M., and Civitarese, G.: Repeat hydrography in the Mediterranean Sea, data from the Meteor cruise 84/3 in 2011, Earth Syst. Sci. Data Discuss., 6, 59–71, https://doi.org/10.5194/essdd-6-59-2013, 2013a.
Tanhua, T., Hainbucher, D., Schr"oder, K., Cardin, V., Álvarez, M., and Civitarese, G.: The Mediterranean Sea system: a review and an introduction to the special issue, Ocean Sci. Discuss., 10, 581–617, https://doi.org/10.5194/osd-10-581-2013, 2013b.
Thingstad, T. F., Krom, M. D., Mantoura, R. F. C., Flaten, G. A. F., Groom, S., Herut, B., Kress, N., Law, C. S., Pasternak, A., Pitta, P., Psarra, S., Rassoulzadegan, F., Tanaka, T., Tselepides, A., Wassmann, P., Woodward, E. M. S., Wexels Riser, C., Zodiatis, G., and Zohary, T.: Nature of phosphorus limitation in the ultraoligotrophic Eastern Mediterranean, Science, 309, 1068–1071, 2005.
Varela, M. M., van Aken, H. M., Sintes, E., and Herndl, G. J.: Latitudinal trends of Crenarchaeota and Bacteria in the meso- and bathypelagic water masses of the Eastern North Atlantic, Environ. Microbiol., 10, 110–124, 2008a.
Varela, M. M., van Aken, H. M., and Herndl, G. J.: Abundance and activity of Chloroflexy-type SAR202 bacterioplankton in the meso- and bathypelagic waters of the (sub) tropical Atlantic, Environ. Microbiol., 10, 1903–1911, 2008b.
Winter, C., Moeseneder, M. M., Herndl, G. J., and Weinbauer, M. G.: Relationship of Geographic Distance, Depth, Temperature, and Viruses with Prokaryotic Communities in the Eastern Tropical Atlantic Ocean, Microb. Ecol., 56, 383–389, 2008.
Winter, C., Kerros, M.-E., and Weinbauer, M. G.: Seasonal changes of bacterial and archaeal communities in the dark ocean: evidence from the Mediterranean Sea, Limnol. Ocenogr., 54, 160–170, 2009.
Yilmaz, P., Iversen, M. H., Hankeln, W., Kottmann, R., Quast, C., and Glöckner, F. O.: Ecological structuring of bacterial and archaeal taxa in surface ocean waters, FEMS Microbiol. Ecol., 8, 373–385, 2012.
Yokokawa, T., De Corte, D., Sintes, E., and Herndl, G. J.: Spatial patterns of bacterial abundance, activity and community composition in relation to water masses in the eastern Mediterranean Sea, Aquat. Microb. Ecol., 59, 185–195, 2010.
Zaccone, R., Boldrin, A., Caruso, G., La Ferla, R., Maimone, G., Santinelli, C., and Turchetto, M.: Enzymatic Activities and Prokaryotic Abundance in Relationto Organic Matter along a West–East MediterraneanTransect (TRANSMED Cruise), Microb. Ecol., 64, 54–66, 2012.
Zehr, J. P., Hewson, I., and Moisander, P.: Molecular biology techniques and applications for ocean sensing, Ocean Sci., 5, 101–113, https://doi.org/10.5194/os-5-101-2009, 2009.
Download
The requested paper has a corresponding corrigendum published. Please read the corrigendum first before downloading the article.
- Article
(3894 KB) - Metadata XML