Articles | Volume 16, issue 5
https://doi.org/10.5194/os-16-1017-2020
© Author(s) 2020. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/os-16-1017-2020
© Author(s) 2020. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Research article
| 
07 Sep 2020
Research article |
| 07 Sep 2020
| 07 Sep 2020
Changes in the composition of marine and sea-ice diatoms derived from sedimentary ancient DNA of the eastern Fram Strait over the past 30 000 years
Heike H. Zimmermann
CORRESPONDING AUTHOR
Polar Terrestrial Environmental Systems, Alfred Wegener Institute
Helmholtz Centre for Polar and Marine Research, 14473 Potsdam, Germany
Kathleen R. Stoof-Leichsenring
Polar Terrestrial Environmental Systems, Alfred Wegener Institute
Helmholtz Centre for Polar and Marine Research, 14473 Potsdam, Germany
Stefan Kruse
Polar Terrestrial Environmental Systems, Alfred Wegener Institute
Helmholtz Centre for Polar and Marine Research, 14473 Potsdam, Germany
Juliane Müller
Marine Geology, Alfred Wegener Institute Helmholtz Centre for Polar
and Marine Research, 27568 Bremerhaven, Germany
MARUM, University of Bremen, 28359 Bremen, Germany
Faculty of Geosciences, University of Bremen, 28334 Bremen, Germany
Ruediger Stein
Marine Geology, Alfred Wegener Institute Helmholtz Centre for Polar
and Marine Research, 27568 Bremerhaven, Germany
MARUM, University of Bremen, 28359 Bremen, Germany
Faculty of Geosciences, University of Bremen, 28334 Bremen, Germany
Ralf Tiedemann
Marine Geology, Alfred Wegener Institute Helmholtz Centre for Polar
and Marine Research, 27568 Bremerhaven, Germany
Ulrike Herzschuh
CORRESPONDING AUTHOR
Polar Terrestrial Environmental Systems, Alfred Wegener Institute
Helmholtz Centre for Polar and Marine Research, 14473 Potsdam, Germany
Institute of Biochemistry and Biology, University of Potsdam, 14476
Potsdam, Germany
Institute of Environmental Sciences and Geography, University of
Potsdam, 14476 Potsdam, Germany
Viewed
Total article views: 3,247 (including HTML, PDF, and XML)
Cumulative views and downloads
(calculated since 11 Nov 2019)
| HTML | XML | Total | Supplement | BibTeX | EndNote | |
|---|---|---|---|---|---|---|
| 2,114 | 998 | 135 | 3,247 | 185 | 115 | 129 |
- HTML: 2,114
- PDF: 998
- XML: 135
- Total: 3,247
- Supplement: 185
- BibTeX: 115
- EndNote: 129
Total article views: 2,314 (including HTML, PDF, and XML)
Cumulative views and downloads
(calculated since 07 Sep 2020)
| HTML | XML | Total | Supplement | BibTeX | EndNote | |
|---|---|---|---|---|---|---|
| 1,579 | 654 | 81 | 2,314 | 113 | 66 | 75 |
- HTML: 1,579
- PDF: 654
- XML: 81
- Total: 2,314
- Supplement: 113
- BibTeX: 66
- EndNote: 75
Total article views: 933 (including HTML, PDF, and XML)
Cumulative views and downloads
(calculated since 11 Nov 2019)
| HTML | XML | Total | Supplement | BibTeX | EndNote | |
|---|---|---|---|---|---|---|
| 535 | 344 | 54 | 933 | 72 | 49 | 54 |
- HTML: 535
- PDF: 344
- XML: 54
- Total: 933
- Supplement: 72
- BibTeX: 49
- EndNote: 54
Viewed (geographical distribution)
Total article views: 3,247 (including HTML, PDF, and XML)
Thereof 2,880 with geography defined
and 367 with unknown origin.
Total article views: 2,314 (including HTML, PDF, and XML)
Thereof 2,090 with geography defined
and 224 with unknown origin.
Total article views: 933 (including HTML, PDF, and XML)
Thereof 790 with geography defined
and 143 with unknown origin.
| Country | # | Views | % |
|---|
| Country | # | Views | % |
|---|
| Country | # | Views | % |
|---|
| Total: | 0 |
| HTML: | 0 |
| PDF: | 0 |
| XML: | 0 |
- 1
1
| Total: | 0 |
| HTML: | 0 |
| PDF: | 0 |
| XML: | 0 |
- 1
1
| Total: | 0 |
| HTML: | 0 |
| PDF: | 0 |
| XML: | 0 |
- 1
1
Cited
17 citations as recorded by crossref.
- Predicting the future of coastal marine ecosystems in the rapidly changing Arctic: The potential of palaeoenvironmental records M. Heikkilä et al. 10.1016/j.ancene.2021.100319
- Marine ecosystem shifts with deglacial sea-ice loss inferred from ancient DNA shotgun sequencing H. Zimmermann et al. 10.1038/s41467-023-36845-x
- Recovering short DNA fragments from minerals and marine sediments: A comparative study evaluating lysis and isolation approaches D. Gande et al. 10.1002/edn3.547
- Paleo-diatom composition from Santa Barbara Basin deep-sea sediments: a comparison of 18S-V9 and diat-rbcL metabarcoding vs shotgun metagenomics L. Armbrecht et al. 10.1038/s43705-021-00070-8
- From the Surface Ocean to the Seafloor: Linking Modern and Paleo‐Genetics at the Sabrina Coast, East Antarctica (IN2017_V01) L. Armbrecht et al. 10.1029/2022JG007252
- Vegetation Reconstruction From Siberia and the Tibetan Plateau Using Modern Analogue Technique–Comparing Sedimentary (Ancient) DNA and Pollen Data S. Liu et al. 10.3389/fevo.2021.668611
- Sedimentary ancient DNA sequences reveal marine ecosystem shifts and indicator taxa for glacial-interglacial sea ice conditions D. Grant et al. 10.1016/j.quascirev.2024.108619
- Ancient marine sediment DNA reveals diatom transition in Antarctica L. Armbrecht et al. 10.1038/s41467-022-33494-4
- Plankton community changes during the last 124 000 years in the subarctic Bering Sea derived from sedimentary ancient DNA S. Buchwald et al. 10.1093/ismejo/wrad006
- Sedimentary DNA for tracking the long-term changes in biodiversity H. Li et al. 10.1007/s11356-023-25130-5
- Sedimentary ancient DNA: a new paleogenomic tool for reconstructing the history of marine ecosystems N. Nguyen et al. 10.3389/fmars.2023.1185435
- Marine sedimentary ancient DNA from Antarctic diatoms P. Singh et al. 10.1016/j.palaeo.2024.112090
- Millennial-scale variations in Arctic sea ice are recorded in sedimentary ancient DNA of the microalga Polarella glacialis S. Harðardóttir et al. 10.1038/s43247-023-01179-5
- Taxonomic and abundance biases affect the record of marine eukaryotic plankton communities in sediment DNA archives N. Nguyen et al. 10.1111/1755-0998.14014
- Multiproxy evidence of the Neoglacial expansion of Atlantic Water to eastern Svalbard J. Pawłowska et al. 10.5194/cp-16-487-2020
- Sedimentary Ancient DNA From the Subarctic North Pacific: How Sea Ice, Salinity, and Insolation Dynamics Have Shaped Diatom Composition and Richness Over the Past 20,000 Years H. Zimmermann et al. 10.1029/2020PA004091
- Lake Sedimentary DNA Research on Past Terrestrial and Aquatic Biodiversity: Overview and Recommendations E. Capo et al. 10.3390/quat4010006
14 citations as recorded by crossref.
- Predicting the future of coastal marine ecosystems in the rapidly changing Arctic: The potential of palaeoenvironmental records M. Heikkilä et al. 10.1016/j.ancene.2021.100319
- Marine ecosystem shifts with deglacial sea-ice loss inferred from ancient DNA shotgun sequencing H. Zimmermann et al. 10.1038/s41467-023-36845-x
- Recovering short DNA fragments from minerals and marine sediments: A comparative study evaluating lysis and isolation approaches D. Gande et al. 10.1002/edn3.547
- Paleo-diatom composition from Santa Barbara Basin deep-sea sediments: a comparison of 18S-V9 and diat-rbcL metabarcoding vs shotgun metagenomics L. Armbrecht et al. 10.1038/s43705-021-00070-8
- From the Surface Ocean to the Seafloor: Linking Modern and Paleo‐Genetics at the Sabrina Coast, East Antarctica (IN2017_V01) L. Armbrecht et al. 10.1029/2022JG007252
- Vegetation Reconstruction From Siberia and the Tibetan Plateau Using Modern Analogue Technique–Comparing Sedimentary (Ancient) DNA and Pollen Data S. Liu et al. 10.3389/fevo.2021.668611
- Sedimentary ancient DNA sequences reveal marine ecosystem shifts and indicator taxa for glacial-interglacial sea ice conditions D. Grant et al. 10.1016/j.quascirev.2024.108619
- Ancient marine sediment DNA reveals diatom transition in Antarctica L. Armbrecht et al. 10.1038/s41467-022-33494-4
- Plankton community changes during the last 124 000 years in the subarctic Bering Sea derived from sedimentary ancient DNA S. Buchwald et al. 10.1093/ismejo/wrad006
- Sedimentary DNA for tracking the long-term changes in biodiversity H. Li et al. 10.1007/s11356-023-25130-5
- Sedimentary ancient DNA: a new paleogenomic tool for reconstructing the history of marine ecosystems N. Nguyen et al. 10.3389/fmars.2023.1185435
- Marine sedimentary ancient DNA from Antarctic diatoms P. Singh et al. 10.1016/j.palaeo.2024.112090
- Millennial-scale variations in Arctic sea ice are recorded in sedimentary ancient DNA of the microalga Polarella glacialis S. Harðardóttir et al. 10.1038/s43247-023-01179-5
- Taxonomic and abundance biases affect the record of marine eukaryotic plankton communities in sediment DNA archives N. Nguyen et al. 10.1111/1755-0998.14014
3 citations as recorded by crossref.
- Multiproxy evidence of the Neoglacial expansion of Atlantic Water to eastern Svalbard J. Pawłowska et al. 10.5194/cp-16-487-2020
- Sedimentary Ancient DNA From the Subarctic North Pacific: How Sea Ice, Salinity, and Insolation Dynamics Have Shaped Diatom Composition and Richness Over the Past 20,000 Years H. Zimmermann et al. 10.1029/2020PA004091
- Lake Sedimentary DNA Research on Past Terrestrial and Aquatic Biodiversity: Overview and Recommendations E. Capo et al. 10.3390/quat4010006
Latest update: 13 Dec 2024
Short summary
This study targets high-resolution, diatom-specific sedimentary ancient DNA using a DNA metabarcoding approach. Diatom DNA has been preserved with substantial taxonomic richness in the eastern Fram Strait over the past 30 000 years with taxonomic composition being dominated by cold-water and sea-ice-associated diatoms. Taxonomic reorganisations took place after the Last Glacial Maximum and after the Younger Dryas. Peak proportions of pennate diatoms might indicate past sea-ice presence.
This study targets high-resolution, diatom-specific sedimentary ancient DNA using a DNA...
