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  <front>
    <journal-meta><journal-id journal-id-type="publisher">OS</journal-id><journal-title-group>
    <journal-title>Ocean Science</journal-title>
    <abbrev-journal-title abbrev-type="publisher">OS</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Ocean Sci.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1812-0792</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/os-22-1875-2026</article-id><title-group><article-title>Estuarine mixing</article-title><alt-title>Estuarine mixing</alt-title>
      </title-group>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Burchard</surname><given-names>Hans</given-names></name>
          <email>hans.burchard@iow.de</email>
        <ext-link>https://orcid.org/0000-0001-8288-3932</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Klingbeil</surname><given-names>Knut</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-6736-1260</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Li</surname><given-names>Xiangyu</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-6377-049X</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Reese</surname><given-names>Lloyd</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Geyer</surname><given-names>W. Rockwell</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>Department of Physical Oceanography, Leibniz Institute for Baltic Sea Research Warnemünde, Rostock, Germany</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Department of Applied Physics and Engineering, Woods Hole Oceanographic Institution, Woods Hole, MA, USA</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Hans Burchard (hans.burchard@iow.de)</corresp></author-notes><pub-date><day>22</day><month>June</month><year>2026</year></pub-date>
      
      <volume>22</volume>
      <issue>3</issue>
      <fpage>1875</fpage><lpage>1918</lpage>
      <history>
        <date date-type="received"><day>4</day><month>December</month><year>2025</year></date>
           <date date-type="rev-request"><day>11</day><month>December</month><year>2025</year></date>
           <date date-type="rev-recd"><day>17</day><month>April</month><year>2026</year></date>
           <date date-type="accepted"><day>23</day><month>April</month><year>2026</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2026 Hans Burchard et al.</copyright-statement>
        <copyright-year>2026</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://os.copernicus.org/articles/22/1875/2026/os-22-1875-2026.html">This article is available from https://os.copernicus.org/articles/22/1875/2026/os-22-1875-2026.html</self-uri><self-uri xlink:href="https://os.copernicus.org/articles/22/1875/2026/os-22-1875-2026.pdf">The full text article is available as a PDF file from https://os.copernicus.org/articles/22/1875/2026/os-22-1875-2026.pdf</self-uri>
      <abstract><title>Abstract</title>

      <p id="d2e123">This review paper presents, explains and discusses major aspects of estuarine mixing which is defined as the destruction of salinity variance. Due to the large amounts of brackish water in estuaries produced by mixing of fresh river discharge and salty ocean water, mixing is one major characteristic of what is an estuary. In this review, mixing is quantified locally as well as on estuary-wide scales. Diagnostics of integrated mixing are given for estuarine volumes bounded by transects as well as isohalines (surfaces of constant salinity) moving with the flow. It is shown how entrainment across a moving isohaline surface depends on gradients of turbulent salt flux and mixing per salinity class. Various relations are derived that link estuarine salt mixing to other estuarine properties such as the freshwater discharge and the bulk estuarine circulation. For estuaries bounded towards the ocean by a fixed transect, the Knudsen mixing law is explained, where estuarine mixing is the product of the Knudsen salinities of inflowing and outflowing water masses and the river discharge. When the estuarine volume is bounded by a moving isohaline surface of salinity <inline-formula><mml:math id="M1" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula>, mixing inside the estuary is simply the product of <inline-formula><mml:math id="M2" display="inline"><mml:mrow><mml:msup><mml:mi>S</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> and the river discharge. Major processes that drive estuarine mixing are presented on various time scales (tidal, fortnightly, weather and discharge time scales) and spatial scales (channel-shoal interaction, mixing fronts). As underlying methods for the quantification of mixing, observational concepts, as well as numerical modelling methods such as consistent turbulence closure modelling and numerical mixing analyses are presented. As an outlook, some future perspectives are sketched. Many of the concepts presented in this review are illustrated using simulation results from a numerical model setup of the Elbe River estuary.</p>
  </abstract>
    
<funding-group>
<award-group id="gs1">
<funding-source>Deutsche Forschungsgemeinschaft</funding-source>
<award-id>TRR181</award-id>
</award-group>
<award-group id="gs2">
<funding-source>Bundesministerium für Forschung und Technologie</funding-source>
<award-id>03F0980B</award-id>
<award-id>03F0954F</award-id>
</award-group>
</funding-group>
</article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d2e153">Estuaries are semi-enclosed coastal water bodies where riverine freshwater run-off from land is mixed with offshore salty ocean water to produce brackish water masses of intermediate salinities which are ejected offshore into the coastal ocean. In this sense, estuaries can be characterised as <italic>mixing machines</italic>
<xref ref-type="bibr" rid="bib1.bibx104 bib1.bibx164" id="paren.1"/> with mixing rates far greater than in other parts of the ocean. Salt is the most characteristic constituent that is mixed in estuaries, because of (i) its significantly different concentration between rivers (typically <inline-formula><mml:math id="M3" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula> g kg<sup>−1</sup>) and the adjacent ocean (typically <inline-formula><mml:math id="M5" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">30</mml:mn></mml:mrow></mml:math></inline-formula> g kg<sup>−1</sup>) and (ii) its inert character with no internal sinks and sources and no fluxes through the surface and the bottom. In addition to salt, there is a number of further properties, e.g., nutrients and pollutants, that are distinct between rivers and the ocean and which can be mixed in estuaries. This makes mixing a fundamental process in estuaries. We therefore follow here the definition of an estuary by <xref ref-type="bibr" rid="bib1.bibx129" id="text.2"/> who stated <italic>An estuary is a semi-enclosed coastal body of water which has a free connection with the open sea and within which sea water is measurably diluted with fresh water derived from land drainage.</italic> Instead of <italic>diluted</italic> we would prefer to say <italic>mixed</italic>, which effectively has the same meaning but highlights mixing as the defining process of estuaries. Water bodies that follow this principle are classical estuaries in the sense that their functioning is based on a net freshwater water supply. The contrasting case is given by inverse estuaries that are based on a net freshwater deficit due to evaporation, leading to the export of hypersaline water masses. The present review focusses on classical estuaries (in the following just denoted as <italic>estuaries</italic> for simplicity), whereas <italic>inverse estuaries</italic> are only occasionally discussed as contrasting systems. Fundamental concepts of estuaries and estuarine circulation have already been covered by previous reviews <xref ref-type="bibr" rid="bib1.bibx106 bib1.bibx44" id="paren.3"/>, such that we here focus on mixing in estuaries and its physical and ecological consequences.</p>
      <p id="d2e229">Much of the estuarine literature focusses on mixing, starting with Knudsen’s classic paper <xref ref-type="bibr" rid="bib1.bibx80" id="paren.4"/>, in which he states: <italic>As the freshwater spreads out over the seawater it mixes with it so that the salinity of the surface increases seawards</italic> <xref ref-type="bibr" rid="bib1.bibx18" id="paren.5"><named-content content-type="pre">translation by</named-content></xref>.  Fischer’s review <xref ref-type="bibr" rid="bib1.bibx37" id="paren.6"/> is entitled <italic>Mixing and dispersion in estuaries</italic>, highlighting its fundamental importance.  Notwithstanding the attention focused on mixing throughout the estuarine literature, the actual meaning of the term <italic> mixing</italic> has often been vague or ambiguous: everyone is familiar with mixing via the daily-life experience of pouring milk into a cup of tea and using a tea spoon to mix it. However, amid the complex and multi-scale processes in estuaries, that simple concept is overwhelmed by consideration of larger scale processes associated with turbulence, shear dispersion and buoyancy flux. Turbulence, diffusion, dispersion, buoyancy flux and mixing are often loosely treated as synonyms, leading to confusion as to what we mean by mixing.</p>
      <p id="d2e253">In this review, we come back to mixing in a cup (or glass beaker), or more precisely to the thermodynamic definition of mixing, which is the destruction of variance of some scalar quantity <xref ref-type="bibr" rid="bib1.bibx48" id="paren.7"/>.  In the estuarine context, we focus on the destruction of salinity variance, which is defined in the oceanic turbulence literature as <inline-formula><mml:math id="M7" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, due to the down-gradient diffusion of salt by molecular diffusivity

          <disp-formula id="Ch1.E1" content-type="numbered"><label>1</label><mml:math id="M8" display="block"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">κ</mml:mi><mml:mfenced open="[" close="]"><mml:mrow><mml:msup><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfenced></mml:mrow></mml:math></disp-formula>

        <xref ref-type="bibr" rid="bib1.bibx117 bib1.bibx13" id="paren.8"/>. In Eq. (<xref ref-type="disp-formula" rid="Ch1.E1"/>), <inline-formula><mml:math id="M9" display="inline"><mml:mi mathvariant="italic">κ</mml:mi></mml:math></inline-formula> is the molecular diffusivity of salt, <inline-formula><mml:math id="M10" display="inline"><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover></mml:math></inline-formula> is the turbulent salinity fluctuation, and square brackets denote Reynolds averaging (see Sect. <xref ref-type="sec" rid="Ch1.S2.SS1"/> for details). In the turbulent environments of estuaries, this molecular process occurs at sub-millimetre scales, but it is the direct result of the turbulent and shearing motions acting on the salinity gradients at a wide range of scales extending all the way up to the horizontal dimensions of estuaries. It should be noted that the process of molecular mixing is irreversible inside the water body, such that <inline-formula><mml:math id="M11" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>≥</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>. Negative mixing or <italic>un-mixing</italic> can however occur at the sea surface when evaporation takes place <xref ref-type="bibr" rid="bib1.bibx173 bib1.bibx76" id="paren.9"/> or sea ice is produced due to freezing <xref ref-type="bibr" rid="bib1.bibx120" id="paren.10"/> and in desalination plants to extract freshwater from salt water <xref ref-type="bibr" rid="bib1.bibx72" id="paren.11"><named-content content-type="pre">reverse osmosis,</named-content></xref>. In numerical models, <italic>un-mixing</italic> can also occur due to discretisation errors of advection schemes <xref ref-type="bibr" rid="bib1.bibx57" id="paren.12"/>. Maintaining the strict thermodynamic definition of mixing turns out to be a powerful approach to examining estuarine processes, because salinity variance can be defined locally, as is often done in the turbulence literature, as well as globally, at the overall scale of the estuary. We do not question the importance of other concepts, such as vertical buoyancy flux and horizontal dispersion, but in this review we retain the strict definition of mixing to explore the processes responsible for its occurrence in estuaries as well as its quantitative relationship to estuarine exchange flow.</p>
      <p id="d2e411">Throughout this review, exemplary data from a numerical simulation of the Elbe River estuary in northern Germany are used to demonstrate the different mixing theories. The Elbe River estuary is an elongated meso-tidal estuary with one major discharge source at the landward end for which several studies of estuarine mixing have been carried out <xref ref-type="bibr" rid="bib1.bibx135 bib1.bibx136 bib1.bibx22" id="paren.13"/>. A brief introduction into the Elbe River estuary is given in Appendix <xref ref-type="sec" rid="App1.Ch1.S3"/>.</p>
      <p id="d2e420">This review is structured as follows: After this introduction into the topic of estuarine mixing (Sect. <xref ref-type="sec" rid="Ch1.S1"/>), the existing theories on estuarine mixing are defined and discussed (Sect. <xref ref-type="sec" rid="Ch1.S2"/>). This section is structured into micro-structure mixing (Sect. <xref ref-type="sec" rid="Ch1.S2.SS1"/>) and parameterised mixing (Sect. <xref ref-type="sec" rid="Ch1.S2.SS2"/>), where Reynolds decomposition and turbulence closure assumptions are applied. The mixing definitions from Sect. <xref ref-type="sec" rid="Ch1.S2"/> as well as the  Total Exchange Flow analysis framework (Sect. <xref ref-type="sec" rid="Ch1.S3.SS2"/>) will be used in Sect. <xref ref-type="sec" rid="Ch1.S3"/> (Estuarine Circulation and Mixing) to quantify mixing in entire estuaries. Before discussing estuarine mixing, we give a brief introduction to estuarine hydrodynamics (Sect. <xref ref-type="sec" rid="Ch1.S3.SS1"/>). For the mixing quantification, we first present the theory using fixed transects (Knudsen theories, see Sect. <xref ref-type="sec" rid="Ch1.S3.SS3"/>). Water Mass Transformation (WMT) theories (Sect. <xref ref-type="sec" rid="Ch1.S3.SS4"/>) are explained from which mixing laws for estuarine volumes bounded by isohaline surfaces as the seaward boundary are derived (Sect. <xref ref-type="sec" rid="Ch1.S3.SS5"/>).  Section <xref ref-type="sec" rid="Ch1.S3"/> concludes with some remarks on the relation between estuarine mixing and estuarine circulation (Sect. <xref ref-type="sec" rid="Ch1.S3.SS6"/>) and mixing of constituents other than salt (Sect. <xref ref-type="sec" rid="Ch1.S3.SS7"/>). While Sects. <xref ref-type="sec" rid="Ch1.S2"/> and <xref ref-type="sec" rid="Ch1.S3"/> focus on the definition and discussion of mixing, Sect. <xref ref-type="sec" rid="Ch1.S4"/> gives examples for the most important estuarine processes that drive mixing. Those processes are related to single tides (Sect. <xref ref-type="sec" rid="Ch1.S4.SS1.SSS1"/>), the spring-neap cycle (Sect. <xref ref-type="sec" rid="Ch1.S4.SS1.SSS2"/>), time scales of river discharge and meteorological forcing (Sect. <xref ref-type="sec" rid="Ch1.S4.SS1.SSS3"/>), channel-shoal interaction (Sect. <xref ref-type="sec" rid="Ch1.S4.SS2.SSS1"/>) and mixing at fronts (Sect. <xref ref-type="sec" rid="Ch1.S4.SS2.SSS2"/>). As methods to help quantifying mixing in estuaries, techniques to observe estuarine mixing are introduced  (Sect. <xref ref-type="sec" rid="Ch1.S5.SS1"/>) and numerical modelling techniques are presented (Sect. <xref ref-type="sec" rid="Ch1.S5.SS2"/>), with a focus on turbulence closure modelling (Sect. <xref ref-type="sec" rid="Ch1.S5.SS2.SSS1"/>) and numerical mixing (Sect. <xref ref-type="sec" rid="Ch1.S5.SS2.SSS2"/>). Finally, some future perspectives are discussed in Sect. <xref ref-type="sec" rid="Ch1.S6"/>. The extensive appendix contains details about an analytic illustrative example for small-scale mixing (Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/>), some key budget equations related to salinity variance (Appendix <xref ref-type="sec" rid="App1.Ch1.S2"/>), information about the Elbe River estuary model used to provide estuarine mixing examples (Appendix <xref ref-type="sec" rid="App1.Ch1.S3"/>), a derivation of the coordinate transformation of the vertical salinity equation (Appendix <xref ref-type="sec" rid="App1.Ch1.S4"/>), an explanation for the calibration of two-equation turbulence closure models (Appendix <xref ref-type="sec" rid="App1.Ch1.S5"/>), and derivations for the numerical mixing example (Appendix <xref ref-type="sec" rid="App1.Ch1.S6"/>). At the end of the Appendix, a table with the most important variables, their definitions, units and defining equations is presented (Table <xref ref-type="table" rid="TF1b"/>).</p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Quantification of mixing</title>
      <p id="d2e504">While mixing occurs on the micro-scale only, its integral effects are most prominently effective on the large, estuarine scale. We therefore start our explanations with the quantification of local stirring and mixing. This will first be based on molecular diffusion on the micro-scale and Reynolds averaging on the macro-scale (Sect. <xref ref-type="sec" rid="Ch1.S2.SS1"/>) and then parameterised by means of turbulence closures as it would be calculated in numerical models of estuaries (Sect. <xref ref-type="sec" rid="Ch1.S2.SS2"/>).</p>
<sec id="Ch1.S2.SS1">
  <label>2.1</label><title>Micro-structure mixing</title>
      <p id="d2e518">Mixing of a tracer <inline-formula><mml:math id="M12" display="inline"><mml:mi>s</mml:mi></mml:math></inline-formula> (for which we use salinity here as an example) occurs at the micro-scale when tracer gradients are reduced by molecular diffusion, following the Fickian law,

            <disp-formula id="Ch1.E2" content-type="numbered"><label>2</label><mml:math id="M13" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">ˇ</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mo>∂</mml:mo><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>u</mml:mi><mml:mo mathvariant="normal">ˇ</mml:mo></mml:mover><mml:mi>j</mml:mi></mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">ˇ</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mi mathvariant="italic">κ</mml:mi><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">ˇ</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          where the Einstein summation convention <inline-formula><mml:math id="M14" display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:msub><mml:mi>b</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msubsup><mml:mo>∑</mml:mo><mml:mrow><mml:mi>j</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mn mathvariant="normal">3</mml:mn></mml:msubsup><mml:msub><mml:mi>a</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:msub><mml:mi>b</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi>a</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:msub><mml:mi>b</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi>a</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msub><mml:mi>b</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi>a</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:msub><mml:mi>b</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> has been applied. In Eq. (<xref ref-type="disp-formula" rid="Ch1.E2"/>), <inline-formula><mml:math id="M15" display="inline"><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">ˇ</mml:mo></mml:mover></mml:math></inline-formula> is the instantaneous tracer concentration <inline-formula><mml:math id="M16" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">ˇ</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mo>[</mml:mo><mml:mi>s</mml:mi><mml:mo>]</mml:mo><mml:mo>+</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover></mml:mrow></mml:math></inline-formula> with the Reynolds-averaged tracer concentration <inline-formula><mml:math id="M17" display="inline"><mml:mrow><mml:mo>[</mml:mo><mml:mi>s</mml:mi><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> and the fluctuating component <inline-formula><mml:math id="M18" display="inline"><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover></mml:math></inline-formula>, <inline-formula><mml:math id="M19" display="inline"><mml:mi mathvariant="italic">κ</mml:mi></mml:math></inline-formula> is the molecular diffusivity of salinity, and <inline-formula><mml:math id="M20" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi>u</mml:mi><mml:mo mathvariant="normal">ˇ</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>u</mml:mi><mml:mo mathvariant="normal">ˇ</mml:mo></mml:mover><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M21" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi>v</mml:mi><mml:mo mathvariant="normal">ˇ</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>u</mml:mi><mml:mo mathvariant="normal">ˇ</mml:mo></mml:mover><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> are the horizontal and <inline-formula><mml:math id="M22" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi>w</mml:mi><mml:mo mathvariant="normal">ˇ</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>u</mml:mi><mml:mo mathvariant="normal">ˇ</mml:mo></mml:mover><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is the vertical velocity component. The terms in the brackets on the left hand side of Eq. (<xref ref-type="disp-formula" rid="Ch1.E2"/>) are the advective and the molecular diffusive fluxes, the divergence of which determines the change of the salinity distribution. This transport equation determines the salinity distribution on all scales ranging from the sub-millimetre scales of molecular diffusion to the global scales of meridional overturning circulation, including scales of estuarine mixing.</p>
      <p id="d2e817">In turbulence theory, the Reynolds average (also called ensemble average) is defined as the average of an infinite number of macroscopically identical but microscopically different flow realisations, where the turbulent random fluctuations are averaged out <xref ref-type="bibr" rid="bib1.bibx88" id="paren.14"/>. Consequently, <inline-formula><mml:math id="M23" display="inline"><mml:mrow><mml:mo>[</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>]</mml:mo><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>. In estuarine physics, and similarly in most fields of larger-scale oceanography, the Reynolds-averaged rather than the instantaneous properties of the flow are considered. Field observations of tracer concentrations (e.g., from Conductivity-Temperature-Depth (CTD) probes) as well as numerical model results are supposed to represent Reynolds-averaged quantities. A continuity equation (incompressibility condition) is used in most ocean models:

            <disp-formula id="Ch1.E3" content-type="numbered"><label>3</label><mml:math id="M24" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>u</mml:mi><mml:mo mathvariant="normal">ˇ</mml:mo></mml:mover><mml:mi>i</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:mspace width="1em" linebreak="nobreak"/><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>[</mml:mo><mml:msub><mml:mi>u</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>]</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="1em"/><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>u</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mi>i</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          applying to instantaneous and thus to Reynolds-averaged and fluctuating velocity fields. Using Eq. (<xref ref-type="disp-formula" rid="Ch1.E2"/>), a dynamic equation for the Reynolds-averaged salinity can be derived:

            <disp-formula id="Ch1.E4" content-type="numbered"><label>4</label><mml:math id="M25" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>[</mml:mo><mml:mi>s</mml:mi><mml:mo>]</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mo>∂</mml:mo><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mfenced close=")" open="("><mml:mrow><mml:mo>[</mml:mo><mml:msub><mml:mi>u</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>]</mml:mo><mml:mo>[</mml:mo><mml:mi>s</mml:mi><mml:mo>]</mml:mo><mml:mo>+</mml:mo><mml:mo>[</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>u</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mi>j</mml:mi></mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>]</mml:mo><mml:mo>-</mml:mo><mml:mi mathvariant="italic">κ</mml:mi><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>[</mml:mo><mml:mi>s</mml:mi><mml:mo>]</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          with the advective tracer flux <inline-formula><mml:math id="M26" display="inline"><mml:mrow><mml:mo>[</mml:mo><mml:msub><mml:mi>u</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>]</mml:mo><mml:mo>[</mml:mo><mml:mi>s</mml:mi><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>, the turbulent tracer flux <inline-formula><mml:math id="M27" display="inline"><mml:mrow><mml:mo>[</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>u</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mi>j</mml:mi></mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> and the diffusive tracer flux <inline-formula><mml:math id="M28" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mi mathvariant="italic">κ</mml:mi><mml:mo>∂</mml:mo><mml:mo>[</mml:mo><mml:mi>s</mml:mi><mml:mo>]</mml:mo><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. Based on Eq. (<xref ref-type="disp-formula" rid="Ch1.E2"/>), it is also possible to derive an equation for the micro-structure tracer variance <inline-formula><mml:math id="M29" display="inline"><mml:mrow><mml:mo>[</mml:mo><mml:msup><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>:

            <disp-formula id="Ch1.E5" content-type="numbered"><label>5</label><mml:math id="M30" display="block"><mml:mtable class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mfenced open="[" close="]"><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfenced></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mo>∂</mml:mo><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mfenced close=")" open="("><mml:mrow><mml:mfenced open="[" close="]"><mml:mrow><mml:msub><mml:mi>u</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mfenced open="[" close="]"><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfenced><mml:mo>+</mml:mo><mml:mfenced close="]" open="["><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>u</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mi>j</mml:mi></mml:msub><mml:msup><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfenced><mml:mo>-</mml:mo><mml:mi mathvariant="italic">κ</mml:mi><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>[</mml:mo><mml:msup><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>]</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>=</mml:mo><mml:munder><mml:munder class="underbrace"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>[</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>u</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mi>j</mml:mi></mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mo>]</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>[</mml:mo><mml:mi>s</mml:mi><mml:mo>]</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:munder><mml:mo>-</mml:mo><mml:munder><mml:munder class="underbrace"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">κ</mml:mi><mml:mfenced close="]" open="["><mml:mrow><mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfenced></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:munder></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

          <xref ref-type="bibr" rid="bib1.bibx112" id="paren.15"><named-content content-type="pre">see, e.g., Eq. (5) by</named-content></xref>. In Eq. (<xref ref-type="disp-formula" rid="Ch1.E5"/>), <inline-formula><mml:math id="M31" display="inline"><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> quantifies the production of micro-structure variance due to turbulent stirring (with the Reynolds-averaged tracer gradient vector <inline-formula><mml:math id="M32" display="inline"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>[</mml:mo><mml:mi>s</mml:mi><mml:mo>]</mml:mo><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) and <inline-formula><mml:math id="M33" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> represents destruction of microstructure variance due to molecular mixing.</p>
      <p id="d2e1393">Multiplying Eq. (<xref ref-type="disp-formula" rid="Ch1.E4"/>) by <inline-formula><mml:math id="M34" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>[</mml:mo><mml:mi>s</mml:mi><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> gives a transport equation for the square of the Reynolds-averaged tracer:

            <disp-formula id="Ch1.E6" content-type="numbered"><label>6</label><mml:math id="M35" display="block"><mml:mtable class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>[</mml:mo><mml:mi>s</mml:mi><mml:msup><mml:mo>]</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mo>∂</mml:mo><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mfenced open="(" close=")"><mml:mrow><mml:mo>[</mml:mo><mml:msub><mml:mi>u</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>]</mml:mo><mml:mo>[</mml:mo><mml:mi>s</mml:mi><mml:msup><mml:mo>]</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>[</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>u</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mi>j</mml:mi></mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>]</mml:mo><mml:mo>[</mml:mo><mml:mi>s</mml:mi><mml:mo>]</mml:mo><mml:mo>-</mml:mo><mml:mi mathvariant="italic">κ</mml:mi><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>[</mml:mo><mml:mi>s</mml:mi><mml:msup><mml:mo>]</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>=</mml:mo><mml:munder><mml:munder class="underbrace"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>[</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>u</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mi>j</mml:mi></mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mo>]</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>[</mml:mo><mml:mi>s</mml:mi><mml:mo>]</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mrow><mml:mo>-</mml:mo><mml:msub><mml:mi>P</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:munder><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">κ</mml:mi><mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>[</mml:mo><mml:mi>s</mml:mi><mml:mo>]</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

          where on the right-hand side the stirring term <inline-formula><mml:math id="M36" display="inline"><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> appears as a sink term besides a destruction term due to molecular diffusivity. In contrast to Eq. (<xref ref-type="disp-formula" rid="Ch1.E5"/>), where the destruction of micro-structure variance occurs due to molecular diffusivity acting on micro-structure gradients <inline-formula><mml:math id="M37" display="inline"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, in Eq. (<xref ref-type="disp-formula" rid="Ch1.E6"/>) the molecular diffusivity acts on the much smaller Reynolds-averaged gradient <inline-formula><mml:math id="M38" display="inline"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>[</mml:mo><mml:mi>s</mml:mi><mml:mo>]</mml:mo><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> such that this term is generally negligible. This means that variance is first transferred from the Reynolds-averaged regime of Eq. (<xref ref-type="disp-formula" rid="Ch1.E6"/>) to the turbulent regime Eq. (<xref ref-type="disp-formula" rid="Ch1.E5"/>), where it is then dissipated. In turbulence closure modelling typically <inline-formula><mml:math id="M39" display="inline"><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx112" id="paren.16"><named-content content-type="pre">see, e.g., Eq. (31) by</named-content></xref> is applied such that stirring equals mixing, following a local equilibrium assumption. More details on turbulence closure modelling suitable for estuaries are given in Sect. <xref ref-type="sec" rid="Ch1.S5.SS2"/>.</p>

      <fig id="F1" specific-use="star"><label>Figure 1</label><caption><p id="d2e1712">Stirring and mixing in a glass beaker: <bold>(a)</bold> Evolution of salinity <inline-formula><mml:math id="M40" display="inline"><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">ˇ</mml:mo></mml:mover></mml:math></inline-formula> for the case of no stirring, <bold>(b)</bold> little stirring, and <bold>(c)</bold> strong stirring. The initial distribution after the stirring is shown as blue lines, and the distribution after 10 min is shown as red lines. The parameters for the problem are chosen as height of fluid inside the one-dimensional glass beaker <inline-formula><mml:math id="M41" display="inline"><mml:mrow><mml:mi>D</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.1</mml:mn></mml:mrow></mml:math></inline-formula> m, and the molecular diffusivity of salinity, <inline-formula><mml:math id="M42" display="inline"><mml:mrow><mml:mi mathvariant="italic">κ</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">9</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> m<sup>2</sup> s<sup>−1</sup>. The two black bars mark the area over which the local variance is estimated. More details are given in Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/> . </p></caption>
          <graphic xlink:href="https://os.copernicus.org/articles/22/1875/2026/os-22-1875-2026-f01.png"/>

        </fig>

      <p id="d2e1794">In short: micro-structure tracer variance is produced by stirring <inline-formula><mml:math id="M45" display="inline"><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (increase of local micro-structure gradients due to turbulent eddies) and dissipated by mixing <inline-formula><mml:math id="M46" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, while the divergence term on the left-hand side just spatially redistributes the micro-structure tracer variance. Note that the stirring term is twice the product of the turbulent flux times the Reynolds-averaged tracer gradient. The stirring term <inline-formula><mml:math id="M47" display="inline"><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is typically positive, since the Reynolds-averaged salinity gradient and the turbulent salt flux have opposite signs due to the generally down-gradient property of turbulent fluxes <xref ref-type="bibr" rid="bib1.bibx85" id="paren.17"><named-content content-type="pre">classical exceptions occur in convective boundary layers, see e.g.</named-content></xref>.</p>
      <p id="d2e1835">This can be explained by a laboratory experiment with salt mixing. A simple idealised model of this is given in   Appendix  <xref ref-type="sec" rid="App1.Ch1.S1"/> and results are shown in Fig. <xref ref-type="fig" rid="F1"/>. After having carefully pumped saltwater of 30 g kg<sup>−1</sup> underneath freshwater (with some continuous mixing), the local salinity variance is mostly low: sufficiently small control volumes would contain water with a small salinity range (Fig. <xref ref-type="fig" rid="F1"/>a). Introduction of turbulence by means of a spoon will lead to stirring (increase of <inline-formula><mml:math id="M49" display="inline"><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>), such that local control volumes (marked as the area between the two black bars in Fig. <xref ref-type="fig" rid="F1"/>) will contain streaks of saltwater at various ranges, with sharp gradients between them, such that the local variance <inline-formula><mml:math id="M50" display="inline"><mml:mrow><mml:mfenced close="]" open="["><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfenced></mml:mrow></mml:math></inline-formula> is increased. This is demonstrated as initial conditions for moderate stirring (Fig. <xref ref-type="fig" rid="F1"/>b) and strong stirring (Fig. <xref ref-type="fig" rid="F1"/>c). Now, mixing <inline-formula><mml:math id="M51" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> will be moderately or strongly enhanced due to the small (and constant) molecular diffusivity <inline-formula><mml:math id="M52" display="inline"><mml:mi mathvariant="italic">κ</mml:mi></mml:math></inline-formula> acting on the strong micro-scale gradients <inline-formula><mml:math id="M53" display="inline"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:math></inline-formula> (which are squared in the mixing term). At the end of this process, the salt will be almost fully diluted in the water such that local variance becomes small, with <inline-formula><mml:math id="M54" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>→</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M55" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">ˇ</mml:mo></mml:mover><mml:mo>→</mml:mo><mml:mo>[</mml:mo><mml:mi>s</mml:mi><mml:mo>]</mml:mo><mml:mo>=</mml:mo><mml:mn mathvariant="normal">15</mml:mn></mml:mrow></mml:math></inline-formula> g kg<sup>−1</sup>. Further introduction of turbulence by a spoon will not lead to further stirring (and thus not to further mixing), because the tracer gradients have vanished.</p>
      <p id="d2e1978">In real estuaries, stirring typically occurs due to vertical shear instabilities driven by tidal flow, generating large eddies as shown in Figs. <xref ref-type="fig" rid="F17"/> and <xref ref-type="fig" rid="F18"/> in Sect. <xref ref-type="sec" rid="Ch1.S5.SS1"/>. Via the classical turbulence downward cascade, smaller and smaller eddies are generated such that finally mixing is enhanced at the smallest scales. Since estuaries are typically narrow and friction-dominated, horizontal instabilities on the submesoscale <xref ref-type="bibr" rid="bib1.bibx111" id="paren.18"/> play a minor role for stirring. An exception would be large fjord-type estuaries with weak tides such as the Baltic Sea <xref ref-type="bibr" rid="bib1.bibx28" id="paren.19"/>.</p>
      <p id="d2e1993">Direct in-situ measurements of salinity mixing <inline-formula><mml:math id="M57" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are difficult to obtain due to the small value of the molecular salinity diffusivity of <inline-formula><mml:math id="M58" display="inline"><mml:mrow><mml:mi mathvariant="italic">κ</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="script">O</mml:mi><mml:mo>(</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">9</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> m<sup>2</sup> s<inline-formula><mml:math id="M60" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and the consequently strong gradients at small scales, but successful attempts have been reported by <xref ref-type="bibr" rid="bib1.bibx117" id="text.20"/> for locations on the continental shelf. According to these authors the salinity-gradient spectrum peaks at dissipative scales ten times smaller than the temperature-gradient spectrum, such that most salinity variance decay occurs in the sub-millimetre range. Therefore, and because of estuaries having generally higher levels of turbulence than continental shelves, direct observations of <inline-formula><mml:math id="M61" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> in estuaries are not feasible, and indirect observations are needed (see Sect. <xref ref-type="sec" rid="Ch1.S5.SS1"/>). Instead of using turbulence observations, mixing in estuaries is mostly studied by means of well-calibrated fine-resolution numerical models equipped with accurate numerical discretisations and physically based turbulence closures (Sect. <xref ref-type="sec" rid="Ch1.S5.SS2"/>).</p>
</sec>
<sec id="Ch1.S2.SS2">
  <label>2.2</label><title>Mixing at resolved local scales</title>
      <p id="d2e2080">Whereas the irreversible process of mixing happens at very small scales, the quantification of mixing is accomplished both in observations and in models through the application of turbulence closure assumptions <xref ref-type="bibr" rid="bib1.bibx112 bib1.bibx127 bib1.bibx159" id="paren.21"/>. On the level of numerical ocean models, the turbulent fluxes are typically parameterised by means of the eddy diffusivity assumption, resulting in down-gradient turbulent tracer fluxes:

            <disp-formula id="Ch1.E7" content-type="numbered"><label>7</label><mml:math id="M62" display="block"><mml:mrow><mml:mo>[</mml:mo><mml:mover accent="true"><mml:mi>u</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mo>]</mml:mo><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>;</mml:mo><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>[</mml:mo><mml:mover accent="true"><mml:mi>v</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>]</mml:mo><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>;</mml:mo><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>[</mml:mo><mml:mover accent="true"><mml:mi>w</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>]</mml:mo><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          now using salinity <inline-formula><mml:math id="M63" display="inline"><mml:mrow><mml:mi>s</mml:mi><mml:mo>=</mml:mo><mml:mo>[</mml:mo><mml:mi>s</mml:mi><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> as Reynolds-averaged tracer concentration. In Eq. (<xref ref-type="disp-formula" rid="Ch1.E7"/>), <inline-formula><mml:math id="M64" display="inline"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the horizontal eddy diffusivity and <inline-formula><mml:math id="M65" display="inline"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the vertical eddy diffusivity. With this the Reynolds-averaged salinity budget equation Eq. (<xref ref-type="disp-formula" rid="Ch1.E4"/>) becomes:

            <disp-formula id="Ch1.E8" content-type="numbered"><label>8</label><mml:math id="M66" display="block"><mml:mtable rowspacing="0.2ex" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:munder><mml:munder class="underbrace"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mtext>change</mml:mtext></mml:munder><mml:mo>+</mml:mo><mml:munder><mml:munder class="underbrace"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>(</mml:mo><mml:mi>u</mml:mi><mml:mi>s</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>(</mml:mo><mml:mi>v</mml:mi><mml:mi>s</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>(</mml:mo><mml:mi>w</mml:mi><mml:mi>s</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mtext>advection</mml:mtext></mml:munder></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:munder><mml:munder class="underbrace"><mml:mrow><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mo>∂</mml:mo><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mo>∂</mml:mo><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mo>∂</mml:mo><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mtext>diffusion</mml:mtext></mml:munder><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

          showing that salinity changes are exclusively determined by the divergence of advective and turbulent fluxes. Note that in Eq. (<xref ref-type="disp-formula" rid="Ch1.E8"/>) molecular tracer fluxes have been neglected. With Eq. (<xref ref-type="disp-formula" rid="Ch1.E7"/>) the production of micro-structure variance due to stirring becomes

            <disp-formula id="Ch1.E9" content-type="numbered"><label>9</label><mml:math id="M67" display="block"><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mover><mml:mo>=</mml:mo><mml:mo>!</mml:mo></mml:mover><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          where in the last step stirring and mixing of micro-structure salinity variance are set equal, which is a typical assumption in turbulence closure modelling (see Sect. <xref ref-type="sec" rid="Ch1.S2.SS1"/>). The local variance decay <inline-formula><mml:math id="M68" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is used as a local measure for the mixing of Reynolds-averaged salinity <xref ref-type="bibr" rid="bib1.bibx13" id="paren.22"/>. This local equilibrium assumption is generally valid on the temporal and spatial scales that are resolved by numerical ocean models. In detail, <inline-formula><mml:math id="M69" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> appears as a sink term in both the salinity variance and salinity-square budgets. The corresponding derivation is shown in     Appendix <xref ref-type="sec" rid="App1.Ch1.S2"/>.</p>
      <p id="d2e2586">In estuaries, the vertical term of the salinity variance decay Eq. (<xref ref-type="disp-formula" rid="Ch1.E9"/>) typically dominates over the horizontal terms due to the dominance of tidally-driven vertical shear <xref ref-type="bibr" rid="bib1.bibx95" id="paren.23"/>, such that we obtain

            <disp-formula id="Ch1.E10" content-type="numbered"><label>10</label><mml:math id="M70" display="block"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>≈</mml:mo><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mrow><mml:mi mathvariant="normal">s</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">v</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>

          This is the case because in estuaries horizontal turbulent transports and their divergences are small compared to the vertical transports, with the consequence that in estuarine models the horizontal diffusion is often neglected in the parameterised salinity budget equation Eq. (<xref ref-type="disp-formula" rid="Ch1.E8"/>) as well as in the salinity variance equation Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S2.E47"/>). Due to this dominance of vertical processes in estuaries, it is instructive to study the balance of the vertical variance,

            <disp-formula id="Ch1.E11" content-type="numbered"><label>11</label><mml:math id="M71" display="block"><mml:mrow><mml:msup><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">v</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:mi>s</mml:mi><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:mi mathvariant="italic">η</mml:mi><mml:mo>+</mml:mo><mml:mi>H</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:munderover><mml:mo movablelimits="false">∫</mml:mo><mml:mrow><mml:mo>-</mml:mo><mml:mi>H</mml:mi></mml:mrow><mml:mi mathvariant="italic">η</mml:mi></mml:munderover><mml:mi>s</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mtext>d</mml:mtext><mml:mi>z</mml:mi></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:mi>s</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">¯</mml:mo></mml:mover><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          for the vertical integral of which the following budget equation can be derived from Eq. (<xref ref-type="disp-formula" rid="Ch1.E8"/>), see <xref ref-type="bibr" rid="bib1.bibx93" id="text.24"/> for details:

            <disp-formula id="Ch1.E12" content-type="numbered"><label>12</label><mml:math id="M72" display="block"><mml:mtable class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:munder><mml:munder class="underbrace"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mo>∂</mml:mo><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:munderover><mml:mo movablelimits="false">∫</mml:mo><mml:mrow><mml:mo>-</mml:mo><mml:mi>H</mml:mi></mml:mrow><mml:mi mathvariant="italic">η</mml:mi></mml:munderover><mml:msup><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">v</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mtext>d</mml:mtext><mml:mi>z</mml:mi></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mtext>rate of change</mml:mtext></mml:munder><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mspace width="0.125em" linebreak="nobreak"/><mml:munder><mml:munder class="underbrace"><mml:mrow><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mo>∂</mml:mo><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:munderover><mml:mo movablelimits="false">∫</mml:mo><mml:mrow><mml:mo>-</mml:mo><mml:mi>H</mml:mi></mml:mrow><mml:mi mathvariant="italic">η</mml:mi></mml:munderover><mml:mi>u</mml:mi><mml:msup><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">v</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mtext>d</mml:mtext><mml:mi>z</mml:mi><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mo>∂</mml:mo><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:munderover><mml:mo movablelimits="false">∫</mml:mo><mml:mrow><mml:mo>-</mml:mo><mml:mi>H</mml:mi></mml:mrow><mml:mi mathvariant="italic">η</mml:mi></mml:munderover><mml:mi>v</mml:mi><mml:msup><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">v</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mtext>d</mml:mtext><mml:mi>z</mml:mi></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mtext> advection</mml:mtext></mml:munder></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>=</mml:mo><mml:munder><mml:munder class="underbrace"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:munderover><mml:mo movablelimits="false">∫</mml:mo><mml:mrow><mml:mo>-</mml:mo><mml:mi>H</mml:mi></mml:mrow><mml:mi mathvariant="italic">η</mml:mi></mml:munderover><mml:msubsup><mml:mi>u</mml:mi><mml:mi>v</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">v</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">¯</mml:mo></mml:mover><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mtext>d</mml:mtext><mml:mi>z</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:munderover><mml:mo movablelimits="false">∫</mml:mo><mml:mrow><mml:mo>-</mml:mo><mml:mi>H</mml:mi></mml:mrow><mml:mi mathvariant="italic">η</mml:mi></mml:munderover><mml:msubsup><mml:mi>v</mml:mi><mml:mi mathvariant="normal">v</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">v</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">¯</mml:mo></mml:mover><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mtext>d</mml:mtext><mml:mi>z</mml:mi></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mtext>horizontal straining</mml:mtext></mml:munder></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>-</mml:mo><mml:munder><mml:munder class="underbrace"><mml:mrow><mml:munderover><mml:mo movablelimits="false">∫</mml:mo><mml:mrow><mml:mo>-</mml:mo><mml:mi>H</mml:mi></mml:mrow><mml:mi mathvariant="italic">η</mml:mi></mml:munderover><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mrow><mml:mi mathvariant="normal">s</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">v</mml:mi></mml:mrow></mml:msub><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mtext>d</mml:mtext><mml:mi>z</mml:mi></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mtext>vertical mixing</mml:mtext></mml:munder><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

          where <inline-formula><mml:math id="M73" display="inline"><mml:mi mathvariant="italic">η</mml:mi></mml:math></inline-formula> is the surface elevation. Equation (<xref ref-type="disp-formula" rid="Ch1.E12"/>) shows that the vertical variance balance is time-dependent and spatially variable. In contrast to the total salinity variance budget, the vertical salinity variance budget has source terms, the so-called horizontal straining terms, representing the conversion of horizontal variance (<inline-formula><mml:math id="M74" display="inline"><mml:mrow><mml:msup><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">h</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>, where <inline-formula><mml:math id="M75" display="inline"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">h</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>=</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">tot</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">v</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>=</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">¯</mml:mo></mml:mover><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">¯</mml:mo></mml:mover><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) associated with the horizontal salinity gradient <inline-formula><mml:math id="M76" display="inline"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">¯</mml:mo></mml:mover><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:math></inline-formula> to vertical variance <xref ref-type="bibr" rid="bib1.bibx147" id="paren.25"/>. Note that horizontal straining is split into longitudinal straining and lateral straining (first and second term of horizontal straining, respectively) and can be a source (mainly during ebb straining) and a sink (mainly during flood straining) of vertical variance, whereas the effect of vertical mixing is always to reduce the vertical variance. According to <xref ref-type="bibr" rid="bib1.bibx93" id="text.26"/>, estuarine mixing is driven in a three-step process: First, horizontal variance is provided to the estuary by means of boundary variance transports from the river and the ocean, through the <italic>boundary transport</italic> term in Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S2.E48"/>). Then the <italic>horizontal straining</italic> term in Eq. (<xref ref-type="disp-formula" rid="Ch1.E12"/>) converts horizontal variance into vertical variance, which is then in a third step mixed away by the <italic>vertical mixing</italic> term in Eq. (<xref ref-type="disp-formula" rid="Ch1.E12"/>).</p>
</sec>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Estuarine circulation and mixing</title>
      <p id="d2e3155">After a short introduction into the basics of estuarine hydrodynamics in Sect. <xref ref-type="sec" rid="Ch1.S3.SS1"/>, we here introduce mixing concepts for entire estuaries, first following the classical exchange flow theory proposed by <xref ref-type="bibr" rid="bib1.bibx80" id="text.27"/>, see Sect. <xref ref-type="sec" rid="Ch1.S3.SS3"/>, which can be quantified by using the Total Exchange Flow (TEF) analysis framework across fixed transects (Sect. <xref ref-type="sec" rid="Ch1.S3.SS2"/>). After introducing local isohaline theory (Sect. <xref ref-type="sec" rid="Ch1.S3.SS4"/>), we show how to analyse mixing in estuarine volumes bounded by an isohaline instead of a fixed transect (Sect. <xref ref-type="sec" rid="Ch1.S3.SS5"/>). Based on the local isohaline theory, the quantification of estuarine circulation is directly related to mixing (Sect. <xref ref-type="sec" rid="Ch1.S3.SS6"/>). Finally, mixing of constituents other than salt is briefly discussed (Sect. <xref ref-type="sec" rid="Ch1.S3.SS7"/>). </p>
<sec id="Ch1.S3.SS1">
  <label>3.1</label><title>Basics of estuarine hydrodynamics</title>
      <p id="d2e3184">Although this review paper mainly focusses on estuarine salt mixing, a short introduction into the hydrodynamics determining the salt distribution and the turbulence available for salinity mixing will be given here. More detailed reviews can be found in <xref ref-type="bibr" rid="bib1.bibx106" id="text.28"/> and <xref ref-type="bibr" rid="bib1.bibx44" id="text.29"/>.</p>
      <p id="d2e3193">Estuaries are characterised by a longitudinal salinity gradient extending from the region of the estuarine mouth with values typically close to ocean salinity (somewhat below 35 g kg<sup>−1</sup>) to values of river salinity (typically below 0.5 g kg<sup>−1</sup>) in the freshwater range. Since saline water is more dense than fresh water, this salinity gradient causes a longitudinal density gradient which results in a longitudinal pressure gradient in the momentum balance, with a barotropic and a baroclinic term. While the baroclinic term is zero at the surface and increases continuously towards the bottom (driving water in up-estuarine direction, with intensification at the bottom), the barotropic pressure-gradient term is independent of the vertical position and drives water out of the estuary. In addition oscillating tides provide small-scale turbulence resulting in vertical shear stress divergence and consequently in diffusion of the longitudinal velocity profiles. The combination of these forces results in a gravitationally-driven tidally averaged exchange flow, with near-bottom flow directed in up-estuarine direction and near-surface flow directed in down-estuarine direction, the so-called gravitational circulation. The strength of the stratifying gravitational circulation depends on the ratio of the gravitational forces due to the longitudinal density gradient and the de-stratifying vertical shear stress divergence. This ratio is expressed as the Simpson number

            <disp-formula id="Ch1.E13" content-type="numbered"><label>13</label><mml:math id="M79" display="block"><mml:mrow><mml:mi>S</mml:mi><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msup><mml:mi>D</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>|</mml:mo><mml:msub><mml:mi>b</mml:mi><mml:mi>x</mml:mi></mml:msub><mml:mo>|</mml:mo></mml:mrow><mml:mrow><mml:mfenced open="〈" close="〉"><mml:mrow><mml:msubsup><mml:mi>u</mml:mi><mml:mo>*</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:mfenced></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></disp-formula>

          <xref ref-type="bibr" rid="bib1.bibx147 bib1.bibx113 bib1.bibx151" id="paren.30"/> with the water depth <inline-formula><mml:math id="M80" display="inline"><mml:mi>D</mml:mi></mml:math></inline-formula>, the horizontal buoyancy gradient <inline-formula><mml:math id="M81" display="inline"><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mi>x</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mo>∂</mml:mo><mml:mi>b</mml:mi><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:math></inline-formula>, the buoyancy <inline-formula><mml:math id="M82" display="inline"><mml:mrow><mml:mi>b</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mi>g</mml:mi><mml:mo>/</mml:mo><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ρ</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, the potential density <inline-formula><mml:math id="M83" display="inline"><mml:mi mathvariant="italic">ρ</mml:mi></mml:math></inline-formula>, the reference density <inline-formula><mml:math id="M84" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, the gravitational acceleration <inline-formula><mml:math id="M85" display="inline"><mml:mi>g</mml:mi></mml:math></inline-formula>, and the bottom friction velocity <inline-formula><mml:math id="M86" display="inline"><mml:mrow><mml:msub><mml:mi>u</mml:mi><mml:mo>*</mml:mo></mml:msub></mml:mrow></mml:math></inline-formula>. There are several other hydrodynamic processes contributing to estuarine exchange flow. One essential process is tidal straining <xref ref-type="bibr" rid="bib1.bibx147" id="paren.31"/>: During flood saltier ocean water is sheared over less salty estuarine water, such that the water column becomes statically unstable and thus highly turbulent such that properties are vertically homogenised. During ebb the opposite occurs, resulting in stable stratification and suppression of turbulence. This asymmetry of turbulence does not only affect the salt distribution, but also the velocity profiles: During flood up-estuarine momentum is transported downwards in a much stronger amount than down-estuarine momentum is transported downwards during ebb, which in a tidal average leads to an up-estuarine residual flow near the bottom <xref ref-type="bibr" rid="bib1.bibx70" id="paren.32"/>. This process has also been named ESCO (eddy-viscosity – shear covariance) by <xref ref-type="bibr" rid="bib1.bibx31" id="text.33"/>. In an idealised model study <xref ref-type="bibr" rid="bib1.bibx12" id="text.34"/> showed that in tidally energetic flows the contribution of ESCO to estuarine circulation could be stronger than that of gravitational circulation. Other important hydrodynamic processes generating estuarine circulation are lateral circulation <xref ref-type="bibr" rid="bib1.bibx87" id="paren.35"/>, estuarine convergence <xref ref-type="bibr" rid="bib1.bibx68 bib1.bibx17" id="paren.36"/> and wind straining <xref ref-type="bibr" rid="bib1.bibx144" id="paren.37"/>. It has been shown that gravitational circulation, ESCO, and lateral circulation are strongly scaling with <inline-formula><mml:math id="M87" display="inline"><mml:mrow><mml:mi>S</mml:mi><mml:mi>i</mml:mi></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx16 bib1.bibx82" id="paren.38"/>. Since <inline-formula><mml:math id="M88" display="inline"><mml:mrow><mml:mi>S</mml:mi><mml:mi>i</mml:mi></mml:mrow></mml:math></inline-formula> is larger during neap tide than during spring tide (due to smaller <inline-formula><mml:math id="M89" display="inline"><mml:mrow><mml:msub><mml:mi>u</mml:mi><mml:mo>*</mml:mo></mml:msub></mml:mrow></mml:math></inline-formula>), the estuarine exchange flow is expected to be stronger during neap tide. The estuarine circulation in concert with vertical mixing is a major process carrying salt into the estuary, against the river discharge. Often, this so-called shear dispersion process is parameterised by a horizontal diffusion term in the longitudinal salt balance equation <xref ref-type="bibr" rid="bib1.bibx102" id="paren.39"/>.</p>
      <p id="d2e3423">The Simpson number <inline-formula><mml:math id="M90" display="inline"><mml:mrow><mml:mi>S</mml:mi><mml:mi>i</mml:mi></mml:mrow></mml:math></inline-formula> does also have a strong influence on the stratification in an estuary. For <inline-formula><mml:math id="M91" display="inline"><mml:mrow><mml:mi>S</mml:mi><mml:mi>i</mml:mi><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.2</mml:mn></mml:mrow></mml:math></inline-formula> (tidally energetic), the water column would be mixed throughout the tidal cycle. For <inline-formula><mml:math id="M92" display="inline"><mml:mrow><mml:mi>S</mml:mi><mml:mi>i</mml:mi><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> (weak tidal energy), stratification should be maintained during the entire tidal cycle. For intermediate situations with <inline-formula><mml:math id="M93" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.2</mml:mn><mml:mo>≤</mml:mo><mml:mi>S</mml:mi><mml:mi>i</mml:mi><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>, however, the water column should stratify during ebb and destratify during flood, leading to strain-induced periodic stratification <xref ref-type="bibr" rid="bib1.bibx147 bib1.bibx160" id="paren.40"><named-content content-type="pre">SIPS,</named-content></xref>. Since mixing is typically proportional to the square of the vertical salinity gradient, see Eq. (<xref ref-type="disp-formula" rid="Ch1.E10"/>), stratification has a major impact on estuarine mixing. Specific examples of physical drivers of estuarine mixing are discussed in Sect. <xref ref-type="sec" rid="Ch1.S4"/>.</p>
</sec>
<sec id="Ch1.S3.SS2">
  <label>3.2</label><title>Total Exchange Flow</title>
      <p id="d2e3500">The estuarine exchange flow of water masses defined by salinity, i.e., the net inflow of high salinity ocean waters and the net outflow of low salinity estuarine waters, can be best quantified in terms of time-averaged transports in fixed salinity classes. The resulting Total Exchange Flow (TEF) provides an analysis framework based on salinity coordinates rather than geopotential (<inline-formula><mml:math id="M94" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula>-)coordinates which is consistently linked to the Knudsen theory as well as to estuarine mixing. As shown by several authors <xref ref-type="bibr" rid="bib1.bibx103 bib1.bibx154 bib1.bibx18" id="paren.41"/>, the Eulerian (<inline-formula><mml:math id="M95" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula>-coordinate) framework could be mapped back to time-averaged salinities, but the resulting exchange flow profiles would significantly underestimate the exchange flow. Therefore, the TEF framework has developed into a major research tool for analysing estuarine dynamics. For the Baltic Sea, approaches similar to TEF had already been developed earlier <xref ref-type="bibr" rid="bib1.bibx161 bib1.bibx32" id="paren.42"/>. Here, we briefly explain the theoretical framework for TEF and refer to the literature for the details <xref ref-type="bibr" rid="bib1.bibx103 bib1.bibx18" id="paren.43"/>.  Given a fixed transect T across an estuary, the time-averaged volume, salt and salt-squared transports across the transect for all salinities <inline-formula><mml:math id="M96" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mi>S</mml:mi></mml:mrow></mml:math></inline-formula> are defined as

            <disp-formula id="Ch1.E14" content-type="numbered"><label>14</label><mml:math id="M97" display="block"><mml:mtable class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:mi>Q</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:mfenced close="〉" open="〈"><mml:mrow><mml:munder><mml:mo movablelimits="false">∫</mml:mo><mml:mrow><mml:mi>A</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:munder><mml:mi>u</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mtext>d</mml:mtext><mml:mi>A</mml:mi></mml:mrow></mml:mfenced><mml:mo>,</mml:mo><mml:mspace width="1em" linebreak="nobreak"/><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mfenced open="〈" close="〉"><mml:mrow><mml:munder><mml:mo movablelimits="false">∫</mml:mo><mml:mrow><mml:mi>A</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:munder><mml:mi>u</mml:mi><mml:mi>s</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mtext>d</mml:mtext><mml:mi>A</mml:mi></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mfenced open="〈" close="〉"><mml:mrow><mml:munder><mml:mo movablelimits="false">∫</mml:mo><mml:mrow><mml:mi>A</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:munder><mml:mi>u</mml:mi><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mtext>d</mml:mtext><mml:mi>A</mml:mi></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

          where triangular brackets denote temporal averaging, <inline-formula><mml:math id="M98" display="inline"><mml:mi>u</mml:mi></mml:math></inline-formula> is the velocity normal to the transect (positive when directed into the estuary) and <inline-formula><mml:math id="M99" display="inline"><mml:mrow><mml:mi>A</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is the part of the transect area with instantaneous salinities <inline-formula><mml:math id="M100" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mi>S</mml:mi></mml:mrow></mml:math></inline-formula>. It should be noted that <inline-formula><mml:math id="M101" display="inline"><mml:mrow><mml:mi>Q</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is the streamfunction of the estuarine circulation in salinity space <xref ref-type="bibr" rid="bib1.bibx103 bib1.bibx22" id="paren.44"/>. When defining <inline-formula><mml:math id="M102" display="inline"><mml:mrow><mml:msub><mml:mi>S</mml:mi><mml:mo>max⁡</mml:mo></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M103" display="inline"><mml:mrow><mml:msub><mml:mi>S</mml:mi><mml:mo>min⁡</mml:mo></mml:msub></mml:mrow></mml:math></inline-formula> as the maximum and minimum salinities occurring on the transect during the averaging period, respectively, then sufficiently long averaging results in <inline-formula><mml:math id="M104" display="inline"><mml:mrow><mml:mi>Q</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>S</mml:mi><mml:mo>max⁡</mml:mo></mml:msub><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:msub><mml:mi>S</mml:mi><mml:mo>max⁡</mml:mo></mml:msub><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:msup><mml:mi>S</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:msub><mml:mi>S</mml:mi><mml:mo>max⁡</mml:mo></mml:msub><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>,  <inline-formula><mml:math id="M105" display="inline"><mml:mrow><mml:mi>Q</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>S</mml:mi><mml:mo>min⁡</mml:mo></mml:msub><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (total volume transport equals river discharge) and <inline-formula><mml:math id="M106" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:msub><mml:mi>S</mml:mi><mml:mo>min⁡</mml:mo></mml:msub><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula> (total salt transport vanishes under long-term averaging). The link to mixing is given by <inline-formula><mml:math id="M107" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:msub><mml:mi>S</mml:mi><mml:mo>min⁡</mml:mo></mml:msub><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mi mathvariant="double-struck">M</mml:mi></mml:mrow></mml:math></inline-formula> (total salinity squared transport equals bulk mixing as defined in Eq. 20), see details in <xref ref-type="bibr" rid="bib1.bibx20" id="text.45"/>. These properties of <inline-formula><mml:math id="M108" display="inline"><mml:mrow><mml:mi>Q</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M109" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M110" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> are demonstrated for a cross-channel transect near the mouth of the Elbe River estuary in Fig. <xref ref-type="fig" rid="F2"/>a,c,d, where nearly balanced conditions are given such that the respective deviations from the expected values at <inline-formula><mml:math id="M111" display="inline"><mml:mrow><mml:mi>S</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi>S</mml:mi><mml:mo>min⁡</mml:mo></mml:msub></mml:mrow></mml:math></inline-formula> are small.</p>

      <fig id="F2" specific-use="star"><label>Figure 2</label><caption><p id="d2e3955">TEF analysis using numerical model data from a cross-channel transect at along-channel position <inline-formula><mml:math id="M112" display="inline"><mml:mrow><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">cux</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> at Cuxhaven near the mouth of the Elbe River estuary (see Fig. <xref ref-type="fig" rid="FC1"/>a), averaged for the full month of April 2024. <bold>(a)</bold> Volume transport <inline-formula><mml:math id="M113" display="inline"><mml:mrow><mml:mi>Q</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> across the transect, with the freshwater discharge <inline-formula><mml:math id="M114" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and the dividing salinity <inline-formula><mml:math id="M115" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">div</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> for reference. <bold>(b)</bold> Volume transport per salinity class, <inline-formula><mml:math id="M116" display="inline"><mml:mrow><mml:mi>q</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, as well as the bulk inflow and outflow salinities <inline-formula><mml:math id="M117" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M118" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, respectively. The shaded areas and written numbers correspond to the bulk volume inflow (<inline-formula><mml:math id="M119" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, red) and bulk volume outflow (<inline-formula><mml:math id="M120" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, blue). <bold>(c)</bold> Salinity transport <inline-formula><mml:math id="M121" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>; <bold>(d)</bold> salinity-squared transport <inline-formula><mml:math id="M122" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> across the transect, with the integrated mixing within the estuarine volume bounded by the same transect, <inline-formula><mml:math id="M123" display="inline"><mml:mrow><mml:mi mathvariant="double-struck">M</mml:mi><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">cux</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, for reference. </p></caption>
          <graphic xlink:href="https://os.copernicus.org/articles/22/1875/2026/os-22-1875-2026-f02.png"/>

        </fig>

      <p id="d2e4138">Taking the <inline-formula><mml:math id="M124" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula>-derivative of Eq. (<xref ref-type="disp-formula" rid="Ch1.E14"/>) results in the volume, salinity and salinity-squared transport per salinity class (the Total Exchange Flow, TEF),

            <disp-formula id="Ch1.E15" content-type="numbered"><label>15</label><mml:math id="M125" display="block"><mml:mtable rowspacing="0.2ex" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:mi>q</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>Q</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>S</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo><mml:mspace width="1em" linebreak="nobreak"/><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>S</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:msub><mml:mi>q</mml:mi><mml:mrow><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>S</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

          where the minus sign ensures that inflow at high salinities is positive to highlight the character of the exchange flow. The connection to the Knudsen relations Eqs. (<xref ref-type="disp-formula" rid="Ch1.E18"/>), (<xref ref-type="disp-formula" rid="Ch1.E21"/>) and (<xref ref-type="disp-formula" rid="Ch1.E22"/>) is given by separately integrating the positive and negative contributions (denoted by superscripts <sup>+</sup> and <sup>−</sup>) of the transport per salinity class,

            <disp-formula id="Ch1.E16" content-type="numbered"><label>16</label><mml:math id="M128" display="block"><mml:mrow><mml:mtable class="array" columnalign="left left"><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:munderover><mml:mo movablelimits="false">∫</mml:mo><mml:mrow><mml:msub><mml:mi>S</mml:mi><mml:mo>min⁡</mml:mo></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>S</mml:mi><mml:mo>max⁡</mml:mo></mml:msub></mml:mrow></mml:munderover><mml:msup><mml:mi>q</mml:mi><mml:mo>+</mml:mo></mml:msup><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mtext>d</mml:mtext><mml:mi>S</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:munderover><mml:mo movablelimits="false">∫</mml:mo><mml:mrow><mml:msub><mml:mi>S</mml:mi><mml:mo>min⁡</mml:mo></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>S</mml:mi><mml:mo>max⁡</mml:mo></mml:msub></mml:mrow></mml:munderover><mml:msup><mml:mi>q</mml:mi><mml:mo>-</mml:mo></mml:msup><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mtext>d</mml:mtext><mml:mi>S</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:mi mathvariant="normal">s</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">in</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:munderover><mml:mo movablelimits="false">∫</mml:mo><mml:mrow><mml:msub><mml:mi>S</mml:mi><mml:mo>min⁡</mml:mo></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>S</mml:mi><mml:mo>max⁡</mml:mo></mml:msub></mml:mrow></mml:munderover><mml:msubsup><mml:mi>q</mml:mi><mml:mi mathvariant="normal">s</mml:mi><mml:mo>+</mml:mo></mml:msubsup><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mtext>d</mml:mtext><mml:mi>S</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:mi mathvariant="normal">s</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">out</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:munderover><mml:mo movablelimits="false">∫</mml:mo><mml:mrow><mml:msub><mml:mi>S</mml:mi><mml:mo>min⁡</mml:mo></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>S</mml:mi><mml:mo>max⁡</mml:mo></mml:msub></mml:mrow></mml:munderover><mml:msubsup><mml:mi>q</mml:mi><mml:mi mathvariant="normal">s</mml:mi><mml:mo>-</mml:mo></mml:msubsup><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mtext>d</mml:mtext><mml:mi>S</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>,</mml:mo><mml:mi mathvariant="normal">in</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:munderover><mml:mo movablelimits="false">∫</mml:mo><mml:mrow><mml:msub><mml:mi>S</mml:mi><mml:mo>min⁡</mml:mo></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>S</mml:mi><mml:mo>max⁡</mml:mo></mml:msub></mml:mrow></mml:munderover><mml:msubsup><mml:mi>q</mml:mi><mml:mrow><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mo>+</mml:mo></mml:msubsup><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mtext>d</mml:mtext><mml:mi>S</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>,</mml:mo><mml:mi mathvariant="normal">out</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:munderover><mml:mo movablelimits="false">∫</mml:mo><mml:mrow><mml:msub><mml:mi>S</mml:mi><mml:mo>min⁡</mml:mo></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>S</mml:mi><mml:mo>max⁡</mml:mo></mml:msub></mml:mrow></mml:munderover><mml:msubsup><mml:mi>q</mml:mi><mml:mrow><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mo>-</mml:mo></mml:msubsup><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mtext>d</mml:mtext><mml:mi>S</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:math></disp-formula>

          and by deriving transport-weighted inflow and outflow salinities and squared salinities,

            <disp-formula id="Ch1.E17" content-type="numbered"><label>17</label><mml:math id="M129" display="block"><mml:mtable class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:mi mathvariant="normal">s</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">in</mml:mi></mml:mrow></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:mi mathvariant="normal">s</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">out</mml:mi></mml:mrow></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mo>(</mml:mo><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msub><mml:mo>)</mml:mo><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>,</mml:mo><mml:mi mathvariant="normal">in</mml:mi></mml:mrow></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo><mml:mo>(</mml:mo><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msub><mml:mo>)</mml:mo><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>,</mml:mo><mml:mi mathvariant="normal">out</mml:mi></mml:mrow></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula></p>
      <p id="d2e4769">An exemplary TEF profile is found in Fig. <xref ref-type="fig" rid="F2"/>b for the Elbe River estuary. Zero values for <inline-formula><mml:math id="M130" display="inline"><mml:mrow><mml:mi>q</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> occur for extreme values of <inline-formula><mml:math id="M131" display="inline"><mml:mrow><mml:mi>Q</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, in consistency with Eq. (<xref ref-type="disp-formula" rid="Ch1.E15"/>). For the two-layer exchange flow shown here, there is one unique maximum of <inline-formula><mml:math id="M132" display="inline"><mml:mrow><mml:mi>Q</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, such that the salinity <inline-formula><mml:math id="M133" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula> at which this occurs is the dividing salinity <inline-formula><mml:math id="M134" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">div</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> between inflow and outflow <xref ref-type="bibr" rid="bib1.bibx109" id="paren.46"/>. Note that the dividing salinity <inline-formula><mml:math id="M135" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">div</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> can also be used to calculate the Knudsen parameters <inline-formula><mml:math id="M136" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M137" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M138" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M139" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, providing a numerically more robust method compared to the direct computation via Eq. (<xref ref-type="disp-formula" rid="Ch1.E16"/>) <xref ref-type="bibr" rid="bib1.bibx97" id="paren.47"/>. For multi-layer flows, multiple dividing salinities may occur <xref ref-type="bibr" rid="bib1.bibx97 bib1.bibx22" id="paren.48"/>.</p>
      <p id="d2e4904">The TEF analysis framework has been applied for a variety of estuarine studies, such as for tidal estuaries <xref ref-type="bibr" rid="bib1.bibx103 bib1.bibx26 bib1.bibx164 bib1.bibx30 bib1.bibx86 bib1.bibx135" id="paren.49"/>, tidal bays <xref ref-type="bibr" rid="bib1.bibx52 bib1.bibx134 bib1.bibx170 bib1.bibx86" id="paren.50"/>, non-tidal estuaries <xref ref-type="bibr" rid="bib1.bibx83 bib1.bibx22" id="paren.51"/>, inverse estuaries <xref ref-type="bibr" rid="bib1.bibx98" id="paren.52"/>, fjords <xref ref-type="bibr" rid="bib1.bibx154 bib1.bibx86 bib1.bibx107" id="paren.53"/>, and regional seas <xref ref-type="bibr" rid="bib1.bibx32 bib1.bibx18" id="paren.54"/>.</p>
</sec>
<sec id="Ch1.S3.SS3">
  <label>3.3</label><title>Knudsen theory</title>
      <p id="d2e4934">To assess how entire estuaries quantitively act as mixing machines, the local relations derived in Sect. <xref ref-type="sec" rid="Ch1.S2.SS2"/> are now integrated over estuarine volumes. For this, the continuity equation Eq. (<xref ref-type="disp-formula" rid="Ch1.E3"/>) and the salinity equation Eq. (<xref ref-type="disp-formula" rid="Ch1.E4"/>) are first integrated over the estuarine volume <inline-formula><mml:math id="M140" display="inline"><mml:mi>V</mml:mi></mml:math></inline-formula> which is separated from the ocean by means of a fixed vertical transect:

            <disp-formula id="Ch1.E18" content-type="numbered"><label>18</label><mml:math id="M141" display="block"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mtext>d</mml:mtext><mml:mi>V</mml:mi></mml:mrow><mml:mrow><mml:mtext>d</mml:mtext><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="1em"/><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mtext>d</mml:mtext><mml:mfenced open="(" close=")"><mml:mrow><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">¯</mml:mo></mml:mover><mml:mi>V</mml:mi></mml:mrow></mml:mfenced></mml:mrow><mml:mrow><mml:mtext>d</mml:mtext><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          (see Fig. <xref ref-type="fig" rid="F3"/>a) with the inflow transport and representative salinity <inline-formula><mml:math id="M142" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:mo>≥</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M143" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (the ocean water inflow), outflow transport and representative salinity <inline-formula><mml:math id="M144" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M145" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (the brackish water outflow), as defined in Eqs. (<xref ref-type="disp-formula" rid="Ch1.E16"/>) and (<xref ref-type="disp-formula" rid="Ch1.E17"/>). Further quantities in Eq. (<xref ref-type="disp-formula" rid="Ch1.E18"/>) are the river run-off <inline-formula><mml:math id="M146" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub><mml:mo>≥</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula> (assuming zero river salinity for simplicity), the average salinity in the estuary <inline-formula><mml:math id="M147" display="inline"><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">¯</mml:mo></mml:mover></mml:math></inline-formula>, and the volume-integrated salinity <inline-formula><mml:math id="M148" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">¯</mml:mo></mml:mover><mml:mi>V</mml:mi></mml:mrow></mml:math></inline-formula>. Details of the derivation of Eq. (<xref ref-type="disp-formula" rid="Ch1.E18"/>) are given in <xref ref-type="bibr" rid="bib1.bibx20" id="text.55"/>. The conservation laws Eq. (<xref ref-type="disp-formula" rid="Ch1.E18"/>) have already been formulated by <xref ref-type="bibr" rid="bib1.bibx80" id="text.56"/> and have become the basis for analyses of exchange flow in many estuaries <xref ref-type="bibr" rid="bib1.bibx71 bib1.bibx103 bib1.bibx154 bib1.bibx26 bib1.bibx18" id="paren.57"><named-content content-type="pre">see e.g.,</named-content></xref>. The positioning of the transect that separates the estuarine volume from the ocean is arbitrary, but often the geographical location of the river mouth is chosen. In Eq. (<xref ref-type="disp-formula" rid="Ch1.E18"/>) freshwater transports across the surface (evaporation or precipitation), the bottom (submarine groundwater discharge) as well as horizontal diffusive salt transports across the transect are neglected. Relations including freshwater transport through the sea surface can be found in <xref ref-type="bibr" rid="bib1.bibx99" id="text.58"/>. Under long-term averaged conditions, the volume and salt storage terms on the right-hand side of Eq. (<xref ref-type="disp-formula" rid="Ch1.E18"/>) would vanish. Under such circumstances, <inline-formula><mml:math id="M149" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:mo>≤</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M150" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:mo>≤</mml:mo><mml:mo>-</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> must hold, as illustrated for the Elbe estuary in Fig. <xref ref-type="fig" rid="F4"/>a, b, where balanced conditions with a nearly vanishing volume storage <inline-formula><mml:math id="M151" display="inline"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mtext>d</mml:mtext><mml:mi>V</mml:mi></mml:mrow><mml:mrow><mml:mtext>d</mml:mtext><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:math></inline-formula> are given. Under such circumstances, inflow from the ocean occurs at higher salinities than outflow towards the ocean due to mixing with riverine water.</p>

      <fig id="F3" specific-use="star"><label>Figure 3</label><caption><p id="d2e5221">Sketch showing the principles of volume and salt conservation as well as mixing in estuaries: <bold>(a)</bold> Estuarine volume (light blue shading) bounded by a fixed transect (bold red line), showing the classical <xref ref-type="bibr" rid="bib1.bibx80" id="text.59"/> transports and salinities as well as the Knudsen mixing law Eq. (<xref ref-type="disp-formula" rid="Ch1.E21"/>) as derived by <xref ref-type="bibr" rid="bib1.bibx109" id="text.60"/>. <bold>(b)</bold> Estuarine volume (light blue shading) bounded by an isohaline of salinity <inline-formula><mml:math id="M152" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula> (bold blue line), showing the diahaline advective (<inline-formula><mml:math id="M153" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">dia</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and diffusive transports (<inline-formula><mml:math id="M154" display="inline"><mml:mrow><mml:msub><mml:mi>J</mml:mi><mml:mi>S</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) as well as the mixing law Eq. (<xref ref-type="disp-formula" rid="Ch1.E32"/>) as derived by <xref ref-type="bibr" rid="bib1.bibx9" id="text.61"/>. <bold>(c)</bold> Envelope of a discrete estuarine sub-volume (light blue shading) around the isohaline of salinity <inline-formula><mml:math id="M155" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula> (dashed blue line), bounded by the isohalines of salinities <inline-formula><mml:math id="M156" display="inline"><mml:mrow><mml:mi>S</mml:mi><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>S</mml:mi></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M157" display="inline"><mml:mrow><mml:mi>S</mml:mi><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>S</mml:mi></mml:mrow></mml:math></inline-formula> (bold blue lines). The mixing per discrete salinity class is shown as well as the limit for <inline-formula><mml:math id="M158" display="inline"><mml:mrow><mml:mi>S</mml:mi><mml:mo>→</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula> which results in the universal law of estuarine mixing Eq. (<xref ref-type="disp-formula" rid="Ch1.E33"/>) for an infinitesimally thin salinity class. The bottom is marked by an orange line, the surface by a grey line and the fixed river transect by a red line. Advective volume transports are marked by blue arrows and the diffusive salt transport is marked by a yellow arrow. </p></caption>
          <graphic xlink:href="https://os.copernicus.org/articles/22/1875/2026/os-22-1875-2026-f03.png"/>

        </fig>

      <p id="d2e5346">The bulk mixing of an estuary is then obtained by averaging the integrated salinity variance budget Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S2.E48"/>) in time:

            <disp-formula id="Ch1.E19" content-type="numbered"><label>19</label><mml:math id="M159" display="block"><mml:mtable class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mtext>d</mml:mtext><mml:mrow><mml:mtext>d</mml:mtext><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:munder><mml:mo movablelimits="false">∫</mml:mo><mml:mi>V</mml:mi></mml:munder><mml:msubsup><mml:msup><mml:mi>s</mml:mi><mml:mo>′</mml:mo></mml:msup><mml:mi mathvariant="normal">tot</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mtext>d</mml:mtext><mml:mi>V</mml:mi></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mo>≈</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub><mml:msubsup><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">¯</mml:mo></mml:mover><mml:mi mathvariant="normal">tot</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>+</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">¯</mml:mo></mml:mover><mml:mi mathvariant="normal">tot</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>+</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">¯</mml:mo></mml:mover><mml:mi mathvariant="normal">tot</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:mi mathvariant="double-struck">M</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

          with the estuarine bulk mixing

            <disp-formula id="Ch1.E20" content-type="numbered"><label>20</label><mml:math id="M160" display="block"><mml:mrow><mml:mi mathvariant="double-struck">M</mml:mi><mml:mo>=</mml:mo><mml:mfenced close="〉" open="〈"><mml:mrow><mml:munder><mml:mo movablelimits="false">∫</mml:mo><mml:mi>V</mml:mi></mml:munder><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mtext>d</mml:mtext><mml:mi>V</mml:mi></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          see the derivations by <xref ref-type="bibr" rid="bib1.bibx109" id="text.62"/> and <xref ref-type="bibr" rid="bib1.bibx20" id="text.63"/>. In Eq. (<xref ref-type="disp-formula" rid="Ch1.E19"/>), the approximations <inline-formula><mml:math id="M161" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msub><mml:mo>)</mml:mo><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:mo>≈</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M162" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msub><mml:mo>)</mml:mo><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:mo>≈</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> have been made for simplicity, where <inline-formula><mml:math id="M163" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msub><mml:mo>)</mml:mo><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M164" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msub><mml:mo>)</mml:mo><mml:mi mathvariant="normal">out</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are inflowing and outflowing salinity squares, respectively, as defined in Eq. (<xref ref-type="disp-formula" rid="Ch1.E17"/>). Assuming long-term averaging such that the temporal derivatives vanish and using Eq. (<xref ref-type="disp-formula" rid="Ch1.E18"/>), we finally obtain

            <disp-formula id="Ch1.E21" content-type="numbered"><label>21</label><mml:math id="M165" display="block"><mml:mrow><mml:mi mathvariant="double-struck">M</mml:mi><mml:mo>≈</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>+</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>=</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:mo>)</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          <xref ref-type="bibr" rid="bib1.bibx109" id="paren.64"/>, relating the Knudsen parameters directly to estuarine mixing. While <xref ref-type="bibr" rid="bib1.bibx80" id="text.65"/> had mentioned the role of mixing for the estuarine exchange flow qualitatively, Eq. (<xref ref-type="disp-formula" rid="Ch1.E21"/>) gave the first quantitative estimate of estuarine mixing as a function of the Knudsen parameters. An accurate bulk mixing estimate allowing <inline-formula><mml:math id="M166" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msub><mml:mo>)</mml:mo><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:menclose notation="updiagonalstrike"><mml:mo>=</mml:mo></mml:menclose><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M167" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msub><mml:mo>)</mml:mo><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:menclose notation="updiagonalstrike"><mml:mo>=</mml:mo></mml:menclose><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> has been derived by <xref ref-type="bibr" rid="bib1.bibx20" id="text.66"/>:

            <disp-formula id="Ch1.E22" content-type="numbered"><label>22</label><mml:math id="M168" display="block"><mml:mrow><mml:mi mathvariant="double-struck">M</mml:mi><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msub><mml:mo>)</mml:mo><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msub><mml:mo>)</mml:mo><mml:mi mathvariant="normal">out</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>

          For the special case of <inline-formula><mml:math id="M169" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msub><mml:mo>)</mml:mo><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M170" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msub><mml:mo>)</mml:mo><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>, Eq. (<xref ref-type="disp-formula" rid="Ch1.E21"/>) is identical to Eq. (<xref ref-type="disp-formula" rid="Ch1.E22"/>). These equalities are only exact when the inflowing and outflowing salinities are constant in time and space during the averaging interval <xref ref-type="bibr" rid="bib1.bibx20" id="paren.67"/>. For estuaries with strongly fluctuating salinities at the mouth <xref ref-type="bibr" rid="bib1.bibx26" id="paren.68"><named-content content-type="pre">such as for the short Merrimack estuary, see</named-content></xref> relation Eq. (<xref ref-type="disp-formula" rid="Ch1.E22"/>) has to be used instead of Eq. (<xref ref-type="disp-formula" rid="Ch1.E21"/>) to obtain an accurate estimate for the mixing.</p>
      <p id="d2e5919">Relation Eq. (<xref ref-type="disp-formula" rid="Ch1.E21"/>) is demonstrated in Fig. <xref ref-type="fig" rid="F4"/>c for a numerical simulation of the Elbe estuary. It can be seen that the estimate is near-exact for almost the entire length of the estuary, proving its value for the study of bulk mixing in realistic estuaries, as also tested in studies by <xref ref-type="bibr" rid="bib1.bibx8" id="text.69"/> and <xref ref-type="bibr" rid="bib1.bibx135" id="text.70"/>.</p>

      <fig id="F4"><label>Figure 4</label><caption><p id="d2e5934">Bulk parameters of the exchange flow through cross-channel transects at each along-channel position <inline-formula><mml:math id="M171" display="inline"><mml:mi>x</mml:mi></mml:math></inline-formula> from a numerical simulation of the Elbe River estuary, averaged for the month of April 2024. <bold>(a)</bold> Volume inflow and outflow <inline-formula><mml:math id="M172" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M173" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, respectively, compared to the freshwater discharge <inline-formula><mml:math id="M174" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. <bold>(b)</bold> Inflow and outflow salinities <inline-formula><mml:math id="M175" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M176" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, respectively, as well as their difference <inline-formula><mml:math id="M177" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>s</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. <bold>(c)</bold> Integrated mixing <inline-formula><mml:math id="M178" display="inline"><mml:mrow><mml:mi mathvariant="double-struck">M</mml:mi><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> within the estuarine volume bounded by a cross-channel transect at along-channel position <inline-formula><mml:math id="M179" display="inline"><mml:mi>x</mml:mi></mml:math></inline-formula>, split into the contributions of the physical mixing <inline-formula><mml:math id="M180" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="double-struck">M</mml:mi><mml:mi mathvariant="normal">phy</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> due to the mixing parameterisation as well as the numerical mixing <inline-formula><mml:math id="M181" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="double-struck">M</mml:mi><mml:mi mathvariant="normal">num</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> due to discretization errors. The directly computed mixing (solid lines) is compared to the mixing estimate Eq. (<xref ref-type="disp-formula" rid="Ch1.E21"/>).</p></caption>
          <graphic xlink:href="https://os.copernicus.org/articles/22/1875/2026/os-22-1875-2026-f04.png"/>

        </fig>

      <p id="d2e6085">The principle of salt mixing inside an estuary bounded by a fixed transect is sketched in Fig. <xref ref-type="fig" rid="F3"/>a. The first relation of Eq. (<xref ref-type="disp-formula" rid="Ch1.E21"/>) shows that the mixing does also balance the exchange of squared salinity with the ocean, such that mixing can also be defined as the reduction of squared salinity integrated over the estuary <xref ref-type="bibr" rid="bib1.bibx20" id="paren.71"><named-content content-type="pre">which often simplifies the calculations, see</named-content></xref>, as it is expressed locally in Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S2.E49"/>). The second relation of Eq. (<xref ref-type="disp-formula" rid="Ch1.E21"/>) shows that estuarine mixing can be estimated simply by knowing inflowing and outflowing salinities and the river run-off <xref ref-type="bibr" rid="bib1.bibx109" id="paren.72"/>. The third relation of Eq. (<xref ref-type="disp-formula" rid="Ch1.E21"/>) demonstrates the relation between estuarine circulation <xref ref-type="bibr" rid="bib1.bibx8 bib1.bibx107" id="paren.73"><named-content content-type="pre">quantified as strength of <inline-formula><mml:math id="M182" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, see</named-content></xref> and mixing, a topic that is expanded on in Sect. <xref ref-type="sec" rid="Ch1.S3.SS6"/>.</p>
      <p id="d2e6125">Using the Knudsen relations Eq. (<xref ref-type="disp-formula" rid="Ch1.E18"/>), yet another useful reformulation of Eq. (<xref ref-type="disp-formula" rid="Ch1.E21"/>) has been derived by <xref ref-type="bibr" rid="bib1.bibx131" id="text.74"/> for estuaries in which the riverine inflow has non-zero salinity:

            <disp-formula id="Ch1.E23" content-type="numbered"><label>23</label><mml:math id="M183" display="block"><mml:mrow><mml:mi mathvariant="double-struck">M</mml:mi><mml:mo>≈</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          which is identical to Eq. (<xref ref-type="disp-formula" rid="Ch1.E21"/>) for a river salinity of <inline-formula><mml:math id="M184" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>. In Eq. (<xref ref-type="disp-formula" rid="Ch1.E23"/>), the right-hand side is split into two terms representing the <italic>mixing pathways</italic> from the inflows to the outflows, with the first one leading from the river inflow to the brackish water outflow and the second one leading from the seawater inflow to the brackish water outflow (with source-water salinities put first in the brackets).</p>
      <p id="d2e6221">The Knudsen mixing relation Eq. (<xref ref-type="disp-formula" rid="Ch1.E21"/>) has been extended by <xref ref-type="bibr" rid="bib1.bibx99" id="text.75"/> for the case of non-zero freshwater fluxes through the surface, i.e., precipitation and evaporation:

            <disp-formula id="Ch1.E24" content-type="numbered"><label>24</label><mml:math id="M185" display="block"><mml:mrow><mml:mi mathvariant="double-struck">M</mml:mi><mml:mo>≈</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">surf</mml:mi></mml:msub><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">surf</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">surf</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          with the surface freshwater transport <inline-formula><mml:math id="M186" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">surf</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (positive for net precipitation) and the representative surface salinity <inline-formula><mml:math id="M187" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">surf</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (square root of surface salinity variance transport divided by <inline-formula><mml:math id="M188" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">surf</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>). Since <inline-formula><mml:math id="M189" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">surf</mml:mi></mml:msub><mml:mo>&gt;</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:msup><mml:mo>)</mml:mo><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> for evaporation and <inline-formula><mml:math id="M190" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">surf</mml:mi></mml:msub><mml:mo>&lt;</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:msup><mml:mo>)</mml:mo><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> for precipitation, both evaporation and precipitation are sources of mixing, in addition to the exchange flow. The example of the Persian Gulf as an inverse estuary with strong evaporation is briefly discussed in Sect. <xref ref-type="sec" rid="Ch1.S4.SS1.SSS3"/>.</p>
      <p id="d2e6391">For the interpretation of the mixing relations it is instructive to consider the mixing completeness Mc <xref ref-type="bibr" rid="bib1.bibx109 bib1.bibx20" id="paren.76"/> by non-dimensionalising Eq. (<xref ref-type="disp-formula" rid="Ch1.E21"/>) using <inline-formula><mml:math id="M191" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M192" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>:

            <disp-formula id="Ch1.E25" content-type="numbered"><label>25</label><mml:math id="M193" display="block"><mml:mrow><mml:mi mathvariant="normal">Mc</mml:mi><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi mathvariant="double-struck">M</mml:mi><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>≈</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          where the river run-off <inline-formula><mml:math id="M194" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and inflowing salinity <inline-formula><mml:math id="M195" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (sometimes equated to the ocean salinity) can be considered as the external forcing of the estuary. Mixing completeness in estuaries can cover the full range of theoretically possible values of <inline-formula><mml:math id="M196" display="inline"><mml:mrow><mml:mn mathvariant="normal">0</mml:mn><mml:mo>≤</mml:mo><mml:mi mathvariant="normal">Mc</mml:mi><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>. Table <xref ref-type="table" rid="T1"/> gives a number of examples for estuarine systems with low, medium and high mixing completeness. It should be noted that the mixing completeness is always calculated with respect to a fixed transect and that for each estuarine system the mixing completeness varies strongly with discharge and tidal intensity (e.g., during the spring-neap cycle).</p>

      <fig id="F5" specific-use="star"><label>Figure 5</label><caption><p id="d2e6509">Sketch showing estuarine conditions for low mixing causing weak estuarine circulation <bold>(a)</bold> and high mixing causing strong estuarine circulation <bold>(b)</bold>. In both panels, <inline-formula><mml:math id="M197" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M198" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are supposed to be identical. With prescribed low mixing <inline-formula><mml:math id="M199" display="inline"><mml:mi mathvariant="double-struck">M</mml:mi></mml:math></inline-formula> in panel <bold>(a)</bold> and a high mixing <inline-formula><mml:math id="M200" display="inline"><mml:mi mathvariant="double-struck">M</mml:mi></mml:math></inline-formula> in panel <bold>(b)</bold>, the Knudsen relations Eqs. (<xref ref-type="disp-formula" rid="Ch1.E18"/>) and (<xref ref-type="disp-formula" rid="Ch1.E21"/>) quantify <inline-formula><mml:math id="M201" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M202" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M203" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>.</p></caption>
          <graphic xlink:href="https://os.copernicus.org/articles/22/1875/2026/os-22-1875-2026-f05.png"/>

        </fig>

      <p id="d2e6605">In the extreme case of no mixing, the riverine freshwater would flow out at the surface with no modification and no ocean water entering the system (<inline-formula><mml:math id="M204" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M205" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>), such that the mixing completeness would be zero. In estuaries with low mixing, brackish water of only low salinity is produced, with <inline-formula><mml:math id="M206" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:mo>≪</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M207" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:mo>≪</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, such that the mixing completeness is <inline-formula><mml:math id="M208" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:mo>/</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:mo>≪</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>, see sketch in Fig. <xref ref-type="fig" rid="F5"/>a. This would theoretically be the case for deep fjords with low tidal energy <xref ref-type="bibr" rid="bib1.bibx69" id="paren.77"/>. Mostly, fjords do however have large water bodies and low discharge such that the freshwater is strongly diluted by tidal mixing as, for example, for the Puget Sound where the mixing completeness is as large as about 0.97 <xref ref-type="bibr" rid="bib1.bibx154" id="paren.78"><named-content content-type="pre">see</named-content><named-content content-type="post">and Table <xref ref-type="table" rid="T1"/></named-content></xref>. Low mixing values of about <inline-formula><mml:math id="M209" display="inline"><mml:mrow><mml:mi mathvariant="normal">Mc</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.18</mml:mn></mml:mrow></mml:math></inline-formula> have been observed for the tidally intense Merrimack estuary during high discharge <xref ref-type="bibr" rid="bib1.bibx26" id="paren.79"><named-content content-type="pre">see</named-content></xref>. Under these conditions, the salt intrusion length shortens considerably such that high-salinity ocean water and low-salinity river water are in close contact at the mouth of this estuary discharging directly into the coastal ocean, leading to low mixing. Other low values of mixing completeness are also observed for the Hudson river estuary during neap tide <xref ref-type="bibr" rid="bib1.bibx164" id="paren.80"><named-content content-type="pre"><inline-formula><mml:math id="M210" display="inline"><mml:mrow><mml:mi mathvariant="normal">Mc</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.36</mml:mn></mml:mrow></mml:math></inline-formula>, see</named-content></xref> and the Elbe River estuary at high discharge <xref ref-type="bibr" rid="bib1.bibx135" id="paren.81"><named-content content-type="pre"><inline-formula><mml:math id="M211" display="inline"><mml:mrow><mml:mi mathvariant="normal">Mc</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.37</mml:mn></mml:mrow></mml:math></inline-formula>, see</named-content></xref>. In both cases, the water is relatively strongly stratified in the region of the transect such that <inline-formula><mml:math id="M212" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:mo>≪</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. The large variability that estuaries have due to changes in discharge and tidal intensity is demonstrated by the fact that the Elbe for low discharge, the Merrimack for low discharge, and the Hudson for spring show values of mixing completeness as high as <inline-formula><mml:math id="M213" display="inline"><mml:mrow><mml:mi mathvariant="normal">Mc</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.75</mml:mn></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M214" display="inline"><mml:mrow><mml:mi mathvariant="normal">Mc</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.86</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M215" display="inline"><mml:mrow><mml:mi mathvariant="normal">Mc</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.87</mml:mn></mml:mrow></mml:math></inline-formula>, respectively. Almost complete mixing is obtained for the shallow Wadden Sea of the German Bight, as sketched in Fig. <xref ref-type="fig" rid="F5"/>b. In the Sylt-Rømø-Bight, where the freshwater run-off is low and tidal mixing is high, <xref ref-type="bibr" rid="bib1.bibx52" id="text.82"/> calculated values of inflowing and outflowing salinity both <inline-formula><mml:math id="M216" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">30</mml:mn></mml:mrow></mml:math></inline-formula> g kg<sup>−1</sup> with only about 1 g kg<sup>−1</sup> difference, such that the mixing compleness is about <inline-formula><mml:math id="M219" display="inline"><mml:mrow><mml:mi mathvariant="normal">Mc</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:mo>/</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:mo>≈</mml:mo><mml:mn mathvariant="normal">30</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">31</mml:mn><mml:mo>≈</mml:mo><mml:mn mathvariant="normal">0.97</mml:mn></mml:mrow></mml:math></inline-formula>. These are values comparable to Puget Sound, see above. For the Baltic Sea, a non-tidal semi-enclosed sea in northern Europe, <xref ref-type="bibr" rid="bib1.bibx80" id="text.83"/> estimated <inline-formula><mml:math id="M220" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">17.4</mml:mn></mml:mrow></mml:math></inline-formula> g kg<sup>−1</sup> and <inline-formula><mml:math id="M222" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">8.7</mml:mn></mml:mrow></mml:math></inline-formula> g kg<sup>−1</sup>, such that the mixing completeness is <inline-formula><mml:math id="M224" display="inline"><mml:mrow><mml:mi mathvariant="normal">Mc</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula>, a value that could be confirmed by a multi-decadal model simulation <xref ref-type="bibr" rid="bib1.bibx18 bib1.bibx20" id="paren.84"/>.</p>

<table-wrap id="T1" specific-use="star"><label>Table 1</label><caption><p id="d2e6964">List of estuarine systems with typical values of mixing completeness <inline-formula><mml:math id="M225" display="inline"><mml:mi mathvariant="normal">Mc</mml:mi></mml:math></inline-formula> for different tidal and runoff conditions. Note that estuaries with strong temporal variation (e.g., the Hudson River estuary during the spring-neap cycle) are not in balance, such that Eq. (<xref ref-type="disp-formula" rid="Ch1.E25"/>) is only a rough approximation.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Name of estuary</oasis:entry>
         <oasis:entry colname="col2">position of transect</oasis:entry>
         <oasis:entry colname="col3">mixing completeness <inline-formula><mml:math id="M226" display="inline"><mml:mi mathvariant="normal">Mc</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">Reference</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Merrimack (high discharge)</oasis:entry>
         <oasis:entry colname="col2">jetties</oasis:entry>
         <oasis:entry colname="col3">0.18</oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx26" id="text.85"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Hudson (neap tide)</oasis:entry>
         <oasis:entry colname="col2">Battery</oasis:entry>
         <oasis:entry colname="col3">0.36</oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx164" id="text.86"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Elbe (high discharge)</oasis:entry>
         <oasis:entry colname="col2">Cuxhaven</oasis:entry>
         <oasis:entry colname="col3">0.37</oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx135" id="text.87"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Columbia (spring-neap cycle)</oasis:entry>
         <oasis:entry colname="col2">Cape Disappointment</oasis:entry>
         <oasis:entry colname="col3">0.45</oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx103" id="text.88"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Baltic Sea (observed)</oasis:entry>
         <oasis:entry colname="col2">Darss Sill</oasis:entry>
         <oasis:entry colname="col3">0.50</oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx80" id="text.89"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Baltic Sea (simulated)</oasis:entry>
         <oasis:entry colname="col2">Darss &amp; Drogden Sill combined</oasis:entry>
         <oasis:entry colname="col3">0.54</oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx18 bib1.bibx20" id="text.90"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Elbe (low discharge)</oasis:entry>
         <oasis:entry colname="col2">Cuxhaven</oasis:entry>
         <oasis:entry colname="col3">0.75</oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx135" id="text.91"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Merrimack (low discharge)</oasis:entry>
         <oasis:entry colname="col2">jetties</oasis:entry>
         <oasis:entry colname="col3">0.86</oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx26" id="text.92"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Hudson (spring tide)</oasis:entry>
         <oasis:entry colname="col2">Battery</oasis:entry>
         <oasis:entry colname="col3">0.87</oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx164" id="text.93"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Puget Sound (spring-neap average)</oasis:entry>
         <oasis:entry colname="col2">Admiralty Inlet North</oasis:entry>
         <oasis:entry colname="col3">0.97</oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx154" id="text.94"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Wadden Sea (Sylt-Rømø Bight)</oasis:entry>
         <oasis:entry colname="col2">tidal gulley</oasis:entry>
         <oasis:entry colname="col3">0.97</oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx52" id="text.95"/>
                  </oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</sec>
<sec id="Ch1.S3.SS4">
  <label>3.4</label><title>Water Mass Transformation and diahaline mixing</title>
      <p id="d2e7225">Often, it is instructive to consider dynamics of estuaries in an isohaline framework, i.e., to evaluate transports, mixing and other properties relative to moving surfaces of constant salinity (isohalines) instead of the Eulerian framework with fixed spatial coordinates. With this, a quasi-Lagrangean perspective is added to the analysis with reference to the moving flow. In the isohaline analysis, geographical features such as a fixed transect at the mouth of the estuary do not play a central role. Since isohalines can move inside and outside the estuarine water body and extend over large areas covering parts of the estuary and the river plume, the isohaline analysis treats estuary and river plume as a dynamic continuum. This isohaline view of estuarine dynamics was first proposed by <xref ref-type="bibr" rid="bib1.bibx161" id="text.96"/>, with specific reference to the Baltic Sea with its isohalines extending over up to 1000 km from the Central Baltic Sea to its Western reaches <xref ref-type="bibr" rid="bib1.bibx57" id="paren.97"/>. Later, the isohaline concept was applied to tidal estuaries <xref ref-type="bibr" rid="bib1.bibx105 bib1.bibx108 bib1.bibx164" id="paren.98"/> and river plumes <xref ref-type="bibr" rid="bib1.bibx58 bib1.bibx114" id="paren.99"/>. Here, we first introduce a local diahaline analysis, before we discuss the bulk analysis of estuarine dynamics across isohaline surfaces in Sect. <xref ref-type="sec" rid="Ch1.S3.SS5"/>.</p>
      <p id="d2e7242">Local mixing can move isohaline surfaces vertically such that a diahaline mass transport occurs relative to the moving isohaline surface. When normalised to isohaline unit surface and unit mass, this results in a so-called entrainment velocity. Starting for explanation with the one-dimensional salinity budget equation Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S4.E52"/>), a coordinate transformation from geopotential <inline-formula><mml:math id="M227" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> to salinity coordinates <inline-formula><mml:math id="M228" display="inline"><mml:mi>s</mml:mi></mml:math></inline-formula> (assuming a stable salinity stratification with <inline-formula><mml:math id="M229" display="inline"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mi>z</mml:mi><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>), after time averaging in salinity coordinates, <inline-formula><mml:math id="M230" display="inline"><mml:mrow><mml:mo>〈</mml:mo><mml:mo>⋅</mml:mo><mml:msub><mml:mo>〉</mml:mo><mml:mi>S</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, a formulation for the vertical entrainment velocity <inline-formula><mml:math id="M231" display="inline"><mml:mrow><mml:msub><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> (vertical velocity relative to the vertically moving isohaline) is obtained:

            <disp-formula id="Ch1.E26" content-type="numbered"><label>26</label><mml:math id="M232" display="block"><mml:mrow><mml:msub><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:msub><mml:mfenced close="〉" open="〈"><mml:mrow><mml:mi>w</mml:mi><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced><mml:mi>S</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mo>∂</mml:mo><mml:mrow><mml:mo>∂</mml:mo><mml:mi>S</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:msub><mml:mfenced close="〉" open="〈"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>S</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced><mml:mi>S</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>j</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>S</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></disp-formula>

          <xref ref-type="bibr" rid="bib1.bibx164 bib1.bibx75" id="paren.100"/>, where <inline-formula><mml:math id="M233" display="inline"><mml:mrow><mml:msub><mml:mi>j</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is the time-averaged upward salinity flux through the moving isohaline. The vertical velocity of the isohaline <inline-formula><mml:math id="M234" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula> due to both advection and turbulent diffusion is given by <inline-formula><mml:math id="M235" display="inline"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:math></inline-formula> (with <inline-formula><mml:math id="M236" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> being the vertical position of the isohaline). Details of the derivation of Eq. (<xref ref-type="disp-formula" rid="Ch1.E26"/>) are given in Eqs. (<xref ref-type="disp-formula" rid="App1.Ch1.S4.E50"/>)–(<xref ref-type="disp-formula" rid="App1.Ch1.S4.E52"/>). The meaning of Eq. (<xref ref-type="disp-formula" rid="Ch1.E26"/>) is sketched in Fig.  <xref ref-type="fig" rid="F6"/>a: there is a maximum of vertical turbulent salinity flux <inline-formula><mml:math id="M237" display="inline"><mml:mrow><mml:msub><mml:mi>j</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> in the entrainment layer that caps the turbulent bottom boundary layer. This maximum results from a large vertical salinity gradient <inline-formula><mml:math id="M238" display="inline"><mml:mrow><mml:mo>|</mml:mo><mml:mo>∂</mml:mo><mml:mi>s</mml:mi><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mi>z</mml:mi><mml:mo>|</mml:mo></mml:mrow></mml:math></inline-formula> at a still high level of turbulence originating from the boundary layer, expressed as eddy diffusivity <inline-formula><mml:math id="M239" display="inline"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>.  Below this maximum, vertical salinity flux is divergent, thus lowering the local salinity which in time-average leads to an upward entrainment velocity <inline-formula><mml:math id="M240" display="inline"><mml:mrow><mml:msub><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>. Above the entrainment layer, the opposite happens, resulting in a downward salinity flux. A similar process has been described and sketched by <xref ref-type="bibr" rid="bib1.bibx36" id="text.101"/>, using density fluxes near the bottom of the ocean. The exchange flow in the bottom boundary layer itself with upwelling near the bottom and downwelling above has already been described by <xref ref-type="bibr" rid="bib1.bibx40" id="text.102"/>. It should be noted that the total diahaline salt flux consists of two contributions, with one advective contribution and one diffusive contribution:

            <disp-formula id="Ch1.E27" content-type="numbered"><label>27</label><mml:math id="M241" display="block"><mml:mtable rowspacing="0.2ex" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mi>f</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:msub><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mi>S</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi>j</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>j</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>S</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mi>S</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi>j</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

          with the consequence that volume flux and salt flux are not proportional to each other and that the distribution of the diffusive salt flux in salinity coordinates entirely determines the total diahaline salt flux.</p>
      <p id="d2e7686">To relate <inline-formula><mml:math id="M242" display="inline"><mml:mrow><mml:msub><mml:mi>j</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> to mixing <inline-formula><mml:math id="M243" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, <xref ref-type="bibr" rid="bib1.bibx94" id="text.103"/> defined the local mixing per salinity class which for a vertical water column with a monotone salinity profile reads as

            <disp-formula id="Ch1.E28" content-type="numbered"><label>28</label><mml:math id="M244" display="block"><mml:mtable class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:mi>m</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:msub><mml:mfenced open="〈" close="〉"><mml:mrow><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>S</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mi>S</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mfenced close="〉" open="〈"><mml:mrow><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>S</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mn mathvariant="normal">2</mml:mn><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:msup><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>S</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfenced><mml:mi>S</mml:mi></mml:msub></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msub><mml:mfenced close="〉" open="〈"><mml:mrow><mml:mo>-</mml:mo><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>S</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced><mml:mi>S</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msub><mml:mi>j</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

          which can be seen as a thickness-weighted time-average of the local mixing <inline-formula><mml:math id="M245" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, see also <xref ref-type="bibr" rid="bib1.bibx79" id="text.104"/>, <xref ref-type="bibr" rid="bib1.bibx21" id="text.105"/> and <xref ref-type="bibr" rid="bib1.bibx94" id="text.106"/>. Combining Eqs. (<xref ref-type="disp-formula" rid="Ch1.E26"/>) and (<xref ref-type="disp-formula" rid="Ch1.E28"/>) results in a key relation between entrainment velocity and mixing,

            <disp-formula id="Ch1.E29" content-type="numbered"><label>29</label><mml:math id="M246" display="block"><mml:mrow><mml:msub><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>m</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>S</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          which could be called the diahaline mixing-entrainment relation. Note that here upward velocities <inline-formula><mml:math id="M247" display="inline"><mml:mrow><mml:msub><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> and fluxes <inline-formula><mml:math id="M248" display="inline"><mml:mrow><mml:msub><mml:mi>j</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> are denoted as positive quantities. Details of the derivation of Eq. (<xref ref-type="disp-formula" rid="Ch1.E29"/>) for non-monotone salinity distributions in three dimensions can be found in <xref ref-type="bibr" rid="bib1.bibx75" id="text.107"/>. The principle of Eq. (<xref ref-type="disp-formula" rid="Ch1.E29"/>) is sketched in Fig. <xref ref-type="fig" rid="F6"/>b: as given by Eq. (<xref ref-type="disp-formula" rid="Ch1.E28"/>), <inline-formula><mml:math id="M249" display="inline"><mml:mi>m</mml:mi></mml:math></inline-formula> has local maxima in the same locations as <inline-formula><mml:math id="M250" display="inline"><mml:mrow><mml:msub><mml:mi>j</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>, i.e., in the entrainment layers. For mixing per salinity class increasing with height, <inline-formula><mml:math id="M251" display="inline"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mi>z</mml:mi><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>⇔</mml:mo><mml:mo>∂</mml:mo><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mi>S</mml:mi><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula> (for stable salinity stratification), a positive entrainment velocity <inline-formula><mml:math id="M252" display="inline"><mml:mrow><mml:msub><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula> is expected. For mixing decreasing with height, the opposite occurs. This leads to a typical pattern of diahaline exchange flow in estuaries with positive (upward, towards lower salinities into the estuary) entrainment through an isohaline near the bottom, and a negative (downward, towards higher salinities out of the estuary) entrainment through the same isohaline near the surface further seawards. For realistic estuaries this has been shown for the Hudson River estuary <xref ref-type="bibr" rid="bib1.bibx164" id="paren.108"/>, the Pearl River estuary <xref ref-type="bibr" rid="bib1.bibx94 bib1.bibx95" id="paren.109"/>, the Elbe River estuary <xref ref-type="bibr" rid="bib1.bibx135" id="paren.110"/>, the Changjiang River estuary <xref ref-type="bibr" rid="bib1.bibx24" id="paren.111"/> and the Baltic Sea <xref ref-type="bibr" rid="bib1.bibx57" id="paren.112"/>. In particular, <xref ref-type="bibr" rid="bib1.bibx57" id="text.113"/> and <xref ref-type="bibr" rid="bib1.bibx135" id="text.114"/> calculated both sides of Eq. (<xref ref-type="disp-formula" rid="Ch1.E29"/>) independently to demonstrate their equality (aside from small numerical differences) in real-world estuarine systems. The advantage of Eq. (<xref ref-type="disp-formula" rid="Ch1.E29"/>) over Eq. (<xref ref-type="disp-formula" rid="Ch1.E26"/>) is given by the fact that <inline-formula><mml:math id="M253" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and thus <inline-formula><mml:math id="M254" display="inline"><mml:mi>m</mml:mi></mml:math></inline-formula> can be split into physical and numerical contributions (see Sect. <xref ref-type="sec" rid="Ch1.S5.SS2.SSS2"/>), such that numerically generated spurious entrainment can be calculated, as shown by <xref ref-type="bibr" rid="bib1.bibx57" id="text.115"/> for the Baltic Sea.</p>
      <p id="d2e8119">The relationship between diahaline mixing <inline-formula><mml:math id="M255" display="inline"><mml:mi>m</mml:mi></mml:math></inline-formula> and entrainment velocity <inline-formula><mml:math id="M256" display="inline"><mml:mrow><mml:msub><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> across the isohaline of 11 g kg<sup>−1</sup> is shown in Fig. <xref ref-type="fig" rid="F7"/> for the Elbe River estuary in northern Germany. It is clearly visible that as stated in Eq. (<xref ref-type="disp-formula" rid="Ch1.E29"/>), entrainment requires mixing since hotspots of the two quantities align well. In the up-estuary reach of the isohaline surface, where it is close to the bottom, upwelling (red) dominates, whereas at the down-estuary near-surface reaches of the isohaline downwelling (blue) dominates.</p>

      <fig id="F6" specific-use="star"><label>Figure 6</label><caption><p id="d2e8164">Sketch demonstrating the mechanism and distribution of diahaline exchange flow in estuaries. <bold>(a)</bold> Generation of diahaline exchange flow by means of a divergent vertical turbulent salinity flux <inline-formula><mml:math id="M258" display="inline"><mml:mrow><mml:msub><mml:mi>j</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>, according to Eq. (<xref ref-type="disp-formula" rid="Ch1.E26"/>), shown for the bottom boundary layer of an estuary. High values of <inline-formula><mml:math id="M259" display="inline"><mml:mrow><mml:msub><mml:mi>j</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> are marked by a black whirl, and low values are marked by grey whirls. The entrainment velocity is marked as red (upwards, <inline-formula><mml:math id="M260" display="inline"><mml:mrow><mml:msub><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>) and blue (downwards, <inline-formula><mml:math id="M261" display="inline"><mml:mrow><mml:msub><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>) arrows.  <bold>(b)</bold> Situation of time-averaged diahaline exchange in an estuary. The bottom boundary layer and the surface boundary layer are marked by colour, both being separated from a more stratified interior via entrainment layers. Three exemplary isohalines are drawn. The entrainment velocity is again marked as red and blue arrows, where the size of the arrows corresponds to its relative magnitude. On the right side of the sketch a typical profile of the local mixing per salinity class <inline-formula><mml:math id="M262" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is shown, along with consistent signs of the entrainment velocity <inline-formula><mml:math id="M263" display="inline"><mml:mrow><mml:msub><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>, according to Eq. (<xref ref-type="disp-formula" rid="Ch1.E29"/>). </p></caption>
          <graphic xlink:href="https://os.copernicus.org/articles/22/1875/2026/os-22-1875-2026-f06.png"/>

        </fig>

      <fig id="F7" specific-use="star"><label>Figure 7</label><caption><p id="d2e8288">Diahaline mixing <inline-formula><mml:math id="M264" display="inline"><mml:mi>m</mml:mi></mml:math></inline-formula> <bold>(a)</bold> and diahaline entrainment velocity <inline-formula><mml:math id="M265" display="inline"><mml:mrow><mml:msub><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> <bold>(b)</bold> across the isohaline surface of 11 g kg<sup>−1</sup>, averaged over two spring-neap cycles during April 2024 in the lower Elbe River estuary in Germany. The line in both panels shows the 10 m isobath. </p></caption>
          <graphic xlink:href="https://os.copernicus.org/articles/22/1875/2026/os-22-1875-2026-f07.png"/>

        </fig>

</sec>
<sec id="Ch1.S3.SS5">
  <label>3.5</label><title>Estuarine mixing in isohaline volumes</title>
      <p id="d2e8346">Local diahaline mixing as introduced in Sect. <xref ref-type="sec" rid="Ch1.S3.SS4"/> can be expanded to estuarine volumes <xref ref-type="bibr" rid="bib1.bibx161" id="paren.116"/>. The local relation Eq. (<xref ref-type="disp-formula" rid="Ch1.E27"/>) for the total diahaline salt flux <inline-formula><mml:math id="M267" display="inline"><mml:mrow><mml:msub><mml:mi>f</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> can be integrated over the entire isohaline surface to result in

            <disp-formula id="Ch1.E30" content-type="numbered"><label>30</label><mml:math id="M268" display="block"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mi mathvariant="normal">dia</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">dia</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mi>S</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi>J</mml:mi><mml:mi mathvariant="normal">dia</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>J</mml:mi><mml:mi mathvariant="normal">dia</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>S</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mi>S</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi>J</mml:mi><mml:mi mathvariant="normal">dia</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          where <inline-formula><mml:math id="M269" display="inline"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mi mathvariant="normal">dia</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the total salt transport, <inline-formula><mml:math id="M270" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">dia</mml:mi></mml:msub><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula> is the diahaline volume transport, and <inline-formula><mml:math id="M271" display="inline"><mml:mrow><mml:msub><mml:mi>J</mml:mi><mml:mi mathvariant="normal">dia</mml:mi></mml:msub><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula> is the diffusive salt transport across the isohaline surface <xref ref-type="bibr" rid="bib1.bibx161" id="paren.117"><named-content content-type="pre">see Fig. 8a by</named-content></xref>. If instead of a fixed transect T a moving isohaline of salinity <inline-formula><mml:math id="M272" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula> is considered as the seaward boundary of the estuary (see Fig.  <xref ref-type="fig" rid="F3"/>b), the volume and salt budget is of this form:

            <disp-formula id="Ch1.E31" content-type="numbered"><label>31</label><mml:math id="M273" display="block"><mml:mrow><mml:mtable class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">in</mml:mi></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>+</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">out</mml:mi></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>+</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">d</mml:mi><mml:mi>V</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mi mathvariant="normal">d</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">in</mml:mi></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>+</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">out</mml:mi></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mfenced><mml:mi>S</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi>J</mml:mi><mml:mi mathvariant="normal">dia</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">d</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">¯</mml:mo></mml:mover><mml:mi mathvariant="normal">tot</mml:mi></mml:msub><mml:mi>V</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mi mathvariant="normal">d</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:math></disp-formula>

          with the isohaline volume <inline-formula><mml:math id="M274" display="inline"><mml:mrow><mml:mi>V</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, the average salinity inside this volume <inline-formula><mml:math id="M275" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">¯</mml:mo></mml:mover><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, the net advective inflow through the isohaline, <inline-formula><mml:math id="M276" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">in</mml:mi></mml:mrow></mml:msub><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>, and the the net advective outflow through the isohaline, <inline-formula><mml:math id="M277" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">out</mml:mi></mml:mrow></mml:msub><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>. Transformations of Eq. (<xref ref-type="disp-formula" rid="Ch1.E31"/>) show that long-term averaged mixing inside the estuarine volume bounded by an isohaline <inline-formula><mml:math id="M278" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula> is

            <disp-formula id="Ch1.E32" content-type="numbered"><label>32</label><mml:math id="M279" display="block"><mml:mrow><mml:mi mathvariant="double-struck">M</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:munder><mml:mo movablelimits="false">∫</mml:mo><mml:mrow><mml:mi>V</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:munder><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mtext>d</mml:mtext><mml:mi>V</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mi>S</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          which can be seen as a special case of <inline-formula><mml:math id="M280" display="inline"><mml:mrow><mml:mi mathvariant="double-struck">M</mml:mi><mml:mo>≈</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> from Eq. (<xref ref-type="disp-formula" rid="Ch1.E21"/>) with <inline-formula><mml:math id="M281" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mi>S</mml:mi></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx9" id="paren.118"/>. The relation Eq. (<xref ref-type="disp-formula" rid="Ch1.E32"/>) is exact for long-term averaging and zero freshwater transports through the surface and bottom of the estuary. A mixing relation for non-zero river salinity is shown in Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E85"/>).</p>
      <p id="d2e8879">With <inline-formula><mml:math id="M282" display="inline"><mml:mrow><mml:mi mathvariant="double-struck">M</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> being a continuous function of <inline-formula><mml:math id="M283" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula> and assuming that <inline-formula><mml:math id="M284" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is independent of <inline-formula><mml:math id="M285" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula>, we can take the derivative of <inline-formula><mml:math id="M286" display="inline"><mml:mrow><mml:mi>M</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> with respect to <inline-formula><mml:math id="M287" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula>:

            <disp-formula id="Ch1.E33" content-type="numbered"><label>33</label><mml:math id="M288" display="block"><mml:mrow><mml:mi mathvariant="double-struck">m</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi mathvariant="double-struck">M</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>S</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi>S</mml:mi><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          where <inline-formula><mml:math id="M289" display="inline"><mml:mrow><mml:mi mathvariant="double-struck">m</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is the salt mixing per salinity class. It should be noted that <inline-formula><mml:math id="M290" display="inline"><mml:mrow><mml:mi mathvariant="double-struck">m</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> can also be obtained by integrating the local mixing per salinity class <inline-formula><mml:math id="M291" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> from Eq. (<xref ref-type="disp-formula" rid="Ch1.E29"/>) over the projection of the isohaline surface to the horizontal <xref ref-type="bibr" rid="bib1.bibx94" id="paren.119"/>. A discrete version of Eq. (<xref ref-type="disp-formula" rid="Ch1.E33"/>) is sketched in Fig. <xref ref-type="fig" rid="F3"/>c in order to explain the infinitesimal property of the mixing per salinity class. The linear dependence of <inline-formula><mml:math id="M292" display="inline"><mml:mrow><mml:mi mathvariant="double-struck">m</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> on salinity <inline-formula><mml:math id="M293" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula> has been formulated and derived as the <italic>universal law of estuarine mixing</italic> <xref ref-type="bibr" rid="bib1.bibx9" id="paren.120"/>.</p>
      <p id="d2e9070">The relation Eq. (<xref ref-type="disp-formula" rid="Ch1.E33"/>) can be explained by first stating that the volume transport across the isohaline must for long-term averaged conditions equal the river runoff <inline-formula><mml:math id="M294" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. Furthermore, the advective salt transport across the isohaline, <inline-formula><mml:math id="M295" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mi>S</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">in</mml:mi></mml:mrow></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">out</mml:mi></mml:mrow></mml:msub><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mi>S</mml:mi><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, must equal the diahaline diffusive salt transport, such that <inline-formula><mml:math id="M296" display="inline"><mml:mrow><mml:msub><mml:mi>J</mml:mi><mml:mi mathvariant="normal">dia</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mi>S</mml:mi><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, see the second equation in Eq. (<xref ref-type="disp-formula" rid="Ch1.E31"/>). With

            <disp-formula id="Ch1.E34" content-type="numbered"><label>34</label><mml:math id="M297" display="block"><mml:mrow><mml:mi mathvariant="double-struck">m</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msub><mml:mi>J</mml:mi><mml:mi mathvariant="normal">dia</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          which can be derived by integration of Eq. (<xref ref-type="disp-formula" rid="Ch1.E28"/>) over the horizontal projection of the isohaline surface, relation Eq. (<xref ref-type="disp-formula" rid="Ch1.E33"/>) is obtained <xref ref-type="bibr" rid="bib1.bibx21" id="paren.121"/>. A relation equivalent to the combination of Eqs. (<xref ref-type="disp-formula" rid="Ch1.E33"/>) and (<xref ref-type="disp-formula" rid="Ch1.E34"/>) had been derived by <xref ref-type="bibr" rid="bib1.bibx58" id="text.122"/>, based on earlier work of <xref ref-type="bibr" rid="bib1.bibx41" id="text.123"/>, to quantify the turbulent salt transport into river plumes due to entrainment, see the steady-state version of his Eq. (4).</p>
      <p id="d2e9209">To accurately reproduce the universal law by means of models of realistic estuaries such as the Pearl River estuary <xref ref-type="bibr" rid="bib1.bibx94" id="paren.124"/>, the Changjiang River estuary <xref ref-type="bibr" rid="bib1.bibx24" id="paren.125"/> and the Elbe River estuary <xref ref-type="bibr" rid="bib1.bibx135" id="paren.126"/>, averaging over one spring-neap cycle is typically sufficient. In a numerical model, the mixing which a salinity field experiences is the sum of the parameterised physical mixing <inline-formula><mml:math id="M298" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="double-struck">m</mml:mi><mml:mi mathvariant="normal">phy</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and spurious numerical mixing <inline-formula><mml:math id="M299" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="double-struck">m</mml:mi><mml:mi mathvariant="normal">num</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> due to the discretisation of the advection operator, see Sect. <xref ref-type="sec" rid="Ch1.S5.SS2.SSS2"/> for details. Both, relations Eqs. (<xref ref-type="disp-formula" rid="Ch1.E32"/>) and (<xref ref-type="disp-formula" rid="Ch1.E33"/>), are tested for the Elbe estuary in Fig. <xref ref-type="fig" rid="F8"/>. There, it can be seen that the directly computed total mixing quantities <inline-formula><mml:math id="M300" display="inline"><mml:mrow><mml:mi mathvariant="double-struck">M</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M301" display="inline"><mml:mrow><mml:mi mathvariant="double-struck">m</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, each consisting of the sum of numerical and physical mixing, closely follow their respective relation up to the point where the isohaline surfaces partly leave the model domain through the open boundary (grey-shaded areas in the Figure). Here, we first find an underestimation of the predicted mixing by relations Eqs. (<xref ref-type="disp-formula" rid="Ch1.E32"/>) and (<xref ref-type="disp-formula" rid="Ch1.E33"/>) which can likely be related to left-over stratification in the German Bight from earlier high-discharge periods entering the model domain via the open boundary and then being mixed away. For very high salinity classes, the mixing in the model is much weaker than the predicted mixing since substantial parts of the isohaline surfaces are outside of the model domain such that most of the potential mixing is not covered by the model. While the Knudsen mixing law Eq. (<xref ref-type="disp-formula" rid="Ch1.E21"/>) is only valid when salinity fluctuations at the open boundary are limited, the universal law of estuarine mixing, Eqs. (<xref ref-type="disp-formula" rid="Ch1.E32"/>) and (<xref ref-type="disp-formula" rid="Ch1.E33"/>), is exact for all estuaries (without relevant freshwater fluxes across the sea surface).</p>
      <p id="d2e9304">One interesting consequence of the universal law of estuarine mixing can be seen by reformulating Eq. (<xref ref-type="disp-formula" rid="Ch1.E33"/>) as

            <disp-formula id="Ch1.E35" content-type="numbered"><label>35</label><mml:math id="M302" display="block"><mml:mrow><mml:mi mathvariant="double-struck">m</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mi mathvariant="double-struck">v</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">χ</mml:mi><mml:mo mathvariant="normal">¯</mml:mo></mml:mover><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi>S</mml:mi><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          where <inline-formula><mml:math id="M303" display="inline"><mml:mrow><mml:mi mathvariant="double-struck">v</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is the volume per salinity class and <inline-formula><mml:math id="M304" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">χ</mml:mi><mml:mo mathvariant="normal">¯</mml:mo></mml:mover><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is the salinity mixing averaged over the salinity class <inline-formula><mml:math id="M305" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula>. Since for long-term averages <inline-formula><mml:math id="M306" display="inline"><mml:mrow><mml:mi mathvariant="double-struck">v</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">χ</mml:mi><mml:mo mathvariant="normal">¯</mml:mo></mml:mover><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is fixed, Eq. (<xref ref-type="disp-formula" rid="Ch1.E35"/>) means that at low mixing rates <inline-formula><mml:math id="M307" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">χ</mml:mi><mml:mo mathvariant="normal">¯</mml:mo></mml:mover><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> the volumes per salinity class should be large, with the consequence that at low mixing rates, isohaline spacing should be wide. When comparing for example the salinity fields for the Hudson River estuary for neap tide and for spring tide <xref ref-type="bibr" rid="bib1.bibx166" id="paren.127"/>, the isohaline spacing at springs is wider than at neaps. Assuming that storage terms do not play an essential role for these situations, the conclusion could be drawn that average mixing is smaller at springs than at neaps. This is consistent with the findings of <xref ref-type="bibr" rid="bib1.bibx168" id="text.128"/> who find that maximum mixing occurs during late neap tides, see also Sect. <xref ref-type="sec" rid="Ch1.S4.SS1.SSS2"/>. This is also in line with the study of <xref ref-type="bibr" rid="bib1.bibx41" id="text.129"/> who showed that increased (background) diffusivity would reduce the area of a river plume <xref ref-type="bibr" rid="bib1.bibx95" id="paren.130"><named-content content-type="pre">see also the river plume study by</named-content><named-content content-type="post">who showed that additional mixing due to islands in the plume region can reduce the plume area and volume</named-content></xref>.</p>

      <fig id="F8" specific-use="star"><label>Figure 8</label><caption><p id="d2e9474">Salt mixing from a realistic numerical simulation of the Elbe River estuary, averaged for the full month of April 2024. <bold>(a)</bold> Integrated mixing <inline-formula><mml:math id="M308" display="inline"><mml:mrow><mml:mi mathvariant="double-struck">M</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> within an estuarine volume bounded by an isohaline surface of salinity <inline-formula><mml:math id="M309" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula> as computed directly from numerical model data (solid black line) as well as from the freshwater discharge <inline-formula><mml:math id="M310" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> using equation Eq. (<xref ref-type="disp-formula" rid="Ch1.E32"/>) (dashed line). <bold>(b)</bold> Mixing per salinity class <inline-formula><mml:math id="M311" display="inline"><mml:mrow><mml:mi mathvariant="double-struck">m</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> as computed directly from numerical model data (solid black line) as well as from the universal law of estuarine mixing, Eq. (<xref ref-type="disp-formula" rid="Ch1.E33"/>) (dashed line). In each panel, the respective contributions of the physical mixing <inline-formula><mml:math id="M312" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="double-struck">M</mml:mi><mml:mi mathvariant="normal">phy</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M313" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="double-struck">m</mml:mi><mml:mi mathvariant="normal">phy</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> due to the mixing parameterisation as well as the numerical mixing <inline-formula><mml:math id="M314" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="double-struck">M</mml:mi><mml:mi mathvariant="normal">num</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M315" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="double-struck">m</mml:mi><mml:mi mathvariant="normal">num</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> due to discretisation errors to the total diagnosed mixing are shown as solid grey lines.</p></caption>
          <graphic xlink:href="https://os.copernicus.org/articles/22/1875/2026/os-22-1875-2026-f08.png"/>

        </fig>

</sec>
<sec id="Ch1.S3.SS6">
  <label>3.6</label><title>Relating estuarine circulation to mixing</title>
      <p id="d2e9593">In his famous abyssal recipes <xref ref-type="bibr" rid="bib1.bibx115" id="text.131"/> fitted a vertical one-dimensional advection-diffusion equation to hydrographic observations in the central Pacific Ocean and concluded that turbulent mixing with an effective vertical diffusivity of <inline-formula><mml:math id="M316" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.3</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> m<sup>2</sup> s<sup>−1</sup> would be needed to explain the global overturning circulation. In later studies, the decomposition of the underlying mixing processes into wind and tidal mixing and their regional distribution had been further specified <xref ref-type="bibr" rid="bib1.bibx116 bib1.bibx81 bib1.bibx118 bib1.bibx23" id="paren.132"><named-content content-type="pre">see e.g.,</named-content></xref>. On the much smaller scales of estuaries, the same must be postulated: estuarine circulation requires mixing and vice versa. Here, we discuss different concepts of this duality.</p>
      <p id="d2e9643">Let us first summarise what we have discussed about this issue until now. In his fundamental paper, <xref ref-type="bibr" rid="bib1.bibx80" id="text.133"/> already stated that estuarine circulation is associated with mixing (Sect. <xref ref-type="sec" rid="Ch1.S1"/>). The general process is that salty ocean water entering the estuary is first mixed with fresh river water inside the estuary and then ejected as brackish water towards the ocean, making estuaries mixing machines <xref ref-type="bibr" rid="bib1.bibx104 bib1.bibx164" id="paren.134"/>. When there is no mixing inside the estuary, then no further salty water can enter the estuary in the long term (Sect. <xref ref-type="sec" rid="Ch1.S3.SS3"/>). In that sense, the volume transport of salty water flowing into the estuary, <inline-formula><mml:math id="M319" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, is a good measure for the estuarine circulation <xref ref-type="bibr" rid="bib1.bibx8 bib1.bibx107" id="paren.135"/>. A first quantitative estimate for the tight relationship between estuarine circulation and mixing has been established in the third relation of Eq. (<xref ref-type="disp-formula" rid="Ch1.E21"/>) by <xref ref-type="bibr" rid="bib1.bibx109" id="text.136"/>, showing a proportionality between the bulk mixing <inline-formula><mml:math id="M320" display="inline"><mml:mi mathvariant="double-struck">M</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M321" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, with <inline-formula><mml:math id="M322" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub><mml:mo>)</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> as factor of proportionality.</p>
      <p id="d2e9721">The streamfunction <inline-formula><mml:math id="M323" display="inline"><mml:mrow><mml:mi>Q</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> of the estuarine circulation as defined in Eq. (<xref ref-type="disp-formula" rid="Ch1.E14"/>) is the time-averaged volume transport into the estuary across a fixed transect for all salinities above <inline-formula><mml:math id="M324" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula> and therefore contains the information about the Total Exchange Flow, see Sect. <xref ref-type="sec" rid="Ch1.S3.SS2"/> for details. It can be directly linked to mixing, as derived already by <xref ref-type="bibr" rid="bib1.bibx161" id="text.137"/> to quantify the overturning circulation of the Baltic Sea:

            <disp-formula id="Ch1.E36" content-type="numbered"><label>36</label><mml:math id="M325" display="block"><mml:mrow><mml:mi>Q</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">est</mml:mi></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>J</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">est</mml:mi></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>S</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi mathvariant="double-struck">m</mml:mi><mml:mi mathvariant="normal">est</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>S</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          where the subscript <sub>est</sub> means that diahaline transport <inline-formula><mml:math id="M327" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">dia</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, diahaline salt flux <inline-formula><mml:math id="M328" display="inline"><mml:mrow><mml:msub><mml:mi>J</mml:mi><mml:mi mathvariant="normal">dia</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and diahaline mixing per salinity class <inline-formula><mml:math id="M329" display="inline"><mml:mi mathvariant="double-struck">m</mml:mi></mml:math></inline-formula> are only considered for the part of the isohaline that is located on the estuarine side of the transect, see Fig. <xref ref-type="fig" rid="F9"/>. The first equality in Eq. (<xref ref-type="disp-formula" rid="Ch1.E36"/>) is demonstrated in Fig. <xref ref-type="fig" rid="F9"/>a: under long-term averaged conditions the volume transport <inline-formula><mml:math id="M330" display="inline"><mml:mrow><mml:mi>Q</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> into the subvolume bounded by the transect T, the isohaline <inline-formula><mml:math id="M331" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula> and the bottom must be equal to the volume transport across the isohaline <inline-formula><mml:math id="M332" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M333" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">est</mml:mi></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. The second equality in Eq. (<xref ref-type="disp-formula" rid="Ch1.E36"/>) results from the integration of the entrainment relation Eq. (<xref ref-type="disp-formula" rid="Ch1.E26"/>) over the projection of the isohaline part situated upstream of the transect T. The third relation of Eq. (<xref ref-type="disp-formula" rid="Ch1.E36"/>) which had not been proposed by <xref ref-type="bibr" rid="bib1.bibx161" id="text.138"/> is simply the <inline-formula><mml:math id="M334" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula>-derivative of Eq. (<xref ref-type="disp-formula" rid="Ch1.E34"/>) restricted to the upstream part of the estuary. <xref ref-type="bibr" rid="bib1.bibx161" id="text.139"/> stated about this relation (his Eq. 7): <italic>Equation</italic> (<xref ref-type="disp-formula" rid="Ch1.E36"/>) <italic>represents in the most simple way how the deep water supply is related to the overall vertical (i.e. cross-isohaline) mixing properties in the basin.</italic> What <xref ref-type="bibr" rid="bib1.bibx161" id="text.140"/> specifically calls the <italic>deep water supply</italic> to the Central Baltic Sea is more generally the up-estuarine part of the estuarine circulation. Note that independently of <xref ref-type="bibr" rid="bib1.bibx161" id="text.141"/>, <xref ref-type="bibr" rid="bib1.bibx164" id="text.142"/> used the first two equalities of Eq. (<xref ref-type="disp-formula" rid="Ch1.E36"/>) to calculate exchange flow accumulated between two estuarine segments.</p>
      <p id="d2e9990">When choosing the dividing salinity <inline-formula><mml:math id="M335" display="inline"><mml:mrow><mml:mi>S</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">div</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> for relation Eq. (<xref ref-type="disp-formula" rid="Ch1.E36"/>) with <inline-formula><mml:math id="M336" display="inline"><mml:mrow><mml:mi>Q</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">div</mml:mi></mml:msub><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (see Sect. <xref ref-type="sec" rid="Ch1.S3.SS2"/>), then the quantification of the estuarine circulation is directly linked to mixing:

            <disp-formula id="Ch1.E37" content-type="numbered"><label>37</label><mml:math id="M337" display="block"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>J</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">est</mml:mi></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">div</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>S</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi mathvariant="double-struck">m</mml:mi><mml:mi mathvariant="normal">est</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">div</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>S</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          see details in <xref ref-type="bibr" rid="bib1.bibx22" id="text.143"/> and Fig. <xref ref-type="fig" rid="F9"/>b. The significance of Eq. (<xref ref-type="disp-formula" rid="Ch1.E37"/>) is that it is a direct quantification of the estuarine circulation (defined as <inline-formula><mml:math id="M338" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) by means of the (<inline-formula><mml:math id="M339" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula>-gradient of the) diahaline mixing. This relation is directly applicable to simple estuaries with a typical two-layer exchange flow, but has also been extended to multi-layer exchange flow <xref ref-type="bibr" rid="bib1.bibx22" id="paren.144"/>. For the Elbe River estuary, relation Eq. (<xref ref-type="disp-formula" rid="Ch1.E37"/>) is demonstrated in Fig. <xref ref-type="fig" rid="F10"/>.</p>

      <fig id="F9" specific-use="star"><label>Figure 9</label><caption><p id="d2e10153">Sketch showing the relation between estuarine circulation and diahaline mixing. <bold>(a)</bold> Demonstration of the relation Eq. (<xref ref-type="disp-formula" rid="Ch1.E36"/>) by <xref ref-type="bibr" rid="bib1.bibx161" id="text.145"/>. <bold>(b)</bold> Demonstration of the relation Eq. (<xref ref-type="disp-formula" rid="Ch1.E37"/>) by <xref ref-type="bibr" rid="bib1.bibx22" id="text.146"/> using the dividing salinity isohaline to quantify the exchange flow by means of <inline-formula><mml:math id="M340" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. </p></caption>
          <graphic xlink:href="https://os.copernicus.org/articles/22/1875/2026/os-22-1875-2026-f09.png"/>

        </fig>

      <fig id="F10"><label>Figure 10</label><caption><p id="d2e10192">The relation Eq. (<xref ref-type="disp-formula" rid="Ch1.E37"/>) between estuarine circulation (quantified as the inflowing volume transport <inline-formula><mml:math id="M341" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) and estuarine mixing (quantified as <inline-formula><mml:math id="M342" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="double-struck">m</mml:mi><mml:mi mathvariant="normal">est</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>), averaged over two spring-neap cycles during April 2024 in the lower Elbe River estuary in Germany. </p></caption>
          <graphic xlink:href="https://os.copernicus.org/articles/22/1875/2026/os-22-1875-2026-f10.png"/>

        </fig>

</sec>
<sec id="Ch1.S3.SS7">
  <label>3.7</label><title>Mixing of other constituents than salt</title>
      <p id="d2e10233">This review focuses on mixing of salt. The reason is that salinity is the defining constituent of estuaries, continuously ranging from minimum values near zero in the river water towards ocean salinity values near the mouth of the estuary or in the river plume. Therefore, salinity can be used as a coordinate in estuaries <xref ref-type="bibr" rid="bib1.bibx161" id="paren.147"/> substituting spatial coordinates. Also, salinity is conservative with basically no inner sinks and sources, and also bottom and surface fluxes of salt are negligible. However, many other constituents are mixing in estuaries, such as heat, oxygen, nutrients, and pollutants. Based on the work of <xref ref-type="bibr" rid="bib1.bibx161" id="text.148"><named-content content-type="post">salinity coordinates</named-content></xref> and <xref ref-type="bibr" rid="bib1.bibx162" id="text.149"><named-content content-type="post">temperature coordinates</named-content></xref>, for larger ocean scales, theoretical Water Mass Transformation (WMT) frameworks have been developed to analyse mixing of constituents other than salt <xref ref-type="bibr" rid="bib1.bibx59 bib1.bibx55" id="paren.150"/>. To evaluate non-conservative behaviour of estuarine tracers due to sources or sinks, such tracers are often represented as function of salinity <xref ref-type="bibr" rid="bib1.bibx7" id="paren.151"/>. By doing so, non-conservative tracer mixing is identified by a non-linear relation between tracer concentration and salinity. However, as shown by <xref ref-type="bibr" rid="bib1.bibx96" id="text.152"/>, such non-linear behaviour could also be caused by tracer variability in the freshwater source of the estuary. There is a large body of literature about effects of estuarine mixing of tracers other than salt on ecosystem dynamics. For example, <xref ref-type="bibr" rid="bib1.bibx42" id="text.153"/> proposes differential vertical mixing of suspended particulate matter (SPM) as a mechanism of creating Estuarine Turbidity Maxima. Tidal covariance between longitudinal velocity and concentration of SPM due to vertical SPM mixing can lead to up-estuary SPM transport <xref ref-type="bibr" rid="bib1.bibx143" id="paren.154"/>. In a similar way, <xref ref-type="bibr" rid="bib1.bibx145" id="text.155"/> explain the generation of local maxima of carbon dioxide partial pressure in estuaries, the so-called Estuarine Gas Exchange Maxima. Nitrogen-to-phosphate ratios in estuaries has been shown to critically depend on tidal mixing <xref ref-type="bibr" rid="bib1.bibx101" id="paren.156"/>. These are just a few examples which show the essential role of mixing of tracers other than salt in estuaries. However, a general theory for such tracer mixing has not yet been proposed. </p>
</sec>
</sec>
<sec id="Ch1.S4">
  <label>4</label><title>Major mixing processes and estuarine mixing hotspots</title>
      <p id="d2e10281">In the previous chapters we have presented various local and bulk theories of mixing and showed examples for the Elbe River estuary. These theories and examples prove that mixing, defined as integrated or local salinity variance decay due to turbulent processes, is an ubiquitous element in estuaries. Moreover, mixing defines what an estuary, consisting of a mixture of ocean and river water, is. While we know from the bulk mixing rules for estuaries, e.g., the <italic>Knudsen mixing law</italic> Eq. (<xref ref-type="disp-formula" rid="Ch1.E21"/>) or the <italic>universal law of estuarine mixing</italic> Eq. (<xref ref-type="disp-formula" rid="Ch1.E33"/>), how strong the overall mixing is in an estuary, we need to understand where the mixing occurs in time and space and which processes drive it. The intensity of mixing in an estuary is dictated by Eq. (<xref ref-type="disp-formula" rid="Ch1.E10"/>), <inline-formula><mml:math id="M343" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>≈</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mo>∂</mml:mo><mml:mi>s</mml:mi><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mi>z</mml:mi><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>, indicating that mixing depends linearly on the intensity of turbulence, as expressed by the vertical diffusivity, and quadratically on the strength of the vertical salinity gradient. Typically in estuaries, the stronger the turbulence, the weaker the vertical salinity gradient, so it is not obvious a priori where and when mixing will be maximal in an estuary.  In this section, the mixing in the Elbe estuary (and in one case that of the James River estuary) is used to provide an example of the various factors influencing the temporal and spatial variation of mixing in a partially mixed estuary.</p>
<sec id="Ch1.S4.SS1">
  <label>4.1</label><title>Temporal variability</title>
      <p id="d2e10341">In estuaries, various time scales are relevant, including semi-diurnal tidal time scales and the fortnightly spring-neap cycle as well as times scales of weather and river-run-off (days to months). In the subsequent sections, the most relevant processes on these time scales are discussed.</p>

      <fig id="F11"><label>Figure 11</label><caption><p id="d2e10346"> Dynamics of vertical salinity variance, spatially averaged over the Elbe River estuary domain between river kilometres 85 and 160, during four tidal cycles. <bold>(a)</bold> Vertical salinity variance; <bold>(b)</bold> Terms in the variance budget Eq. (<xref ref-type="disp-formula" rid="Ch1.E12"/>); <bold>(c)</bold> Straining term split into longitudinal and lateral components. </p></caption>
          <graphic xlink:href="https://os.copernicus.org/articles/22/1875/2026/os-22-1875-2026-f11.png"/>

        </fig>

<sec id="Ch1.S4.SS1.SSS1">
  <label>4.1.1</label><title>Tidal variability</title>
      <p id="d2e10373">An analysis of the tidal cycle of the vertical salinity variance in the Elbe River estuary using Eq. (<xref ref-type="disp-formula" rid="Ch1.E12"/>) averaged over most of the estuary demonstrates the sequence of processes driving mixing (Fig. <xref ref-type="fig" rid="F11"/>).</p>
      <p id="d2e10380">Panel (a) of Fig. <xref ref-type="fig" rid="F11"/> indicates that the vertical variance shows considerable variation through the tidal cycle, sharply rising at the end of flood, then decreasing to a minimum near the end of ebb. Panel (b) of Fig. <xref ref-type="fig" rid="F11"/> shows the individual terms in the vertical variance balance Eq. (<xref ref-type="disp-formula" rid="Ch1.E12"/>). Lateral straining is strongest during the flood tide (Fig. <xref ref-type="fig" rid="F11"/>c). It accounts for most of the increase in stratification (as expressed by total vertical variance) toward the end of the flood tide, but it has little correspondence with mixing. This contribution of lateral straining has been observed in other estuaries <xref ref-type="bibr" rid="bib1.bibx130 bib1.bibx46" id="paren.157"/>, with the important consequence that it produces a maximum in stratification at the beginning of the ebb tide. The longitudinal strain is actually negative during the flood (i.e., weakening stratification), but it is strongly positive during the ebb. This is the well-known signal of tidal straining, first described by <xref ref-type="bibr" rid="bib1.bibx147" id="text.158"/>. Particularly notable are the mid-ebb peaks in mixing, which are almost exactly in phase with the peak in longitudinal straining. This correspondence between longitudinal straining during the ebb and estuarine mixing has been found in other partially mixed estuaries including the Hudson River estuary <xref ref-type="bibr" rid="bib1.bibx163 bib1.bibx168" id="paren.159"/> and also the more strongly stratified Changjiang River estuary <xref ref-type="bibr" rid="bib1.bibx93" id="paren.160"/> and Connecticut River estuary <xref ref-type="bibr" rid="bib1.bibx61" id="paren.161"/>. </p>
      <p id="d2e10408">Why is longitudinal straining so effective at increasing estuarine mixing?  Going back to Eq. (<xref ref-type="disp-formula" rid="Ch1.E10"/>), we see that the intensity of mixing depends more sensitively on stratification than on the turbulence itself, although both are necessary to generate mixing. The positive strain that occurs during the ebb provides a continual source of stratification, which roughly balances the destruction of stratification by mixing during a significant fraction of the ebb tide (the times when the longitudinal strain and mixing have equal magnitude in Fig. <xref ref-type="fig" rid="F11"/>). Paradoxically, the increased stratification during the ebb actually has an inhibitory influence on turbulence, but this inhibition of turbulence causes an enhancement of the vertical shear during the ebb. Figure <xref ref-type="fig" rid="F12"/> shows representative vertical profiles of velocity <inline-formula><mml:math id="M344" display="inline"><mml:mi>u</mml:mi></mml:math></inline-formula>, salinity <inline-formula><mml:math id="M345" display="inline"><mml:mi>s</mml:mi></mml:math></inline-formula>, eddy diffusivity <inline-formula><mml:math id="M346" display="inline"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and mixing <inline-formula><mml:math id="M347" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> during flood and ebb in the Elbe estuary. The strong mixing that occurs during the ebb is found in the stratified boundary layer, in which the eddy diffusivity is actually much weaker than its value during the flood tide. The key to the mixing is the persistence of stratification, which is maintained by the strong shear that strains the along-estuary density gradient. Even though turbulence is weakened by stratification, it is not completely suppressed, due to the turbulence production originating from the bottom stress. During the flood tide, the boundary layer produces virtually no mixing, due to the absence of stratification. The only significant mixing occurs in the pycnocline when the well-mixed highly turbulent bottom boundary layer is entraining into the stratified layer above, where the turbulence is much weaker than the boundary layer but the stratification is strong. This shows that maximum mixing does not occur at the maxima of eddy diffusivity or salinity stratification, but at locations where both overlap  <xref ref-type="bibr" rid="bib1.bibx168" id="paren.162"><named-content content-type="pre">see also</named-content><named-content content-type="post">who report similar results for the Hudson River estuary</named-content></xref>.</p>

      <fig id="F12" specific-use="star"><label>Figure 12</label><caption><p id="d2e10464">Simulated vertical profiles of <bold>(a)</bold> the along-channel current velocity <inline-formula><mml:math id="M348" display="inline"><mml:mi>u</mml:mi></mml:math></inline-formula>, <bold>(b)</bold> salinity <inline-formula><mml:math id="M349" display="inline"><mml:mi>s</mml:mi></mml:math></inline-formula>, <bold>(c)</bold> vertical eddy viscosity <inline-formula><mml:math id="M350" display="inline"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, and <bold>(d)</bold> local salt mixing <inline-formula><mml:math id="M351" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> from a near-shoal location within the inner Elbe River estuary at along-channel position <inline-formula><mml:math id="M352" display="inline"><mml:mrow><mml:mi>x</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">127</mml:mn></mml:mrow></mml:math></inline-formula> km for ebb (blue) and flood (red), respectively, during a neap tidal cycle. The data was averaged over five neighbouring grid cells, corresponding to an along-channel distance of <inline-formula><mml:math id="M353" display="inline"><mml:mn mathvariant="normal">360</mml:mn></mml:math></inline-formula> m. Temporally, the data was averaged for one hour around peak ebb and peak flood, respectively. </p></caption>
            <graphic xlink:href="https://os.copernicus.org/articles/22/1875/2026/os-22-1875-2026-f12.png"/>

          </fig>

</sec>
<sec id="Ch1.S4.SS1.SSS2">
  <label>4.1.2</label><title>Spring-neap cycle</title>
      <p id="d2e10550">The spring-neap cycle of tidal amplitude variation results in a large variation in the intensity of mixing, as shown in a timeseries based on the numerical model of the Elbe estuary. As often observed in partially mixed estuaries, the stratification (as represented by vertical variance, Fig. <xref ref-type="fig" rid="F13"/>b) shows a large variation over the spring-neap cycle, with a sharp peak in stratification each neap tide. Again we have the paradoxical result that the peak mixing occurs during neap tides (Fig. <xref ref-type="fig" rid="F13"/>c), when turbulent intensity is the weakest. Returning to Eq. (<xref ref-type="disp-formula" rid="Ch1.E10"/>), the mixing depends on the square of the vertical salinity gradient but only linearly on the eddy diffusivity. According to estuarine theory, stratification varies roughly as <inline-formula><mml:math id="M354" display="inline"><mml:mrow><mml:msubsup><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx106" id="paren.163"/>, so the increased stratification is a much more important contributor to mixing than <inline-formula><mml:math id="M355" display="inline"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> through the spring neap cycle.</p>
      <p id="d2e10590">The timeseries of longitudinal strain through the spring-neap cycle (Fig. <xref ref-type="fig" rid="F13"/>c) shows that it has similar spring-neap variation as mixing. The strain is a key ingredient for mixing – without it the stratification would vanish and there would be nothing to mix. The strain increases during neap tides due to the increased stratification, which augments the horizontal strain term in Eq. (<xref ref-type="disp-formula" rid="Ch1.E12"/>) directly by the increase in <inline-formula><mml:math id="M356" display="inline"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">v</mml:mi><mml:mo>′</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>, and indirectly by the stratification-induced reduction in eddy viscosity, which increases <inline-formula><mml:math id="M357" display="inline"><mml:mrow><mml:msubsup><mml:mi>u</mml:mi><mml:mi mathvariant="normal">v</mml:mi><mml:mo>′</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx106" id="paren.164"/>.</p>
      <p id="d2e10626">Other estuaries show a different phase relationship between mixing and the spring-neap cycle. For example, in the Hudson River estuary the peak mixing occurs between neaps and springs <xref ref-type="bibr" rid="bib1.bibx163" id="paren.165"/>, and in the Changjiang River estuary outflow the peak mixing occurs during spring tides <xref ref-type="bibr" rid="bib1.bibx93" id="paren.166"/>. These variations in the timing of mixing are related to the relative strength of tidal forcing to the stratifying tendency of the estuarine circulation. This balance is represented by the Simpson number as defined in Eq. (<xref ref-type="disp-formula" rid="Ch1.E13"/>). In the Elbe River estuary, <inline-formula><mml:math id="M358" display="inline"><mml:mrow><mml:mi>S</mml:mi><mml:mi>i</mml:mi></mml:mrow></mml:math></inline-formula> remains low for most of the spring-neap cycle, with strong stratification only occurring around the time of neap tides. The Hudson River estuary has higher values of <inline-formula><mml:math id="M359" display="inline"><mml:mrow><mml:mi>S</mml:mi><mml:mi>i</mml:mi></mml:mrow></mml:math></inline-formula>, and the Changjiang higher still, leading to persistent stratification through the spring-neap cycle <xref ref-type="bibr" rid="bib1.bibx93" id="paren.167"/>. A closer look into the dynamics of the Changjiang River estuary reveals that most of the mixing occurs outside the estuary in the extensive river plume, due to the high river discharge <xref ref-type="bibr" rid="bib1.bibx93 bib1.bibx24" id="paren.168"/>. In the sense of the universal law of estuarine mixing (32), this can also be formulated as follows: Since the estuary is relatively fresh during high-flow conditions, mixing inside the estuary is small. Therefore strong mixing must occur outside the estuary, i.e. in the river plume, to amount to <inline-formula><mml:math id="M360" display="inline"><mml:mrow><mml:mi mathvariant="double-struck">M</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:msup><mml:mi>S</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, where here <inline-formula><mml:math id="M361" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula> is a salinity separating the estuary – river plume continuum from the adjacent coastal ocean. In this high <inline-formula><mml:math id="M362" display="inline"><mml:mrow><mml:mi>S</mml:mi><mml:mi>i</mml:mi></mml:mrow></mml:math></inline-formula> regime, the strength of the turbulence becomes the limiting factor controlling mixing, leading to the peak mixing during spring tides.</p>
      <p id="d2e10707">Although these studies did not investigate the processes of mixing in detail, neap tidal turbulence might not be sufficiently strong to entrain the turbulent bottom boundary layer into the region of the surface-attached buoyant plume and cause mixing. Therefore, substantial near-surface salinity stratification remains until spring tides reduce it by mixing. In general it could be hypothesised that in tidally energetic estuaries vertical salinity variance is mixed away immediately once it is generated by straining during neap tides, as in the Elbe, Hudson and Pearl River estuaries. In stratified estuaries, this mixing process is delayed until spring-tide turbulence can efficiently mix, as in the Changjiang River estuary.</p>

      <fig id="F13" specific-use="star"><label>Figure 13</label><caption><p id="d2e10713"> Dynamics of vertical salinity variance, spatially averaged over the Elbe River estuary domain between river kilometres 85 and 160, during four selected spring-neap cycles, as well as forcing conditions. <bold>(a)</bold> Runoff and wind speed; <bold>(b)</bold> vertical salinity variance and longitudinal tidal velocity amplitude; <bold>(c)</bold> terms of the vertical salinity budget according to Eq. (<xref ref-type="disp-formula" rid="Ch1.E12"/>). </p></caption>
            <graphic xlink:href="https://os.copernicus.org/articles/22/1875/2026/os-22-1875-2026-f13.png"/>

          </fig>

</sec>
<sec id="Ch1.S4.SS1.SSS3">
  <label>4.1.3</label><title>Variation with variance input and direct meteorological forcing</title>
      <p id="d2e10741">In estuaries, there are four boundaries through which salinity variance can be introduced: the river boundary (river discharge), the seaward boundary (salinity fluctuations at the mouth), the sea surface (evaporation and precipitation) and the bottom (groundwater discharge, which we do not further consider here).</p>
      <p id="d2e10744">The bulk mixing laws for estuaries show clearly that under balanced conditions, mixing should be proportional to the river runoff <inline-formula><mml:math id="M363" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. This is obvious from the <italic>Knudsen mixing law</italic> in an estuarine volume bounded by a fixed transect, <inline-formula><mml:math id="M364" display="inline"><mml:mrow><mml:mi mathvariant="double-struck">M</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub><mml:msub><mml:mi>s</mml:mi><mml:mrow><mml:mi mathvariant="normal">ou</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:msub><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, <xref ref-type="bibr" rid="bib1.bibx109" id="paren.169"><named-content content-type="pre">see Eq. (<xref ref-type="disp-formula" rid="Ch1.E21"/>) as proposed by</named-content></xref> and for the <italic>universal law of estuarine mixing</italic> inside a volume bounded by an isohaline surface of salinity <inline-formula><mml:math id="M365" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M366" display="inline"><mml:mrow><mml:mi mathvariant="double-struck">M</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:msup><mml:mi>S</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, <xref ref-type="bibr" rid="bib1.bibx9" id="paren.170"><named-content content-type="pre">see Eq. (<xref ref-type="disp-formula" rid="Ch1.E32"/>) as proposed by</named-content></xref>. Since these two theories are based on long-term averaging, time lags between changes in runoff and changes in mixing are expected due to the storage of volume, salt and salinity variance <xref ref-type="bibr" rid="bib1.bibx8" id="paren.171"/>. The dependence of mixing on runoff has most impressively been shown in the study by <xref ref-type="bibr" rid="bib1.bibx8" id="text.172"/> for the Puget Sound: When the runoff during summer becomes four times larger than the spring runoff, mixing increases roughly by the same factor, showing a much stronger signal than the spring-neap cycle. This is specifically supported by the universal law Eq. (<xref ref-type="disp-formula" rid="Ch1.E32"/>): Since the salinity at the mouth of the large Puget Sound might not change much, the volume-integrated mixing should be largely proportional to the river discharge. Similarly, the Elbe River estuary simulations show higher neap-tide mixing peaks during high runoff than during low runoff (Figs. <xref ref-type="fig" rid="F13"/>a, c), which is consistent with the estuarine mixing laws Eqs. (<xref ref-type="disp-formula" rid="Ch1.E21"/>) and (<xref ref-type="disp-formula" rid="Ch1.E32"/>).</p>
      <p id="d2e10855">In estuaries salinity fluctuations at the open ocean boundary are typically small and fluctuating with the tidal flow. In addition, salinity might vary with the dynamics of wind-driven upwelling and downwelling. An extreme example of the latter is the essentially non-tidal and highly industrialised Warnow River estuary in the Western Baltic Sea where downwelling events can decrease the offshore salinity from 20  to 8 g kg<sup>−1</sup> within a few hours <xref ref-type="bibr" rid="bib1.bibx83" id="paren.173"/>, leading to substantial salinity variance changes in the estuary and an inversion of estuarine circulation. This variance input has also strong impacts on the mixing in the estuary <xref ref-type="bibr" rid="bib1.bibx22" id="paren.174"/>.</p>
      <p id="d2e10876">Evaporation and precipitation should have an effect on estuarine mixing by affecting the variance input available for mixing, see the extended Knudsen mixing law Eq. (<xref ref-type="disp-formula" rid="Ch1.E24"/>). For classical freshwater-dominated tidal estuaries we are not aware of dedicated studies of this effect, although the good agreement between the simulated mixing (including precipitation and evaporation) and the estimate Eq. (<xref ref-type="disp-formula" rid="Ch1.E32"/>) (which neglects precipitation and evaporation) in studies of such estuaries by <xref ref-type="bibr" rid="bib1.bibx94" id="text.175"/> and <xref ref-type="bibr" rid="bib1.bibx135" id="text.176"/> indicates that its impact may be negligible. For the Persian Gulf, a large inverse estuary with some freshwater inflow, <xref ref-type="bibr" rid="bib1.bibx99" id="text.177"/> applied Eq. (<xref ref-type="disp-formula" rid="Ch1.E24"/>) and estimated that evaporation caused about half of the variance input for mixing, with the other half generated by the freshwater runoff. This ratio between the two mixing contributions needs to be compared to the ratio of the freshwater transports due to evaporation (<inline-formula><mml:math id="M368" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">surf</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) and river discharge  (<inline-formula><mml:math id="M369" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>), which is <inline-formula><mml:math id="M370" display="inline"><mml:mrow><mml:mn mathvariant="normal">10</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> for the Persian Gulf. This implies that indeed, mixing of variance input from evaporation should generally have the tendency to be small compared to mixing caused by river discharge.</p>
      <p id="d2e10932">The effect of wind forcing on estuarine mixing has not yet been a focus of dedicated studies. Wind forcing can generally have two competing effects: straining of the salinity field and mixing <xref ref-type="bibr" rid="bib1.bibx144 bib1.bibx25" id="paren.178"/>. Down-estuary wind forcing has a similar effect to ebb tidal straining by shearing less dense brackish water over dense ocean water and suppressing turbulence <xref ref-type="bibr" rid="bib1.bibx43" id="paren.179"><named-content content-type="pre">Sect. <xref ref-type="sec" rid="Ch1.S4.SS1.SSS1"/> and</named-content></xref>. When a certain threshold is exceeded, the mixing effect of wind forcing would win over the straining effect, such that strong down-estuary winds are expected to be destratifying. In contrast to that, up-estuary winds have the same effect as flood straining and are therefore always destratifying. In a correlation analysis, <xref ref-type="bibr" rid="bib1.bibx8" id="text.180"/> showed that wind forcing has some effect on mixing in Puget Sound, which however is dominated by the river runoff forcing. For a small weakly tidal estuary <xref ref-type="bibr" rid="bib1.bibx172" id="text.181"/> described the effect of wind pumping (covariance between wind stress and flow velocity) as an effective mechanism of up-estuarine salt transport which eventually will lead to increased salt mixing. However, in the tidally more energetic Elbe River estuary no obvious influence of the wind forcing is visible (compare Fig. <xref ref-type="fig" rid="F13"/>a and c), although this has not yet been investigated by means of a correlation analysis.</p>
</sec>
</sec>
<sec id="Ch1.S4.SS2">
  <label>4.2</label><title>Spatial variations</title>
      <p id="d2e10962">If estuaries had a flat bottom, their dynamics could be largely explained by means of one-dimensional or two-dimensional models without lateral variations. However, most estuaries are characterised by one or more deep channels (often deepened due to dredging) in longitudinal direction which carry most of the tidal flow. Shoals at the sides and between the channels lead to a typical channel-shoal structure where the channel-shoal transition leads to dynamic processes crucial to estuarine circulation and mixing (Sect. <xref ref-type="sec" rid="Ch1.S4.SS2.SSS1"/>). But also in longitudinal direction, estuaries are not smooth. Channels often show a strong along-channel variability, e.g., due to constrictions in width and depth leading to local fronts and enhanced mixing (Sect. <xref ref-type="sec" rid="Ch1.S4.SS2.SSS2"/>).</p>
<sec id="Ch1.S4.SS2.SSS1">
  <label>4.2.1</label><title>Channel-shoal interaction</title>
      <p id="d2e10976">Since flood and ebb currents in the tidal channels are faster than over the shoals, a significant lateral velocity gradient evolves over the channel-shoal transition (Fig. <xref ref-type="fig" rid="F14"/>a). During flood, this velocity shear in conjunction with the longitudinal salinity gradient leads to a faster increase of the salinity in the channel than on the shoal <xref ref-type="bibr" rid="bib1.bibx67 bib1.bibx47" id="paren.182"><named-content content-type="pre">differential advection, see</named-content></xref>, such that a lateral salinity and thus density and internal pressure gradient is generated (Fig. <xref ref-type="fig" rid="F14"/>b). The pressure gradient drives a lateral exchange flow leading to the generation of vertical salinity stratification (Fig. <xref ref-type="fig" rid="F14"/>c) which is then mixed due to bottom-generated turbulence over the channel-shoal transition (Fig.  <xref ref-type="fig" rid="F14"/>d). A similar situation occurs during ebb, when differential advection leads to lower salinities in the channel centre as compared to the shoals. This substantially increased mixing over the channel-shoal transition has been shown by means of numerical model simulations for the Hudson River estuary by <xref ref-type="bibr" rid="bib1.bibx168" id="text.183"/> and for the Elbe River estuary by <xref ref-type="bibr" rid="bib1.bibx135 bib1.bibx136" id="text.184"/>. The intensified mixing over the channel-shoal transition in the Elbe River estuary is also demonstrated in Fig. <xref ref-type="fig" rid="F7"/>a. Observations in San Francisco Bay <xref ref-type="bibr" rid="bib1.bibx29" id="paren.185"/> and the James River estuary <xref ref-type="bibr" rid="bib1.bibx65" id="paren.186"/> show enhanced mixing over the channel-shoal transition as well.</p>
      <p id="d2e11007">It should be noted that the lateral shear over the channel-shoal transition during flood is one leg of a lateral circulation across estuaries that leads to strong axial flow convergence near the surface <xref ref-type="bibr" rid="bib1.bibx121" id="paren.187"/>. It was later found that lateral straining is also an important mechanism feeding back into the longitudinal estuarine circulation and up-estuarine salt transport <xref ref-type="bibr" rid="bib1.bibx87 bib1.bibx16 bib1.bibx4" id="paren.188"/>, which indirectly leads to increased salt mixing in estuaries.</p>

      <fig id="F14" specific-use="star"><label>Figure 14</label><caption><p id="d2e11018"> Sketch for explaining the effect of the channel-shoal transition on estuarine mixing during flood. The colour scaling indicates salinity, with dark blue colours representing high salinities. <bold>(a)</bold> early flood, when for simplicity no lateral salinity gradients are assumed; <bold>(b)</bold> full flood, generation of lateral salinity and thus density gradients due to differential advection; <bold>(c)</bold> full flood, lateral exchange flow driven by lateral density gradients leading to vertical stratification; <bold>(d)</bold> vertical shear generates small-scale turbulence which in concert with vertical stratification leads to vertical mixing. </p></caption>
            <graphic xlink:href="https://os.copernicus.org/articles/22/1875/2026/os-22-1875-2026-f14.png"/>

          </fig>

</sec>
<sec id="Ch1.S4.SS2.SSS2">
  <label>4.2.2</label><title>Mixing at fronts</title>
      <p id="d2e11047">Bathymetrical bumps and lateral constrictions in a tidal channel in conjunction with tidal flow and longitudinal salinity gradients can lead to frontogenesis in estuaries <xref ref-type="bibr" rid="bib1.bibx45" id="paren.189"/> as well as increased mixing. The principle of this process is sketched in Fig. <xref ref-type="fig" rid="F15"/> for the example of an ebb current: Assuming an initially vertically well-mixed estuary with equally-spaced vertical isohaline surfaces, a sheared ebb current over a bathymetrical bump and a zone of weak recirculation downstream of the bump (Fig. <xref ref-type="fig" rid="F15"/>a), the isohalines will be strained differentially. Over flat bathymetry, the classical ebb straining described by <xref ref-type="bibr" rid="bib1.bibx147" id="text.190"/> will occur, leading to increased mixing (Sect. <xref ref-type="sec" rid="Ch1.S4.SS1.SSS1"/>, and left side of Fig. <xref ref-type="fig" rid="F15"/>b). On the lee side of the bump, where the ebb flow is partially blocked near the bed, the down-estuary advection of the isohalines is reduced or inverted while it is increased near the surface. This situation leads to a near-bottom retention of saline water on the lee side of the bump and thus to increased salt stratification. At the same time, the recirculation velocity near the bed and thus the vertical shear on the lee side of the bump will increase due to the backward slope of the strongly stratified isohalines. Increased shear, in turn, leads to increased turbulence production which in concert with strong stratification finally leads to strongly increased mixing. In their model simulations of the Hudson River estuary, <xref ref-type="bibr" rid="bib1.bibx45" id="text.191"/> show that the composite Froude number <xref ref-type="bibr" rid="bib1.bibx1" id="paren.192"/> in the frontal zone becomes supercritical in a similar way as was observed offshore of the lift-off point of a river plume at the mouth of an estuary <xref ref-type="bibr" rid="bib1.bibx63" id="paren.193"/>. Mixing hotspots related to bathymetric bumps in tidal channels are also visible in model simulations for the Hudson River estuary <xref ref-type="bibr" rid="bib1.bibx45 bib1.bibx168" id="paren.194"/>.</p>

      <fig id="F15" specific-use="star"><label>Figure 15</label><caption><p id="d2e11079"> Sketch explaining the effect of along-channel bathymetric bumps on increased mixing during ebb. <bold>(a)</bold> The vertical lines represent isohalines, with light grey shading indicating lower and dark grey shading indicating greater salinity. During this phase of early ebb, the salinity field is still assumed to be vertically well-mixed. The arrows represent horizontal flow velocity, showing some weak recirculation in lee of the bathymetric bump; <bold>(b)</bold> due to strong shear and blocking of the flow, the salinity field is most strongly strained in lee of the bump. The combination of strong shear-generated turbulence and strong salinity stratification then leads to a hotspot of vertical salt mixing. </p></caption>
            <graphic xlink:href="https://os.copernicus.org/articles/22/1875/2026/os-22-1875-2026-f15.png"/>

          </fig>

      <p id="d2e11094">A realistic example of frontal mixing comes from a numerical model representation of the partially mixed James River estuary (Fig. <xref ref-type="fig" rid="F16"/>). This estuary has two pronounced constrictions, one at km 18, and the other at the mouth at km 30.  The expansions on the seaward (right) side of these constrictions result in steep upward tilt of the isopycnals due to the supercritical hydraulic response to the expansions <xref ref-type="bibr" rid="bib1.bibx46" id="paren.195"/>. These steeply sloping isopcnals are associated with strong horizontal and vertical salinity gradients, i.e., frontal conditions. At the time of maximum ebb, mixing (as quantified by <inline-formula><mml:math id="M371" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>≈</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>) shows a pronounced maximum along each of the frontal zones. The energy for mixing along these frontal zones does not come from the bottom boundary layer, but rather from the baroclinic shear associated with the steeply sloping pycnocline. That strong shear also maintains the strong stratification via longitudinal straining of the horizontal salinity gradient. An observational example of the same phenomenon is discussed in Sect. <xref ref-type="sec" rid="Ch1.S5.SS1"/> and illustrated in Fig. <xref ref-type="fig" rid="F17"/>.</p>

      <fig id="F16" specific-use="star"><label>Figure 16</label><caption><p id="d2e11144">Realistic numerical simulation of conditions along the thalweg of the James River estuary during maximum ebb of spring tide, under moderate river discharge conditions, illustrating frontal zones with intensified mixing. The vertical component of the local mixing rate, <inline-formula><mml:math id="M372" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>≈</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>, is shown as colour scale. The along-estuary salinity distribution is indicated by black contours (contour interval 1 g kg<sup>−1</sup>). </p></caption>
            <graphic xlink:href="https://os.copernicus.org/articles/22/1875/2026/os-22-1875-2026-f16.png"/>

          </fig>

</sec>
</sec>
</sec>
<sec id="Ch1.S5">
  <label>5</label><title>Methods to quantify mixing</title>
<sec id="Ch1.S5.SS1">
  <label>5.1</label><title>Observational methods</title>
      <p id="d2e11218">Direct field measurements of the mixing of salt in estuaries is impractical, due to the microscopic scales at which the dissipation of salinity variance occurs, see Sect. <xref ref-type="sec" rid="Ch1.S2.SS1"/>. The turbulent motions that drive mixing can be resolved however, and numerous field investigations have quantified mixing based on measurements of turbulent motions at scales from metres to centimetres, then using theoretical arguments to relate the observable characteristics of the turbulence with either the mixing <inline-formula><mml:math id="M374" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> or the diahaline turbulent salt flux <inline-formula><mml:math id="M375" display="inline"><mml:mrow><mml:msub><mml:mi>j</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>. A common approach is to use the relationship between the eddy diffusion coefficient for mass <inline-formula><mml:math id="M376" display="inline"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and turbulent kinetic energy dissipation rate <inline-formula><mml:math id="M377" display="inline"><mml:mi mathvariant="italic">ε</mml:mi></mml:math></inline-formula>,

            <disp-formula id="Ch1.E38" content-type="numbered"><label>38</label><mml:math id="M378" display="block"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi mathvariant="normal">Rf</mml:mi><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="normal">Rf</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msup><mml:mi>N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mi mathvariant="italic">ε</mml:mi></mml:mfrac></mml:mstyle></mml:mrow></mml:math></disp-formula>

          as proposed by <xref ref-type="bibr" rid="bib1.bibx122" id="text.196"/>, where <inline-formula><mml:math id="M379" display="inline"><mml:mi mathvariant="normal">Rf</mml:mi></mml:math></inline-formula> is the flux Richardson number and <inline-formula><mml:math id="M380" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula> is the buoyancy frequency. With an estimate of <inline-formula><mml:math id="M381" display="inline"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and a local measure of the vertical salinity gradient <inline-formula><mml:math id="M382" display="inline"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:math></inline-formula>, the vertical turbulent salt flux <inline-formula><mml:math id="M383" display="inline"><mml:mrow><mml:msub><mml:mi>j</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> and the salinity variance dissipation <inline-formula><mml:math id="M384" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are readily estimated, see Eqs. (<xref ref-type="disp-formula" rid="Ch1.E10"/>) and (<xref ref-type="disp-formula" rid="Ch1.E26"/>). <xref ref-type="bibr" rid="bib1.bibx126 bib1.bibx127" id="text.197"/> pioneered the use of a free-falling shear probe in an estuary for the purpose of quantifying mixing; since then this method has been followed in a variety of estuarine settings <xref ref-type="bibr" rid="bib1.bibx137 bib1.bibx3 bib1.bibx139 bib1.bibx66 bib1.bibx136" id="paren.198"/>.  This method is challenging for measuring turbulence near the bottom, due to the risk of smashing the delicate shear probe into the bottom.  An alternative method is the estimation of the dissipation rate <inline-formula><mml:math id="M385" display="inline"><mml:mi mathvariant="italic">ε</mml:mi></mml:math></inline-formula> based on the inertial-subrange velocity spectrum measured by a turbulence-resolving current meter <xref ref-type="bibr" rid="bib1.bibx156 bib1.bibx50" id="paren.199"/>. A related methodology pioneered by <xref ref-type="bibr" rid="bib1.bibx39" id="text.200"/>, and applied by <xref ref-type="bibr" rid="bib1.bibx152" id="text.201"/>, <xref ref-type="bibr" rid="bib1.bibx100" id="text.202"/> and <xref ref-type="bibr" rid="bib1.bibx50" id="text.203"/> among others is to use an Acoustic Doppler Current Profiler (ADCP) to obtain a direct measurement of the Reynolds stress <inline-formula><mml:math id="M386" display="inline"><mml:mrow><mml:mo>[</mml:mo><mml:mover accent="true"><mml:mi>u</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mover accent="true"><mml:mi>w</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>, then in combination with a measure of the vertical shear to estimate eddy viscosity <inline-formula><mml:math id="M387" display="inline"><mml:mrow><mml:msub><mml:mi>A</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, and then to infer the eddy diffusivity <inline-formula><mml:math id="M388" display="inline"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and the mixing rate <inline-formula><mml:math id="M389" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>.</p>
      <p id="d2e11462">These methods are most effective in weak stratification conditions, when dissipation rates tend to be high and the turbulent length scale is readily resolved by the sensor. As stratification gets stronger, however, the scales of turbulent motions decrease, as scaled by the Ozmidov scale

            <disp-formula id="Ch1.E39" content-type="numbered"><label>39</label><mml:math id="M390" display="block"><mml:mrow><mml:msub><mml:mi>L</mml:mi><mml:mi mathvariant="normal">O</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi mathvariant="italic">ε</mml:mi><mml:mrow><mml:msup><mml:mi>N</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></disp-formula>

          making it harder to obtain a reliable estimate of <inline-formula><mml:math id="M391" display="inline"><mml:mi mathvariant="italic">ε</mml:mi></mml:math></inline-formula>. More problematical is that the estimation of mixing <inline-formula><mml:math id="M392" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> depends on the square of the local salinity gradient, see Eq. (<xref ref-type="disp-formula" rid="Ch1.E9"/>), which itself is a challenging quantity to measure at the small vertical scales relevant to turbulence within a stratified environment.</p>
      <p id="d2e11517">Micro-conductivity sensors provide a means of resolving the salinity gradient and associated overturns at scales relevant to the characterization of turbulent motions <xref ref-type="bibr" rid="bib1.bibx127" id="paren.204"/>. The Thorpe overturn scale <inline-formula><mml:math id="M393" display="inline"><mml:mrow><mml:msub><mml:mi>L</mml:mi><mml:mi mathvariant="normal">T</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx155" id="paren.205"/> provides an alternative means of estimating the turbulent dissipation rate:

            <disp-formula id="Ch1.E40" content-type="numbered"><label>40</label><mml:math id="M394" display="block"><mml:mrow><mml:mi mathvariant="italic">ε</mml:mi><mml:mo>≈</mml:mo><mml:msubsup><mml:mi>L</mml:mi><mml:mi mathvariant="normal">T</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:msup><mml:mi>N</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msup><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          as shown by <xref ref-type="bibr" rid="bib1.bibx125" id="text.206"/> in his turbulence measurements in the Hudson River estuary. It is particularly useful in the stratified interior, where the small vertical scales of turbulence make other methods of estimating <inline-formula><mml:math id="M395" display="inline"><mml:mi mathvariant="italic">ε</mml:mi></mml:math></inline-formula> more difficult <xref ref-type="bibr" rid="bib1.bibx34 bib1.bibx110" id="paren.207"/>.</p>
      <p id="d2e11575">All of the above methods depend on a turbulence closure assumption as well as an estimate of mixing efficiency to link the dissipation rate <inline-formula><mml:math id="M396" display="inline"><mml:mi mathvariant="italic">ε</mml:mi></mml:math></inline-formula> to the actual mixing of salt, <inline-formula><mml:math id="M397" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>.  The use of micro-conductivity sensors offers a more direct approach to estimating the mixing of salt. Following <xref ref-type="bibr" rid="bib1.bibx61" id="text.208"/>, high-frequency micro-conductivity time series measurements can resolve the inertial subrange and the viscous-convective subrange of the salinity variance spectrum

            <disp-formula id="Ch1.E41" content-type="numbered"><label>41</label><mml:math id="M398" display="block"><mml:mrow><mml:msub><mml:mi>S</mml:mi><mml:mi mathvariant="normal">ss</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>k</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:msub><mml:mi>b</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:msup><mml:mi mathvariant="italic">ε</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:msup><mml:mi mathvariant="script">K</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo movablelimits="false">min⁡</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="script">K</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="script">K</mml:mi><mml:mi mathvariant="italic">η</mml:mi></mml:msub><mml:msup><mml:mo>)</mml:mo><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          where <inline-formula><mml:math id="M399" display="inline"><mml:mrow><mml:msub><mml:mi>S</mml:mi><mml:mi mathvariant="normal">ss</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the power spectral density of salinity variance, <inline-formula><mml:math id="M400" display="inline"><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.4</mml:mn></mml:mrow></mml:math></inline-formula> is the Kolmogorov constant for scalar variance, <inline-formula><mml:math id="M401" display="inline"><mml:mi mathvariant="script">K</mml:mi></mml:math></inline-formula> is the wave number and <inline-formula><mml:math id="M402" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="script">K</mml:mi><mml:mi mathvariant="italic">η</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.04</mml:mn><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ε</mml:mi><mml:mo>/</mml:mo><mml:msup><mml:mi mathvariant="italic">ν</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msup><mml:msup><mml:mo>)</mml:mo><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> is the Kolmogorov wave number, with the molecular viscosity <inline-formula><mml:math id="M403" display="inline"><mml:mi mathvariant="italic">ν</mml:mi></mml:math></inline-formula>. Note that the last term in Eq. (<xref ref-type="disp-formula" rid="Ch1.E41"/>) resolves the transition from the inertial subrange to the viscous-convective subrange at length-scales of <inline-formula><mml:math id="M404" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="script">K</mml:mi><mml:mi mathvariant="italic">η</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msubsup></mml:mrow></mml:math></inline-formula>.  As long as the height of the spectrum within either the inertial or viscous-convective subrange can be estimated, Eq. (<xref ref-type="disp-formula" rid="Ch1.E41"/>) can be used in combination with an estimate of <inline-formula><mml:math id="M405" display="inline"><mml:mi mathvariant="italic">ε</mml:mi></mml:math></inline-formula> to estimate mixing, i.e., the dissipation of salinity variance <inline-formula><mml:math id="M406" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, without relying on turbulence closure assumptions.  Moreover, the formula depends only weakly on the estimate of <inline-formula><mml:math id="M407" display="inline"><mml:mi mathvariant="italic">ε</mml:mi></mml:math></inline-formula>, which is often hard to estimate accurately in the stratified turbulent regime.  <xref ref-type="bibr" rid="bib1.bibx61" id="text.209"/> used this method to estimate mixing rates in the highly stratified Connecticut River estuary. Their analysis demonstrated peak values of <inline-formula><mml:math id="M408" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> in the pycnocline in association with intense shear instability during ebb tide (Fig. <xref ref-type="fig" rid="F17"/>).</p>

      <fig id="F17" specific-use="star"><label>Figure 17</label><caption><p id="d2e11819">Spatial distribution of <inline-formula><mml:math id="M409" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (coloured dots) in the stratified shear layer of the early ebb in the Connecticut River estuary, estimated from combined observations by a string of Acoustic Doppler Velocimetres (ADVs) and microconductivity probes. The crosses are locations where values of <inline-formula><mml:math id="M410" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> could not be reliably estimated. The grey scales in the background indicate the intensity of acoustic backscatter. This figure has been taken from <xref ref-type="bibr" rid="bib1.bibx61" id="text.210"/>. </p></caption>
          <graphic xlink:href="https://os.copernicus.org/articles/22/1875/2026/os-22-1875-2026-f17.png"/>

        </fig>

      <p id="d2e11853">Acoustic backscatter also provides a more direct means of estimating mixing, as demonstrated by <xref ref-type="bibr" rid="bib1.bibx84" id="text.211"/>. Using a broadband array of echo sounders, <xref ref-type="bibr" rid="bib1.bibx84" id="text.212"/> demonstrated that the observed scattering in the pycnocline of the Connecticut River estuary has a spectral slope consistent with the viscous-convective subrange. Other scatterers, such as fish, bubbles and sediment, have distinctly different spectral slopes. If the stratification is strong enough and other scatterers do not overwhelm the signal, the acoustic backscatter intensity can be used as a nearly direct measure of <inline-formula><mml:math id="M411" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>.  While the signal-to-noise ratio of the acoustic amplitude does not offer the same precision as microstructure measurements, it produces remarkable spatial resolution, as demonstrated by acoustic measurements within a train of Kelvin-Helmholz instabililities in the Connecticut River estuary (Fig. <xref ref-type="fig" rid="F18"/>). Based on the evidence provided by the analysis of <xref ref-type="bibr" rid="bib1.bibx84" id="text.213"/>, echo-sounding imagery can be used to identify regions of intense mixing, even if the actual magnitude of <inline-formula><mml:math id="M412" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> cannot be quantified.</p>

      <fig id="F18"><label>Figure 18</label><caption><p id="d2e11892">Kelvin-Helmholtz instabilities in the Connecticut River estuary. The colour shading shows the decadal logarithm of the salinity mixing <inline-formula><mml:math id="M413" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, estimated from acoustic backscatter measurements. This figure has been taken from <xref ref-type="bibr" rid="bib1.bibx84" id="text.214"/>. </p></caption>
          <graphic xlink:href="https://os.copernicus.org/articles/22/1875/2026/os-22-1875-2026-f18.png"/>

        </fig>

</sec>
<sec id="Ch1.S5.SS2">
  <label>5.2</label><title>Numerical modelling techniques</title>
      <p id="d2e11923">Since direct observations of turbulent properties in estuaries are very tedious and noisy (see the discussion in Sect. <xref ref-type="sec" rid="Ch1.S2.SS1"/>), the analysis of mixing in estuaries largely relies on numerical models. The advantage of numerical models is certainly their coverage of the entire four-dimensional estuarine space (three spatial directions and time), whereas observations can only sparsely cover this space. However, to ensure that the numerical model results sufficiently represent real estuaries, several measures need to be taken: besides realistic input data into the model (such as bathymetry, open boundary conditions, meteorological forcing) and a thorough validation using observational data, the numerical model itself must be physically sound and numerically accurate. There is an extensive body of literature addressing these two topics <xref ref-type="bibr" rid="bib1.bibx53 bib1.bibx159 bib1.bibx146 bib1.bibx175 bib1.bibx78" id="paren.215"/>. Here, we will present in more detail two aspects which are key to the proper assessment of mixing in estuaries: turbulence closure modelling (Sect. <xref ref-type="sec" rid="Ch1.S5.SS2.SSS1"/>) and numerical mixing analysis (Sect. <xref ref-type="sec" rid="Ch1.S5.SS2.SSS2"/>).</p>
<sec id="Ch1.S5.SS2.SSS1">
  <label>5.2.1</label><title>Turbulence closure modelling</title>
      <p id="d2e11942">The starting point of turbulence closures are the fundamental laws of momentum, mass and energy conservation from which transport equations based on molecular viscosities and diffusivities can be derived, see e.g. the molecular salinity equation Eq. (<xref ref-type="disp-formula" rid="Ch1.E2"/>). Applying the Reynolds decomposition <xref ref-type="bibr" rid="bib1.bibx88" id="paren.216"><named-content content-type="pre">see</named-content><named-content content-type="post">and the discussion in Sect. <xref ref-type="sec" rid="Ch1.S2.SS1"/></named-content></xref> leads to transport equations for Reynolds-averaged variables, see e.g. the salinity equation Eq. (<xref ref-type="disp-formula" rid="Ch1.E4"/>), which include unknown second moments such as the vertical turbulent salt flux <inline-formula><mml:math id="M414" display="inline"><mml:mrow><mml:mo>[</mml:mo><mml:mover accent="true"><mml:mi>w</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>. In a similar manner, exact transport equations can be derived for those second moments, which however would include unknown third moments, and so forth. This infinite series of unclosed higher and higher order equations establishes the turbulence closure problem. An example for a second-moment transport equation (<inline-formula><mml:math id="M415" display="inline"><mml:mrow><mml:mo>[</mml:mo><mml:msup><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> in this case) is Eq. (<xref ref-type="disp-formula" rid="Ch1.E5"/>) which includes among others the vertical turbulent transport of the micro-structure salinity variance <inline-formula><mml:math id="M416" display="inline"><mml:mrow><mml:mo>[</mml:mo><mml:mover accent="true"><mml:mi>w</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:msup><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> as a third moment. Second-moment closures use parameterisations for all unknown third moments, such that the system of second-moment transport equations is closed. To substantially simplify the solution, equilibrium assumptions are made for most second moments in such a way that the sum of the transport divergence and the time change are set to zero. For the example of the micro-structure variance equation Eq. (<xref ref-type="disp-formula" rid="Ch1.E5"/>), this leads to the equality of stirring and mixing (<inline-formula><mml:math id="M417" display="inline"><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>), see also the discussion in Sect. <xref ref-type="sec" rid="Ch1.S2.SS1"/>.</p>
      <p id="d2e12043">A central element of turbulence closures is the eddy diffusivity assumption Eq. (<xref ref-type="disp-formula" rid="Ch1.E7"/>), relating turbulent tracer fluxes to Reynolds-averaged tracer gradients, with the eddy diffusivity as a factor of proportionality, leading to the principle of down-gradient turbulent tracer fluxes. Similar assumptions are made for momentum and turbulent quantities. The eddy diffusivities include the entire second-moment closure. For the key quantity of the turbulent kinetic energy (<inline-formula><mml:math id="M418" display="inline"><mml:mrow><mml:mi>k</mml:mi><mml:mo>=</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mo>[</mml:mo><mml:msubsup><mml:mover accent="true"><mml:mi>u</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mi>j</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>), a budget equation is generally solved with shear production as source term and dissipation of TKE into heat as sink term. For stable stratification, turbulence leads to mixing as well as negative buoyancy production, which leads to an increase of local potential energy and acts as a further TKE sink term. For estuarine numerical modelling, the use of so-called two-equation turbulence closure models has become a good compromise between efficiency and accuracy <xref ref-type="bibr" rid="bib1.bibx166" id="paren.217"/>. In such models, the first equation generally is the budget-equation for the TKE, while the second equation is related to the length scale of turbulence, such as the dissipation rate of TKE, <inline-formula><mml:math id="M419" display="inline"><mml:mi mathvariant="italic">ε</mml:mi></mml:math></inline-formula> (the <inline-formula><mml:math id="M420" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula>-<inline-formula><mml:math id="M421" display="inline"><mml:mi mathvariant="italic">ε</mml:mi></mml:math></inline-formula> model), or the turbulence frequency, <inline-formula><mml:math id="M422" display="inline"><mml:mrow><mml:mi mathvariant="italic">ω</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="italic">ε</mml:mi><mml:mo>/</mml:mo><mml:mi>k</mml:mi></mml:mrow></mml:math></inline-formula> (the <inline-formula><mml:math id="M423" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula>-<inline-formula><mml:math id="M424" display="inline"><mml:mi mathvariant="italic">ω</mml:mi></mml:math></inline-formula> model). If properly calibrated, these different versions of length-scale related equations perform similarly <xref ref-type="bibr" rid="bib1.bibx167" id="paren.218"/>. The most important aspect of the calibration is to ensure the quantitatively correct damping of vertical turbulent mixing caused by stable stratification. The principles of this calibration process are explained in   Appendix <xref ref-type="sec" rid="App1.Ch1.S5"/>. In essence, the steady-state gradient Richardson number is set to the value of <inline-formula><mml:math id="M425" display="inline"><mml:mrow><mml:mi>R</mml:mi><mml:msub><mml:mi>i</mml:mi><mml:mi mathvariant="normal">st</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.25</mml:mn></mml:mrow></mml:math></inline-formula> such that for stronger stratification (<inline-formula><mml:math id="M426" display="inline"><mml:mrow><mml:mi>R</mml:mi><mml:mi>i</mml:mi><mml:mo>&gt;</mml:mo><mml:mi>R</mml:mi><mml:msub><mml:mi>i</mml:mi><mml:mi mathvariant="normal">st</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>), turbulence is suppressed and for weaker stratification it is enhanced. A properly calibrated turbulence closure model does also reproduce the canonical values of mixing efficiency <inline-formula><mml:math id="M427" display="inline"><mml:mrow><mml:mi mathvariant="normal">Γ</mml:mi><mml:mo>≈</mml:mo><mml:mn mathvariant="normal">0.2</mml:mn></mml:mrow></mml:math></inline-formula>  and the steady-state flux Richardson number <inline-formula><mml:math id="M428" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Rf</mml:mi><mml:mi mathvariant="normal">st</mml:mi></mml:msub><mml:mo>≈</mml:mo><mml:mn mathvariant="normal">0.15</mml:mn></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx122" id="paren.219"/>. It should be noted that these values would only be reached in numerical models for so-called stationary homogeneous shear layers where production and destruction of TKE are balanced. In cases of strong temporal variability or locations with a substantial vertical turbulent transport of TKE (such as in active entrainment layers), significant deviations can occur <xref ref-type="bibr" rid="bib1.bibx61" id="paren.220"><named-content content-type="pre">see the discussion by</named-content></xref>.</p>
</sec>
<sec id="Ch1.S5.SS2.SSS2">
  <label>5.2.2</label><title>Numerical mixing analysis</title>
      <p id="d2e12218">Although the numerical mixing in the model of the Elbe River estuary is relatively small (see Figs. <xref ref-type="fig" rid="F4"/> and <xref ref-type="fig" rid="F8"/>), it can be of considerable size in other estuarine models <xref ref-type="bibr" rid="bib1.bibx132 bib1.bibx57" id="paren.221"/>. Therefore, the quantification of numerical mixing is discussed here. As demonstrated in the previous sections, the comparison of analytically derived mixing relations with diagnosed mixing from numerical simulations requires the quantification of the total variance decay experienced by a tracer in the numerical model. This does not only consist of contributions from the parameterised turbulence closure (physical mixing), but also from the discretisation of the tracer advection operator <xref ref-type="bibr" rid="bib1.bibx54" id="paren.222"><named-content content-type="pre">spurious numerical mixing;</named-content></xref>. It is assumed that the tracer advection discretisation is conservative, monotone (in the sense that it does not generate wiggles and new tracer maxima and minima) and weakly diffusive. Many advection schemes with these properties have been developed such as the FCT (Flux-Corrected Transport) schemes <xref ref-type="bibr" rid="bib1.bibx174" id="paren.223"/>, TVD (Total Variation Diminishing) schemes <xref ref-type="bibr" rid="bib1.bibx128" id="paren.224"/> and the MPDATA (Multidimensional Positive Definite Advection Transport Algorithm) schemes <xref ref-type="bibr" rid="bib1.bibx150" id="paren.225"/>. They all use some degree of implicit diffusion to ensure monotonicity.</p>
      <p id="d2e12243">In many model applications, numerical mixing has been found to explain a large portion of the total (physical plus numerical) mixing. High values of numerical mixing of typically 50 % have been found for the Baltic Sea <xref ref-type="bibr" rid="bib1.bibx60" id="paren.226"/> and the Puget Sound <xref ref-type="bibr" rid="bib1.bibx8" id="paren.227"/>, while <xref ref-type="bibr" rid="bib1.bibx93" id="text.228"/> report about 33 % of numerical mixing for their simulation of the Changjiang River estuary. Low numerical mixing has been seen for simulations with high explicit horizontal diffusivity <xref ref-type="bibr" rid="bib1.bibx135" id="paren.229"><named-content content-type="post">for the Elbe River estuary</named-content></xref> or for idealised estuarine models <xref ref-type="bibr" rid="bib1.bibx109" id="paren.230"/>. To account for the role of numerical mixing and to evaluate measures for its reduction, numerical mixing analysis methods have been developed <xref ref-type="bibr" rid="bib1.bibx13 bib1.bibx77 bib1.bibx141 bib1.bibx2" id="paren.231"/>. Here, we first briefly describe general methods to quantify physical and numerical mixing in ocean models, before we give recommendations on how to reduce numerical mixing (see below).</p>
</sec>
<sec id="Ch1.S5.SS2.SSSx1" specific-use="unnumbered">
  <title>Methods to quantify numerical mixing</title>
      <p id="d2e12273">To demonstrate methods to discriminate between physical and numerical mixing and to accurately quantify their sum, we give a detailed one-dimensional example of an advection-diffusion equation in Appendix <xref ref-type="sec" rid="App1.Ch1.S6"/>, including its discretisation (Appendix <xref ref-type="sec" rid="App1.Ch1.S6.SS1"/>), the derivation of the mixing analysis (Appendix <xref ref-type="sec" rid="App1.Ch1.S6.SS2"/>), a stationary solution of the one-dimensional advection-diffusion equation (Appendix <xref ref-type="sec" rid="App1.Ch1.S6.SS3"/>) and the derivation of its analytical solution (Appendix <xref ref-type="sec" rid="App1.Ch1.S6.SS4"/>). For this analysis, a first-order upstream (FOU) method is used as an example because it allows for an explicit discretisation of the physical and numerical mixing. Since the FOU scheme for advection shown in Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E61"/>) is inherently diffusive, it is generally not used in ocean models. Instead, mostly non-linear schemes are used for which the spurious numerical variance decay cannot be analytically derived. To separate between physical and numerical mixing, it is convenient to carry out the advection and diffusion discretisation in different steps, as an operational-split method. After the advection step, the numerical mixing is diagnosed, and after the diffusion step, the physical mixing is calculated. It is also possible to further separate the numerical and physical mixing into horizontal and vertical contributions. Different methods of numerical mixing quantification have been proposed for the pure advection step. Since the advection equation for the squared tracer, Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E60"/>) for <inline-formula><mml:math id="M429" display="inline"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>, is equivalent to the advection equation for the tracer itself, Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E59"/>) for <inline-formula><mml:math id="M430" display="inline"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>, <xref ref-type="bibr" rid="bib1.bibx13" id="text.232"/> proposed to additionally carry out an advection step for the squared tracer (which should conserve the squared tracer) and to subtract from it the square of the advected tracer, Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E59"/>), which reduces the squared tracer. This difference should be a good estimate for the variance reduction in a particular grid point during a particular time step. Division by the time step <inline-formula><mml:math id="M431" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:math></inline-formula> should give the local numerical variance decay (or mixing). As an alternative, <xref ref-type="bibr" rid="bib1.bibx77" id="text.233"/> proposed to calculate the left-hand side (time derivative and advection term) of the diagnostic tracer-square advection equation as an estimate for the right-hand side (which should be the numerical mixing). Yet another method has recently been proposed by <xref ref-type="bibr" rid="bib1.bibx2" id="text.234"/>. All three methods are equivalent when integrated over a larger area, and differences do only show up in the local distribution of the numerical mixing. An accurate numerical mixing quantification requires the direct implementation of the analysis into the numerical model code, since analysing numerical mixing from model output even at high output frequency has proven quite inaccurate <xref ref-type="bibr" rid="bib1.bibx141" id="paren.235"/>.</p>
      <p id="d2e12348">There are alternative diagnostic methods to quantify numerical mixing, however not in terms of variance decay <xref ref-type="bibr" rid="bib1.bibx49 bib1.bibx62 bib1.bibx33" id="paren.236"/>.</p>
</sec>
<sec id="Ch1.S5.SS2.SSSx2" specific-use="unnumbered">
  <title>Measures to reduce numerical mixing</title>
      <p id="d2e12361">Generally, a finer resolution should lead to a reduction of numerical mixing. However, <xref ref-type="bibr" rid="bib1.bibx13" id="text.237"/> showed that this might not be very efficient, since for an idealised example a grid-refinement by a factor of nine in the horizontal direction and by a factor of four in vertical direction (equivalent to a 144-fold increase in computational resources) led to a reduction of numerical mixing by less than a factor of two. More promising is the better alignment of grid layers with isopycnals, or adding a Lagrangean type of vertical grid motion, to reduce vertical advection with respect to moving coordinate layers. Specifically, vertically adaptive coordinates proved to significantly reduce numerical mixing <xref ref-type="bibr" rid="bib1.bibx60 bib1.bibx51" id="paren.238"/>. A further reduction of numerical mixing can be achieved by aligning the horizontal grid with the major tidal flow directions. The present Elbe River estuary model <xref ref-type="bibr" rid="bib1.bibx136" id="paren.239"><named-content content-type="pre">adopted from</named-content></xref> as well as the Weser River estuary model by <xref ref-type="bibr" rid="bib1.bibx140" id="text.240"/> align the curvilinear grid with the dredged navigational channel and not, as typically done, with the lateral shoreline. This reduces numerical mixing because in estuaries lateral salinity gradients are generally much larger than longitudinal ones, such that these specially constructed horizontal coordinates align with those gradients which then do not have to be advected with the along-estuary flow across grid interfaces.</p>
      <p id="d2e12378">Numerical mixing is a fact in all numerical model applications and cannot be avoided. It is therefore essential to quantify its contribution to the tracer distribution, which is the result of the sum of intended physical and unintended numerical mixing. Intentionally reducing physical mixing would be one way to obtain realistic total mixing. This has been impressively demonstrated by <xref ref-type="bibr" rid="bib1.bibx132" id="text.241"/> who in a model application to the Connecticut River estuary reduced the physical mixing by reducing the steady-state Richardson number <inline-formula><mml:math id="M432" display="inline"><mml:mrow><mml:mi>R</mml:mi><mml:msub><mml:mi>i</mml:mi><mml:mi mathvariant="normal">st</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> from the canonical value of 0.25 (see Sect. <xref ref-type="sec" rid="Ch1.S5.SS2.SSS1"/>) to a very low value of 0.1. By doing so, they increased the numerical mixing from 50 % to 66 %, but reduced the total mixing such that the resulting salinity structure was more realistic. Such measures should however be handled with care since the numerical mixing generally has a different spatial and temporal distribution than the physical mixing <xref ref-type="bibr" rid="bib1.bibx77 bib1.bibx57" id="paren.242"/>.</p>
</sec>
</sec>
</sec>
<sec id="Ch1.S6" sec-type="conclusions">
  <label>6</label><title>Future Perspectives</title>
      <p id="d2e12412">As reviewed in this paper, the work of past decades nowadays provides a consistent theoretical framework for estuarine mixing, the foundations of which have been laid in the early work by <xref ref-type="bibr" rid="bib1.bibx80" id="text.243"/> and <xref ref-type="bibr" rid="bib1.bibx161" id="text.244"/>. Although their work did not explicitly define and quantify mixing, mixing theories are conveniently founded on their frameworks. In agreement with turbulence theory <xref ref-type="bibr" rid="bib1.bibx123 bib1.bibx112" id="paren.245"/>, local mixing of a certain tracer is defined as the dissipation rate of the local variance of this tracer, <inline-formula><mml:math id="M433" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, see  Eqs. (<xref ref-type="disp-formula" rid="Ch1.E9"/>) and (<xref ref-type="disp-formula" rid="App1.Ch1.S2.E47"/>) and <xref ref-type="bibr" rid="bib1.bibx13" id="text.246"/>. Estuarine mixing <inline-formula><mml:math id="M434" display="inline"><mml:mi mathvariant="double-struck">M</mml:mi></mml:math></inline-formula> itself is then the integral of <inline-formula><mml:math id="M435" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> over estuarine volumes averaged over a certain period of time (e.g., the spring-neap cycle). Relating these definitions to bulk forcing parameters for the estuaries leads to the <italic>Knudsen mixing law</italic> Eq. (<xref ref-type="disp-formula" rid="Ch1.E21"/>) when the estuary is bounded by a fixed transect <xref ref-type="bibr" rid="bib1.bibx109" id="paren.247"/> or to the <italic> universal law of estuarine mixing</italic> Eq. (<xref ref-type="disp-formula" rid="Ch1.E32"/>) when the estuary is bounded by a moving isohaline <xref ref-type="bibr" rid="bib1.bibx9" id="paren.248"/>. Therefore, to understand the estuarine mixing <inline-formula><mml:math id="M436" display="inline"><mml:mi mathvariant="double-struck">M</mml:mi></mml:math></inline-formula>, its temporal and spatial composition by means of the local variance decay <inline-formula><mml:math id="M437" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> has to be studied. In a few cases, this was achieved through observations <xref ref-type="bibr" rid="bib1.bibx84 bib1.bibx61" id="paren.249"><named-content content-type="pre">e.g.,</named-content></xref>, but is more typically done with realistic numerical models of estuaries <xref ref-type="bibr" rid="bib1.bibx168 bib1.bibx135" id="paren.250"><named-content content-type="pre">e.g.,</named-content></xref>. These models are consistent with the mixing theories only if numerical mixing due to the discretisation of the tracer advection terms is included <xref ref-type="bibr" rid="bib1.bibx94" id="paren.251"><named-content content-type="pre">e.g.,</named-content></xref>. Using these observations and modelling techniques, the major mixing processes in some example estuaries are now understood, see e.g. <xref ref-type="bibr" rid="bib1.bibx168" id="text.252"/> for the Hudson River estuary, <xref ref-type="bibr" rid="bib1.bibx8" id="text.253"/> for the Salish Sea, <xref ref-type="bibr" rid="bib1.bibx57" id="text.254"/> for the Baltic Sea and <xref ref-type="bibr" rid="bib1.bibx136" id="text.255"/> for the Elbe River estuary.</p>
      <p id="d2e12525">Due to its high relevance for the understanding of estuarine dynamics and its socio-economical and ecological consequences, the research on estuarine mixing will continue. More studies for other estuaries will certainly come, most probably resulting in a different weighting of the most relevant mixing processes, maybe even describing new processes. But apart from that, the future of estuarine mixing research will likely be dominated by the technological progress that allows for ever finer-resolved, more efficient numerical modelling down to smaller and smaller scales. Here, we discuss in detail where, and to which extent, we see potential for such progress.</p>
<sec id="Ch1.S6.SS1">
  <label>6.1</label><title>Increased computational resources</title>
      <p id="d2e12535">It is expected that the trend of ever-increasing computational resources will continue. As an important development, the ongoing replacement of the more traditional Central Processing Units (CPUs) by modern Graphics Processing Units (GPUs) will improve the overall computational efficiency. As computational codes for coastal ocean models will become available for GPUs, this increase in computational power can be used for finer resolution models, longer simulation periods or larger model domains. Finer resolution models would be able to resolve further processes of estuarine mixing with more accuracy, such as smaller-scale topographic effects. Specifically, consequences of coastal engineering such as dredging and dam-building, which are commonly under-resolved in contemporary numerical simulations, could be reproduced more realistically. Today, multi-decadal simulations of well-resolved estuaries are hardly feasible. Such longer simulation periods could, however, be used to better reproduce interannual variability and consequences of long-term trends such as sea-level rise and changes in precipitation and evaporation patterns. Larger model domains could help to include more of the tidal or non-tidal parts of rivers or larger portions of the adjacent ocean including the river plume. It has been shown that the universal law of estuarine mixing Eq. (<xref ref-type="disp-formula" rid="Ch1.E33"/>) is only valid for isohaline surfaces that do not leave the model domain. On the other hand, isohaline theory does not distinguish between estuarine and river plume mixing, and often the transition between the two cannot be seen from model topography and coastlines. Therefore, it is desirable to simulate the entire river-estuary-plume region within a single model setup. Similarly, the confluence of multiple estuaries and river plumes could be simulated at fine resolution when computational resources further improve. </p>
</sec>
<sec id="Ch1.S6.SS2">
  <label>6.2</label><title>Large Eddy Simulation modelling</title>
      <p id="d2e12549">More powerful computer resources could also allow for models with improved model physics, such as using higher-order turbulence parameterisations or the application of Large-Eddy Simulation (LES) models. Both improvements would have a direct effect on the computation of mixing. One example for higher-order turbulence closure models could be the use of non-local models that do not enforce the down-gradient assumption of turbulent fluxes <xref ref-type="bibr" rid="bib1.bibx85" id="paren.256"><named-content content-type="pre">see the recent study by</named-content></xref>. Furthermore, parameterisations of Langmuir Turbulence which potentially affects estuarine mixing in the presence of wind waves could be added <xref ref-type="bibr" rid="bib1.bibx56" id="paren.257"/>. The application of LES models to estuaries would mean that the most energetic turbulent eddies could be resolved instead of being parameterised by turbulence closure models. Then, only the small-scale mixing would need to be parameterised, for which generally relatively simple closures should be sufficient. A further advantage of LES models over classical coastal ocean models is their non-hydrostatic pressure calculation which would allow for the reproduction of non-hydrostatic effects such as internal lee wave generation <xref ref-type="bibr" rid="bib1.bibx148" id="paren.258"/>, generation of interfacial waves at pycnoclines when the surface and the bottom boundary layers interact <xref ref-type="bibr" rid="bib1.bibx171" id="paren.259"/> or Langmuir Circulation effects in shallow coastal waters <xref ref-type="bibr" rid="bib1.bibx165" id="paren.260"/>. Two specific LES model applications have been reported by <xref ref-type="bibr" rid="bib1.bibx90" id="text.261"/> and <xref ref-type="bibr" rid="bib1.bibx91" id="text.262"/> who calculated a tidal water-column setup with periodic boundary conditions in both horizontal directions. So far, no further estuarine LES applications have been published. Specifically efficient LES model codes such as Oceananigans <xref ref-type="bibr" rid="bib1.bibx133" id="paren.263"/> that can be executed on GPUs open vast possibilities of coastal <xref ref-type="bibr" rid="bib1.bibx64" id="paren.264"><named-content content-type="pre">see the recent study by </named-content></xref> and estuarine LES applications in the future, starting with idealised setups, but also with the future potential to simulate estuarine dynamics over more realistic topographies. </p>
</sec>
<sec id="Ch1.S6.SS3">
  <label>6.3</label><title>Water Mass Transformation theory</title>
      <p id="d2e12594">The concept of Water Mass Transformation (WMT) has been strongly extended in recent years <xref ref-type="bibr" rid="bib1.bibx59 bib1.bibx55" id="paren.265"><named-content content-type="pre">see, e.g.,</named-content></xref>. Such multi-dimensional WMT concepts using other constituents in addition to salinity, such as temperature or biogeochemical tracer concentrations, are typically applied to large-scale ocean problems. Estuarine applications have yet to be created, but could give insight where, for example, temperature plays an important role in addition to salinity, such as shown for the Arctic Ocean <xref ref-type="bibr" rid="bib1.bibx124" id="paren.266"/>, the Persian Gulf <xref ref-type="bibr" rid="bib1.bibx98" id="paren.267"/> or the Baltic Sea <xref ref-type="bibr" rid="bib1.bibx57" id="paren.268"/>.</p>
</sec>
<sec id="Ch1.S6.SS4">
  <label>6.4</label><title>Machine Learning</title>
      <p id="d2e12619">Finally, applications of Machine Learning (ML) have entered all fields of oceanography, including coastal and estuarine research. Typical estuarine applications would comprise the calculation of river discharge from meteorological data <xref ref-type="bibr" rid="bib1.bibx6" id="paren.269"/> or the estimation of the salt intrusion length inside estuaries <xref ref-type="bibr" rid="bib1.bibx140" id="paren.270"/>. It is not yet obvious in which way fast, efficient and well-trained ML algorithms could be exploited to support research on estuarine mixing, but it can certainly be expected that ML applications will soon extend our toolkit in addition to numerical modelling and observational methods.</p>
</sec>
</sec>

      
      </body>
    <back><app-group>

<app id="App1.Ch1.S1">
  <label>Appendix A</label><title>Stirring and mixing: the case of saltwater in a glass beaker</title>
      <p id="d2e12641">The effects of stirring and mixing in a fluid subject to molecular diffusion are explained here quantitatively by means of a simple analytical example. We assume a fluid in a glass beaker of 0.1 m depth and a cross-sectional area of 0.01 m<sup>2</sup>, thus containing 1 L of fluid. Imagine our beaker initially contains salty water underlaying freshwater with a smooth transition in between, with a horizontally homogeneous distribution such that they only depend on the vertical coordinate <inline-formula><mml:math id="M439" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> and time <inline-formula><mml:math id="M440" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula>. The vertical diffusive spreading of the salinity <inline-formula><mml:math id="M441" display="inline"><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">ˇ</mml:mo></mml:mover></mml:math></inline-formula> in our beaker would then be described by the classical one-dimensional diffusion equation of the form

          <disp-formula id="App1.Ch1.S1.E42" content-type="numbered"><label>A1</label><mml:math id="M442" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">ˇ</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mi mathvariant="italic">κ</mml:mi><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msup><mml:mo>∂</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">ˇ</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msup><mml:mi>z</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></disp-formula>

        with <inline-formula><mml:math id="M443" display="inline"><mml:mrow><mml:mi mathvariant="italic">κ</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">9</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> m<sup>2</sup> s<sup>−1</sup> denoting the molecular diffusivity of salt. Let us assume an initial salinity distribution of the form

          <disp-formula id="App1.Ch1.S1.E43" content-type="numbered"><label>A2</label><mml:math id="M446" display="block"><mml:mrow><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">ˇ</mml:mo></mml:mover><mml:mo>(</mml:mo><mml:mi>z</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:msub><mml:mi>s</mml:mi><mml:mo>max⁡</mml:mo></mml:msub><mml:mfenced open="(" close=")"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>+</mml:mo><mml:mi>cos⁡</mml:mi><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi>n</mml:mi><mml:mi mathvariant="italic">π</mml:mi><mml:mi>z</mml:mi></mml:mrow><mml:mi>D</mml:mi></mml:mfrac></mml:mstyle></mml:mfenced></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

        with the maximum salinity <inline-formula><mml:math id="M447" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mo>max⁡</mml:mo></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">30</mml:mn></mml:mrow></mml:math></inline-formula> g kg<sup>−1</sup> where <inline-formula><mml:math id="M449" display="inline"><mml:mi>n</mml:mi></mml:math></inline-formula> is a positive integer, and <inline-formula><mml:math id="M450" display="inline"><mml:mi>D</mml:mi></mml:math></inline-formula> the thickness of the fluid inside the beaker. For <inline-formula><mml:math id="M451" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>, the fluid is unstirred, and we only have a single layer of salty water underneath the freshwater with mixed conditions in between (see Fig. <xref ref-type="fig" rid="F1"/>a). Increasing <inline-formula><mml:math id="M452" display="inline"><mml:mi>n</mml:mi></mml:math></inline-formula> may be viewed as a simple model for a stirring process that creates an increasing number of interfaces between salty and fresh water. For <inline-formula><mml:math id="M453" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">30</mml:mn></mml:mrow></mml:math></inline-formula> (Fig. <xref ref-type="fig" rid="F1"/>b), the stirring process has created 30 such interfaces, and for <inline-formula><mml:math id="M454" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">90</mml:mn></mml:mrow></mml:math></inline-formula> (Fig. <xref ref-type="fig" rid="F1"/>c), 90 interfaces can be defined. It should be clear that in a real beaker, the stirring process induces salinity patches and streaks that are highly distorted and three-dimensional. Nevertheless, our simple one-dimensional model is sufficient to illustrate the basic effects of stirring and mixing as shown in the following.</p>
      <p id="d2e12907">To investigate the temporal evolution of the salinity layers as a result of mixing, we insert an ansatz of the form

          <disp-formula id="App1.Ch1.S1.E44" content-type="numbered"><label>A3</label><mml:math id="M455" display="block"><mml:mrow><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">ˇ</mml:mo></mml:mover><mml:mo>(</mml:mo><mml:mi>z</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:msub><mml:mi>s</mml:mi><mml:mo>max⁡</mml:mo></mml:msub><mml:mfenced close=")" open="("><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>+</mml:mo><mml:mi>a</mml:mi><mml:mo>(</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mi>cos⁡</mml:mi><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi>n</mml:mi><mml:mi mathvariant="italic">π</mml:mi><mml:mi>z</mml:mi></mml:mrow><mml:mi>D</mml:mi></mml:mfrac></mml:mstyle></mml:mfenced></mml:mrow></mml:mfenced></mml:mrow></mml:math></disp-formula>

        into Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E42"/>), where <inline-formula><mml:math id="M456" display="inline"><mml:mrow><mml:mi>a</mml:mi><mml:mo>(</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> denotes the dimensionless amplitude of the salinity with <inline-formula><mml:math id="M457" display="inline"><mml:mrow><mml:mi>a</mml:mi><mml:mo>(</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle></mml:mrow></mml:math></inline-formula>. This yields a differential equation of the form

          <disp-formula id="App1.Ch1.S1.E45" content-type="numbered"><label>A4</label><mml:math id="M458" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">d</mml:mi><mml:mi>a</mml:mi><mml:mo>(</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mi mathvariant="normal">d</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi>a</mml:mi><mml:mo>(</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mi mathvariant="italic">τ</mml:mi></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

        where <inline-formula><mml:math id="M459" display="inline"><mml:mrow><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mi>D</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>/</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="italic">κ</mml:mi><mml:msup><mml:mi>n</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msup><mml:mi mathvariant="italic">π</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> combines all parameters of the problem. The solution of Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E45"/>) is of the form

          <disp-formula id="App1.Ch1.S1.E46" content-type="numbered"><label>A5</label><mml:math id="M460" display="block"><mml:mrow><mml:mi>a</mml:mi><mml:mo>(</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mstyle scriptlevel="+1"><mml:mfrac><mml:mi>t</mml:mi><mml:mi mathvariant="italic">τ</mml:mi></mml:mfrac></mml:mstyle></mml:mrow></mml:msup><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

        which reveals that <inline-formula><mml:math id="M461" display="inline"><mml:mi mathvariant="italic">τ</mml:mi></mml:math></inline-formula> plays the role of a <italic>mixing time scale</italic>.</p>
      <p id="d2e13130">The blue lines shown in Fig. <xref ref-type="fig" rid="F1"/> (see the figure caption for the parameters chosen) illustrate the behaviour of the solution found above for different values of <inline-formula><mml:math id="M462" display="inline"><mml:mi>n</mml:mi></mml:math></inline-formula>. For <inline-formula><mml:math id="M463" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> (no stirring, Fig. <xref ref-type="fig" rid="F1"/>a) the effect of mixing is seen to be negligible after a period of ten minutes. If some gentle stirring is applied (figuratively using the spoon) such that <inline-formula><mml:math id="M464" display="inline"><mml:mi>n</mml:mi></mml:math></inline-formula> is increased to 30, considerable mixing effects can be seen already after 10 min (Fig. <xref ref-type="fig" rid="F1"/>b). Only intensive stirring (<inline-formula><mml:math id="M465" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">90</mml:mn></mml:mrow></mml:math></inline-formula>) leads to the desired result of (almost) complete mixing within a reasonable amount of time (Fig. <xref ref-type="fig" rid="F1"/>c).  For the parameters chosen, the mixing time scale is about <inline-formula><mml:math id="M466" display="inline"><mml:mrow><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">17</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mn mathvariant="normal">000</mml:mn></mml:mrow></mml:math></inline-formula> min for the case of no stirring (<inline-formula><mml:math id="M467" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>), about <inline-formula><mml:math id="M468" display="inline"><mml:mrow><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">19</mml:mn></mml:mrow></mml:math></inline-formula> min for little stirring (<inline-formula><mml:math id="M469" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">30</mml:mn></mml:mrow></mml:math></inline-formula>), and about <inline-formula><mml:math id="M470" display="inline"><mml:mrow><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> min for strong stirring (<inline-formula><mml:math id="M471" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">90</mml:mn></mml:mrow></mml:math></inline-formula>).</p>
</app>

<app id="App1.Ch1.S2">
  <label>Appendix B</label><title>Salinity-variance equations</title>
      <p id="d2e13264">This appendix introduces some Reynolds-averaged salinity-variance or salinity-square equations to demonstrate the function of the salinity variance decay <inline-formula><mml:math id="M472" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> as sink term. Based on Eq. (<xref ref-type="disp-formula" rid="Ch1.E8"/>) and using Eq. (<xref ref-type="disp-formula" rid="Ch1.E9"/>), the salinity variance equation with the local variance per unit volume <inline-formula><mml:math id="M473" display="inline"><mml:mrow><mml:msup><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">tot</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mo>(</mml:mo><mml:mi>s</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">¯</mml:mo></mml:mover><mml:mi mathvariant="normal">tot</mml:mi></mml:msub><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> and the volume-averaged salinity <inline-formula><mml:math id="M474" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">¯</mml:mo></mml:mover><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is of the following form:

          <disp-formula id="App1.Ch1.S2.E47" content-type="numbered"><label>B1</label><mml:math id="M475" display="block"><mml:mrow><mml:mtable class="array" columnalign="left"><mml:mtr><mml:mtd><mml:mrow><mml:munder><mml:munder class="underbrace"><mml:mrow><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:msup><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">tot</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>+</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">tot</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi mathvariant="normal">d</mml:mi><mml:mrow><mml:mi mathvariant="normal">d</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">¯</mml:mo></mml:mover><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mtext> change</mml:mtext></mml:munder><mml:mo>+</mml:mo><mml:munder><mml:munder class="underbrace"><mml:mrow><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>(</mml:mo><mml:mi>u</mml:mi><mml:msup><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">tot</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>(</mml:mo><mml:mi>v</mml:mi><mml:msup><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">tot</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>(</mml:mo><mml:mi>w</mml:mi><mml:msup><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">tot</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mtext>advection</mml:mtext></mml:munder></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:munder><mml:munder class="underbrace"><mml:mrow><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mo>∂</mml:mo><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:msup><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">tot</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle></mml:mrow></mml:mfenced><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mo>∂</mml:mo><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:msup><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">tot</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle></mml:mrow></mml:mfenced><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mo>∂</mml:mo><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:msup><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">tot</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle></mml:mrow></mml:mfenced></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mtext>diffusion</mml:mtext></mml:munder></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:munder><mml:munder class="underbrace"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mtext>mixing</mml:mtext></mml:munder><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:math></disp-formula>

        where the advective and diffusive flux divergences conservatively re-distribute local variance. Mixing <inline-formula><mml:math id="M476" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the sink term for the local variance. An extra term due to the non-constant volume-averaged salinity <inline-formula><mml:math id="M477" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">¯</mml:mo></mml:mover><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is included in the change term <xref ref-type="bibr" rid="bib1.bibx109" id="paren.271"><named-content content-type="post">see <xref ref-type="bibr" rid="bib1.bibx19" id="text.272"/> for hints to the derivation</named-content></xref>. The variance budget of the entire estuary results from integration of Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S2.E47"/>) over the volume of the estuary:

          <disp-formula id="App1.Ch1.S2.E48" content-type="numbered"><label>B2</label><mml:math id="M478" display="block"><mml:mtable class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:munder><mml:munder class="underbrace"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi mathvariant="normal">d</mml:mi><mml:mrow><mml:mi mathvariant="normal">d</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:munder><mml:mo movablelimits="false">∫</mml:mo><mml:mi>V</mml:mi></mml:munder><mml:msup><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">tot</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mtext>d</mml:mtext><mml:mi>V</mml:mi></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mtext>change</mml:mtext></mml:munder><mml:mo>+</mml:mo><mml:munder><mml:munder class="underbrace"><mml:mrow><mml:munder><mml:mo movablelimits="false">∫</mml:mo><mml:mi>A</mml:mi></mml:munder><mml:mfenced close=")" open="("><mml:mrow><mml:mi mathvariant="bold-italic">u</mml:mi><mml:msup><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">tot</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mi mathvariant="bold">∇</mml:mi><mml:msup><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">tot</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfenced><mml:mo>⋅</mml:mo><mml:mtext>d</mml:mtext><mml:mi mathvariant="bold-italic">A</mml:mi></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mtext>boundary transport</mml:mtext></mml:munder></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:munder><mml:munder class="underbrace"><mml:mrow><mml:munder><mml:mo movablelimits="false">∫</mml:mo><mml:mi>V</mml:mi></mml:munder><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mtext>d</mml:mtext><mml:mi>V</mml:mi></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mtext>mixing</mml:mtext></mml:munder></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

        <xref ref-type="bibr" rid="bib1.bibx109 bib1.bibx20" id="paren.273"/>, where <inline-formula><mml:math id="M479" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula> is the boundary of the estuary towards the river and the ocean, <inline-formula><mml:math id="M480" display="inline"><mml:mi mathvariant="bold-italic">u</mml:mi></mml:math></inline-formula> is the velocity vector at the open boundary and <inline-formula><mml:math id="M481" display="inline"><mml:mrow><mml:mtext>d</mml:mtext><mml:mi mathvariant="bold-italic">A</mml:mi></mml:mrow></mml:math></inline-formula> is the normal vector orthogonal to the area element <inline-formula><mml:math id="M482" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula> pointing out of the estuary, see details in <xref ref-type="bibr" rid="bib1.bibx93" id="text.274"/>. While the volume integrated mixing is the only sink term in Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S2.E48"/>), an explicit source does not exist. Instead variance may enter the estuary via the boundary transport term as freshwater from the river and as saline water from the adjacent coastal ocean.</p>
      <p id="d2e13855">Inserting Eq. (<xref ref-type="disp-formula" rid="Ch1.E7"/>) into Eq. (<xref ref-type="disp-formula" rid="Ch1.E6"/>), or multiplying the salinity budget equation Eq. (<xref ref-type="disp-formula" rid="Ch1.E8"/>) by <inline-formula><mml:math id="M483" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi>s</mml:mi></mml:mrow></mml:math></inline-formula>, we obtain a budget equation for the squared salinity, which has the same mixing term as the local variance equation Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S2.E47"/>):

          <disp-formula id="App1.Ch1.S2.E49" content-type="numbered"><label>B3</label><mml:math id="M484" display="block"><mml:mtable rowspacing="0.2ex" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:munder><mml:munder class="underbrace"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mtext>change</mml:mtext></mml:munder><mml:munder><mml:munder class="underbrace"><mml:mrow><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>(</mml:mo><mml:mi>u</mml:mi><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>(</mml:mo><mml:mi>v</mml:mi><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>(</mml:mo><mml:mi>w</mml:mi><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mtext>advection</mml:mtext></mml:munder></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:munder><mml:munder class="underbrace"><mml:mrow><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mo>∂</mml:mo><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mo>∂</mml:mo><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mo>∂</mml:mo><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mtext>diffusion</mml:mtext></mml:munder></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:munder><mml:munder class="underbrace"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mtext>mixing</mml:mtext></mml:munder><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

        which is the parameterised version of Eq. (<xref ref-type="disp-formula" rid="Ch1.E6"/>). Often, it is more handy to diagnose the budget of the squared salinity Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S2.E49"/>) rather than the local variance Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S2.E47"/>), since the time-variable volume-averaged salinity <inline-formula><mml:math id="M485" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">¯</mml:mo></mml:mover><mml:mi mathvariant="normal">tot</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> does not need to be considered.</p>
</app>

<app id="App1.Ch1.S3">
  <label>Appendix C</label><title>Elbe River estuary model</title>
<sec id="App1.Ch1.S3.SS1">
  <label>C1</label><title>Study region</title>
      <p id="d2e14153">The Elbe River estuary is located in northern Germany and extends over 150 km from a weir south of Hamburg to the German Bight in the North Sea. It is an M<sub>2</sub>-dominated, mesotidal estuary at a mean tidal range of <inline-formula><mml:math id="M487" display="inline"><mml:mn mathvariant="normal">3.0</mml:mn></mml:math></inline-formula> to <inline-formula><mml:math id="M488" display="inline"><mml:mn mathvariant="normal">3.5</mml:mn></mml:math></inline-formula> m <xref ref-type="bibr" rid="bib1.bibx5" id="paren.275"/>. The tidal signal is further modified throughout the spring-neap cycle. Its broad salinity range (<inline-formula><mml:math id="M489" display="inline"><mml:mn mathvariant="normal">0.5</mml:mn></mml:math></inline-formula> to <inline-formula><mml:math id="M490" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">30</mml:mn></mml:mrow></mml:math></inline-formula> g kg<sup>−1</sup> within the model domain), medium discharge intensity of about <inline-formula><mml:math id="M492" display="inline"><mml:mn mathvariant="normal">800</mml:mn></mml:math></inline-formula> m<sup>3</sup> s<sup>−1</sup> on a multi-decadal average <xref ref-type="bibr" rid="bib1.bibx153" id="paren.276"/>, and relatively simple, funnel-shaped, single-channel geometry make this estuary an ideal example for the illustration of basic estuarine mixing dynamics. Further, the navigational channel is subject to intensive dredging measures, comparable to other estuaries under high anthropogenic maintenance, and surrounded by extensive tidal flats.</p>

      <fig id="FC1" specific-use="star"><label>Figure C1</label><caption><p id="d2e14245">Overview of the numerical simulation of the Elbe River estuary. <bold>(a)</bold> Downstream section of the setup topography, showing the open boundary in the German Bight as a bold grey line, the distance from the upstream boundary as yellow dots in km, and the location of the cross-channel transect used for the analysis in Fig. <xref ref-type="fig" rid="F2"/> as a red line. <bold>(b)</bold> Average surface salinity. White lines indicate even salinities. <bold>(c)</bold> Average salinity along the thalweg of the navigational channel. Solid (dashed) white lines indicate even (odd) salinities. <bold>(d)</bold> Estuarine circulation in terms of the tidally averaged along-channel velocity <inline-formula><mml:math id="M495" display="inline"><mml:mrow><mml:mo>〈</mml:mo><mml:mi>u</mml:mi><mml:mo>〉</mml:mo></mml:mrow></mml:math></inline-formula> along the thalweg of the navigational channel, where red shading indicates an inflow into the estuary and blue shading indicates an outflow towards the German Bight. In <bold>(b)</bold>–<bold>(d)</bold>, the properties have been averaged for the full month of April 2024.</p></caption>
          <graphic xlink:href="https://os.copernicus.org/articles/22/1875/2026/os-22-1875-2026-f19.png"/>

        </fig>

      <p id="d2e14287">The Elbe is a partially mixed estuary with a medium stratification intensity as shown for the analysis period of April 2024 in Fig. <xref ref-type="fig" rid="FC1"/>b, c, where the spring-neap averaged surface to bottom salinity difference amounts to up to 6–7 g kg<sup>−1</sup>, and the salt intrusion reaches more than 50 km up-estuary. It displays a clear two-layer exchange flow pattern (see Fig. <xref ref-type="fig" rid="FC1"/>d). </p>
      <p id="d2e14308">A more detailed description of the Elbe River estuary can be found in <xref ref-type="bibr" rid="bib1.bibx15" id="text.277"/>, <xref ref-type="bibr" rid="bib1.bibx135" id="text.278"/>, and <xref ref-type="bibr" rid="bib1.bibx22" id="text.279"/>.</p>
</sec>
<sec id="App1.Ch1.S3.SS2">
  <label>C2</label><title>Numerical model and setup</title>
      <p id="d2e14328">The three-dimensional numerical model data used for all Elbe River examples in this paper was created with the General Estuarine Transport Model <xref ref-type="bibr" rid="bib1.bibx11 bib1.bibx74" id="paren.280"><named-content content-type="pre">GETM;</named-content></xref>. For turbulence closure, GETM is coupled to the General Ocean Turbulence Model <xref ref-type="bibr" rid="bib1.bibx14 bib1.bibx92" id="paren.281"><named-content content-type="pre">GOTM;</named-content></xref>, here using a second-order, algebraic closure for a <inline-formula><mml:math id="M497" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula>-<inline-formula><mml:math id="M498" display="inline"><mml:mi mathvariant="italic">ε</mml:mi></mml:math></inline-formula> parameterization <xref ref-type="bibr" rid="bib1.bibx159" id="paren.282"/>.</p>
      <p id="d2e14358">The specific Elbe River estuary setup used here is identical to the setup presented in <xref ref-type="bibr" rid="bib1.bibx136" id="text.283"/> with a high horizontal (<inline-formula><mml:math id="M499" display="inline"><mml:mrow><mml:mn mathvariant="normal">2404</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">397</mml:mn></mml:mrow></mml:math></inline-formula> cells with a mean resolution of <inline-formula><mml:math id="M500" display="inline"><mml:mn mathvariant="normal">80</mml:mn></mml:math></inline-formula> m in along-channel direction and <inline-formula><mml:math id="M501" display="inline"><mml:mn mathvariant="normal">98</mml:mn></mml:math></inline-formula> m in cross-channel direction) and vertical (<inline-formula><mml:math id="M502" display="inline"><mml:mn mathvariant="normal">40</mml:mn></mml:math></inline-formula> adaptive layers) grid resolution. It covers the year 2024 and uses a curvilinear grid with thalweg-following and cross-channel grid lines, resulting in horizontal grid cells of variable size, where the finest resolution is achieved within the navigational channel. The model domain is limited in upstream direction by the location of a weir that marks the end of the upstream tidal intrusion, and in downstream direction by an open boundary within the German Bight.</p>
      <p id="d2e14397">Overall, the Elbe River setup uses a realistic forcing. This includes initial distributions for temperature and salinity as well as tidal elevations and vertical temperature and salinity profiles along the open boundary <xref ref-type="bibr" rid="bib1.bibx35" id="paren.284"/>, the daily-averaged freshwater discharge at the upstream end of the model domain <xref ref-type="bibr" rid="bib1.bibx169" id="paren.285"/> at a constant salinity of 0.5 g kg<sup>−1</sup>, and a 1 km-resolved meteorological forcing <xref ref-type="bibr" rid="bib1.bibx119" id="paren.286"/>.</p>
      <p id="d2e14421">A full setup description along with a process-oriented model performance evaluation can be found in <xref ref-type="bibr" rid="bib1.bibx136" id="text.287"/>.</p>
</sec>
</app>

<app id="App1.Ch1.S4">
  <label>Appendix D</label><title>Coordinate transformation of vertical salinity equation</title>
      <p id="d2e14436">Neglecting horizontal turbulent fluxes, the salinity equation Eq. (<xref ref-type="disp-formula" rid="Ch1.E8"/>) can also be formulated as

              <disp-formula id="App1.Ch1.S4.E50" content-type="numbered"><label>D1</label><mml:math id="M504" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">D</mml:mi><mml:mi>s</mml:mi></mml:mrow><mml:mrow><mml:mi mathvariant="normal">D</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mo>∂</mml:mo><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>

        Assuming a stable salinity stratification with <inline-formula><mml:math id="M505" display="inline"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mi>z</mml:mi><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>, for every isohaline the vertical position can be given by <inline-formula><mml:math id="M506" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mi>z</mml:mi><mml:mi>s</mml:mi></mml:msup><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>,</mml:mo><mml:mi>y</mml:mi><mml:mo>,</mml:mo><mml:mi>s</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> such that Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S4.E50"/>) can be multiplied by <inline-formula><mml:math id="M507" display="inline"><mml:mrow><mml:mo>∂</mml:mo><mml:msup><mml:mi>z</mml:mi><mml:mi>s</mml:mi></mml:msup><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mi>s</mml:mi></mml:mrow></mml:math></inline-formula> and time-averaged on a fixed isohaline, <inline-formula><mml:math id="M508" display="inline"><mml:mrow><mml:mo>〈</mml:mo><mml:msub><mml:mo>〉</mml:mo><mml:mi>s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> to yield

              <disp-formula id="App1.Ch1.S4.E51" content-type="numbered"><label>D2</label><mml:math id="M509" display="block"><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:munder><mml:munder><mml:mrow><mml:mfenced open="〈" close="〉"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msup><mml:mi>z</mml:mi><mml:mi>s</mml:mi></mml:msup></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">D</mml:mi><mml:mi>s</mml:mi></mml:mrow><mml:mrow><mml:mi mathvariant="normal">D</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mrow><mml:mo>=</mml:mo><mml:msub><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:munder></mml:mrow><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mo>∂</mml:mo><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:munder><mml:munder><mml:mrow><mml:mfenced close="〉" open="〈"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mrow><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:msub><mml:mi>j</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:munder></mml:mrow></mml:math></disp-formula>

        and <inline-formula><mml:math id="M510" display="inline"><mml:mrow><mml:msub><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> (the diahaline velocity per unit horizontal area) can be obtained from

              <disp-formula id="App1.Ch1.S4.E52" content-type="numbered"><label>D3</label><mml:math id="M511" display="block"><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mfenced open="〈" close="〉"><mml:mi>w</mml:mi></mml:mfenced><mml:mo>=</mml:mo><mml:mfenced close="〉" open="〈"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">D</mml:mi><mml:mi>z</mml:mi></mml:mrow><mml:mrow><mml:mi mathvariant="normal">D</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced></mml:mrow><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>=</mml:mo><mml:mfenced close="〉" open="〈"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msup><mml:mi>z</mml:mi><mml:mi>s</mml:mi></mml:msup></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mi>u</mml:mi><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msup><mml:mi>z</mml:mi><mml:mi>s</mml:mi></mml:msup></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mi>v</mml:mi><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msup><mml:mi>z</mml:mi><mml:mi>s</mml:mi></mml:msup></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced><mml:mo>+</mml:mo><mml:munder><mml:munder><mml:mrow><mml:mfenced close="〉" open="〈"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msup><mml:mi>z</mml:mi><mml:mi>s</mml:mi></mml:msup></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">D</mml:mi><mml:mi>s</mml:mi></mml:mrow><mml:mrow><mml:mi mathvariant="normal">D</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mrow><mml:mo>=</mml:mo><mml:msub><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:munder></mml:mrow></mml:math></disp-formula>

        Note that the diahaline fluxes <inline-formula><mml:math id="M512" display="inline"><mml:mrow><mml:msub><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M513" display="inline"><mml:mrow><mml:msub><mml:mi>j</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> are defined positive upwards here, whereas they are usually defined positive up-gradient in the literature. For almost flat isohalines <inline-formula><mml:math id="M514" display="inline"><mml:mrow><mml:msub><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub><mml:mo>≈</mml:mo><mml:mfenced close="〉" open="〈"><mml:mrow><mml:mi>w</mml:mi><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:msup><mml:mi>z</mml:mi><mml:mi>s</mml:mi></mml:msup></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced></mml:mrow></mml:math></inline-formula> can be interpreted as the vertical velocity relative to the moving isohalines. Due to the neglect of horizontal turbulent fluxes, the diahaline diffusive salt flux per unit horizontal area <inline-formula><mml:math id="M515" display="inline"><mml:mrow><mml:msub><mml:mi>j</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> in Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S4.E51"/>) is identical to the vertical turbulent salt flux. <xref ref-type="bibr" rid="bib1.bibx57" id="text.288"/> and <xref ref-type="bibr" rid="bib1.bibx135" id="text.289"/> demonstrated that relation Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S4.E51"/>) approximately holds also in realistic estuarine cases where horizontal turbulent fluxes are present. Moreover, relation Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S4.E51"/>) also holds for arbitrary salinity distributions including inversions, based on generalised definitions of <inline-formula><mml:math id="M516" display="inline"><mml:mrow><mml:msub><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M517" display="inline"><mml:mrow><mml:msub><mml:mi>j</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx75" id="paren.290"/>.</p>
</app>

<app id="App1.Ch1.S5">
  <label>Appendix E</label><title>Calibration of two-equation turbulence closure models</title>
      <p id="d2e14981">After carrying out a second-moment closure as briefly described in Sect. <xref ref-type="sec" rid="Ch1.S5.SS2.SSS1"/> and presented in more detail by <xref ref-type="bibr" rid="bib1.bibx10" id="text.291"/> and <xref ref-type="bibr" rid="bib1.bibx159" id="text.292"/> and applying the boundary layer assumption (vertical gradients are much larger than horizontal gradients), the closure results in the down-gradient parameterisation of momentum,

          <disp-formula id="App1.Ch1.S5.E53" content-type="numbered"><label>E1</label><mml:math id="M518" display="block"><mml:mrow><mml:mo>[</mml:mo><mml:mover accent="true"><mml:mi>u</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mover accent="true"><mml:mi>w</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>]</mml:mo><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:msub><mml:mi>A</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>u</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>[</mml:mo><mml:mover accent="true"><mml:mi>v</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mover accent="true"><mml:mi>w</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>]</mml:mo><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:msub><mml:mi>A</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>v</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

        with the eddy viscosity <inline-formula><mml:math id="M519" display="inline"><mml:mrow><mml:msub><mml:mi>A</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, and the down-gradient parameterisation for turbulent tracer flux Eq. (<xref ref-type="disp-formula" rid="Ch1.E7"/>), with the following relation for the eddy viscosity <inline-formula><mml:math id="M520" display="inline"><mml:mrow><mml:msub><mml:mi>A</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and the eddy diffusivity <inline-formula><mml:math id="M521" display="inline"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>:

          <disp-formula id="App1.Ch1.S5.E54" content-type="numbered"><label>E2</label><mml:math id="M522" display="block"><mml:mrow><mml:msub><mml:mi>A</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="italic">μ</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>R</mml:mi><mml:mi>i</mml:mi><mml:mo>)</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msup><mml:mi>k</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mi mathvariant="italic">ε</mml:mi></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo><mml:mspace width="1em" linebreak="nobreak"/><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>(</mml:mo><mml:mi>R</mml:mi><mml:mi>i</mml:mi><mml:mo>)</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msup><mml:mi>k</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mi mathvariant="italic">ε</mml:mi></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

        with the non-dimensional stability functions <inline-formula><mml:math id="M523" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="italic">μ</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M524" display="inline"><mml:mrow><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>′</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> depending in the case of quasi-equilibrium stability functions <xref ref-type="bibr" rid="bib1.bibx38" id="paren.293"/> on the non-dimensional gradient-Richardson number <inline-formula><mml:math id="M525" display="inline"><mml:mrow><mml:mi>R</mml:mi><mml:mi>i</mml:mi></mml:mrow></mml:math></inline-formula>, the turbulent kinetic energy per unit mass, <inline-formula><mml:math id="M526" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula>, and its dissipation rate, <inline-formula><mml:math id="M527" display="inline"><mml:mi mathvariant="italic">ε</mml:mi></mml:math></inline-formula>. The definition of the gradient Richardson number

          <disp-formula id="App1.Ch1.S5.E55" content-type="numbered"><label>E3</label><mml:math id="M528" display="block"><mml:mrow><mml:mi>R</mml:mi><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msup><mml:mi>N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:msubsup><mml:mi>S</mml:mi><mml:mi mathvariant="normal">v</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></disp-formula>

        is given with the squared shear frequency <inline-formula><mml:math id="M529" display="inline"><mml:mrow><mml:msup><mml:mi>N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mo>∂</mml:mo><mml:mi>b</mml:mi><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:math></inline-formula>, the squared vertical shear <inline-formula><mml:math id="M530" display="inline"><mml:mrow><mml:msubsup><mml:mi>S</mml:mi><mml:mi mathvariant="normal">v</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>=</mml:mo><mml:mo>(</mml:mo><mml:mo>∂</mml:mo><mml:mi>u</mml:mi><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mi>z</mml:mi><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mo>∂</mml:mo><mml:mi>v</mml:mi><mml:mo>/</mml:mo><mml:mo>∂</mml:mo><mml:mi>z</mml:mi><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>. The stability functions <inline-formula><mml:math id="M531" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="italic">μ</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M532" display="inline"><mml:mrow><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>′</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> include the entire second-moment closure <xref ref-type="bibr" rid="bib1.bibx10" id="paren.294"/>.</p>
      <p id="d2e15367">For the case of two-equation turbulence closure models the full transport equations for <inline-formula><mml:math id="M533" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M534" display="inline"><mml:mi mathvariant="italic">ε</mml:mi></mml:math></inline-formula> are calculated <xref ref-type="bibr" rid="bib1.bibx138" id="paren.295"/>. Instead of the dissipation rate equation, other length-scale related properties such as the turbulence frequency <inline-formula><mml:math id="M535" display="inline"><mml:mrow><mml:mi mathvariant="italic">ω</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="italic">ε</mml:mi><mml:mo>/</mml:mo><mml:mi>k</mml:mi></mml:mrow></mml:math></inline-formula> could be modelled, following the generic length scale (GLS) approach by <xref ref-type="bibr" rid="bib1.bibx158" id="text.296"/>. The <inline-formula><mml:math id="M536" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula>-<inline-formula><mml:math id="M537" display="inline"><mml:mi mathvariant="italic">ε</mml:mi></mml:math></inline-formula> model, as it is typically used in three-dimensional coastal ocean models, is of the following form:

          <disp-formula id="App1.Ch1.S5.E56" content-type="numbered"><label>E4</label><mml:math id="M538" display="block"><mml:mtable class="array" columnalign="left"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>k</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>(</mml:mo><mml:mi>u</mml:mi><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>(</mml:mo><mml:mi>v</mml:mi><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>(</mml:mo><mml:mi>w</mml:mi><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mo>∂</mml:mo><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mfenced close=")" open="("><mml:mrow><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msub><mml:mi>A</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi>k</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>k</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>=</mml:mo><mml:mi>P</mml:mi><mml:mo>+</mml:mo><mml:mi>B</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="italic">ε</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mi mathvariant="italic">ε</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>(</mml:mo><mml:mi>u</mml:mi><mml:mi mathvariant="italic">ε</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>(</mml:mo><mml:mi>v</mml:mi><mml:mi mathvariant="italic">ε</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mo>(</mml:mo><mml:mi>w</mml:mi><mml:mi mathvariant="italic">ε</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mo>∂</mml:mo><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mfenced open="(" close=")"><mml:mrow><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msub><mml:mi>A</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="italic">ε</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mi mathvariant="italic">ε</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>=</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi mathvariant="italic">ε</mml:mi><mml:mi>k</mml:mi></mml:mfrac></mml:mstyle></mml:mstyle><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mi>P</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mi>B</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="italic">ε</mml:mi></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

        with the shear production <inline-formula><mml:math id="M539" display="inline"><mml:mrow><mml:mi>P</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi>A</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:msubsup><mml:mi>S</mml:mi><mml:mi mathvariant="normal">v</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula>, and the vertical buoyancy flux <inline-formula><mml:math id="M540" display="inline"><mml:mrow><mml:mi>B</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:msup><mml:mi>N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>. In Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S5.E56"/>), <inline-formula><mml:math id="M541" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M542" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M543" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M544" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi>k</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M545" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="italic">ε</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are empirical parameters. The horizontal diffusive transport of <inline-formula><mml:math id="M546" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M547" display="inline"><mml:mi mathvariant="italic">ε</mml:mi></mml:math></inline-formula> is generally ignored. To demonstrate how these two-equation turbulence closure models are calibrated to predict the correct response of mixing to stratification and shear, the transport equations for <inline-formula><mml:math id="M548" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M549" display="inline"><mml:mi mathvariant="italic">ε</mml:mi></mml:math></inline-formula> are analysed for homogenous shear-layers where the advective and diffusive transport-divergence terms vanish. Necessary conditions for equilibrium solutions of Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S5.E56"/>) are found by setting the left-hand sides to zero, such that Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S5.E56"/>) can be transformed to

          <disp-formula id="App1.Ch1.S5.E57" content-type="numbered"><label>E5</label><mml:math id="M550" display="block"><mml:mrow><mml:mfenced open="" close="}"><mml:mtable class="array" columnalign="left left"><mml:mtr><mml:mtd><mml:mrow><mml:mi>P</mml:mi><mml:mo>+</mml:mo><mml:mi>B</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="italic">ε</mml:mi></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mi>P</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mi>B</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="italic">ε</mml:mi></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mo>⇒</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>(</mml:mo><mml:mi>R</mml:mi><mml:msub><mml:mi>i</mml:mi><mml:mi mathvariant="normal">st</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="italic">μ</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>R</mml:mi><mml:msub><mml:mi>i</mml:mi><mml:mi mathvariant="normal">st</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>⋅</mml:mo><mml:mi>R</mml:mi><mml:msub><mml:mi>i</mml:mi><mml:mi mathvariant="normal">st</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

        with the steady-state gradient Richardson number <inline-formula><mml:math id="M551" display="inline"><mml:mrow><mml:mi>R</mml:mi><mml:msub><mml:mi>i</mml:mi><mml:mi mathvariant="normal">st</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> denoting the gradient Richardson number for the stationary solution. To obtain the result of Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S5.E57"/>), first <inline-formula><mml:math id="M552" display="inline"><mml:mi mathvariant="italic">ε</mml:mi></mml:math></inline-formula> was eliminated. With the well-calibrated parameters <inline-formula><mml:math id="M553" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.44</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M554" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.92</mml:mn></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx138" id="paren.297"/> and <inline-formula><mml:math id="M555" display="inline"><mml:mrow><mml:mi>R</mml:mi><mml:msub><mml:mi>i</mml:mi><mml:mi mathvariant="normal">st</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.25</mml:mn></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx142" id="paren.298"/>  Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S5.E57"/>) provides an implicit non-linear equation to calibrate <inline-formula><mml:math id="M556" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> which determines the damping effect of stratification on turbulence <xref ref-type="bibr" rid="bib1.bibx10" id="paren.299"/>. For the second-moment closure by <xref ref-type="bibr" rid="bib1.bibx27" id="text.300"/> this leads to <inline-formula><mml:math id="M557" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.74</mml:mn></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx159" id="paren.301"/>. It can be shown that for a large gradient Richardson number with <inline-formula><mml:math id="M558" display="inline"><mml:mrow><mml:mi>R</mml:mi><mml:mi>i</mml:mi><mml:mo>&gt;</mml:mo><mml:mi>R</mml:mi><mml:msub><mml:mi>i</mml:mi><mml:mi mathvariant="normal">st</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> turbulence is damped due to stable stratification and vice versa <xref ref-type="bibr" rid="bib1.bibx10" id="paren.302"/>. This means that an increased steady-state gradient Richardson number with <inline-formula><mml:math id="M559" display="inline"><mml:mrow><mml:mi>R</mml:mi><mml:msub><mml:mi>i</mml:mi><mml:mi mathvariant="normal">st</mml:mi></mml:msub><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0.25</mml:mn></mml:mrow></mml:math></inline-formula> will lead to increased turbulence for a given <inline-formula><mml:math id="M560" display="inline"><mml:mrow><mml:mi>R</mml:mi><mml:mi>i</mml:mi></mml:mrow></mml:math></inline-formula> and vice versa <xref ref-type="bibr" rid="bib1.bibx159" id="paren.303"/>. This principle has been used by <xref ref-type="bibr" rid="bib1.bibx132" id="text.304"/> to decrease physical mixing by substantially lowering <inline-formula><mml:math id="M561" display="inline"><mml:mrow><mml:mi>R</mml:mi><mml:msub><mml:mi>i</mml:mi><mml:mi mathvariant="normal">st</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> in order to account for the too high numerical mixing of an estuarine model, see Sect. <xref ref-type="sec" rid="Ch1.S5.SS2.SSS2"/>. Interestingly, steady-state solutions of Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S5.E56"/>) under the neglect of transport divergences are also provided by

          <disp-formula id="App1.Ch1.S5.E58" content-type="numbered"><label>E6</label><mml:math id="M562" display="block"><mml:mtable rowspacing="0.2ex" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mi mathvariant="normal">Γ</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mfenced close=")" open="("><mml:mrow><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>B</mml:mi><mml:mi mathvariant="italic">ε</mml:mi></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced><mml:mi mathvariant="normal">st</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mtext>and</mml:mtext><mml:mspace linebreak="nobreak" width="1em"/><mml:msub><mml:mi mathvariant="normal">Rf</mml:mi><mml:mi mathvariant="normal">st</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mfenced open="(" close=")"><mml:mrow><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>B</mml:mi><mml:mi>P</mml:mi></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced><mml:mi mathvariant="normal">st</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

        For the settings of <inline-formula><mml:math id="M563" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M564" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M565" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> given above, a mixing efficiency of <inline-formula><mml:math id="M566" display="inline"><mml:mrow><mml:mi mathvariant="normal">Γ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.21</mml:mn></mml:mrow></mml:math></inline-formula> and a steady-state flux Richardson number of <inline-formula><mml:math id="M567" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Rf</mml:mi><mml:mi mathvariant="normal">st</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.17</mml:mn></mml:mrow></mml:math></inline-formula> result <xref ref-type="bibr" rid="bib1.bibx122" id="paren.305"><named-content content-type="pre">both close to the generic values of <inline-formula><mml:math id="M568" display="inline"><mml:mrow><mml:mi mathvariant="normal">Γ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.2</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M569" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Rf</mml:mi><mml:mi mathvariant="normal">st</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.15</mml:mn></mml:mrow></mml:math></inline-formula> by</named-content></xref>, see the derivations by <xref ref-type="bibr" rid="bib1.bibx157" id="text.306"/>.</p>
</app>

<app id="App1.Ch1.S6">
  <label>Appendix F</label><title>Derivations for numerical mixing example</title>
<sec id="App1.Ch1.S6.SS1">
  <label>F1</label><title>Discretisation of the one-dimensional advection-diffusion equation</title>
      <p id="d2e16432">To illustrate the quantification of physical and numerical mixing, the simple case of the one-dimensional advection-diffusion equation and its discretisation by means of a first-order upstream scheme for the advection term and a central-difference scheme for the diffusion term is examined here. The one-dimensional advection-diffusion equation is of the following form:

            <disp-formula id="App1.Ch1.S6.E59" content-type="numbered"><label>F1</label><mml:math id="M570" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mi>u</mml:mi><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>-</mml:mo><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msup><mml:mo>∂</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mi>s</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          with the constant advection velocity <inline-formula><mml:math id="M571" display="inline"><mml:mi>u</mml:mi></mml:math></inline-formula> and the positive and constant physical diffusivity <inline-formula><mml:math id="M572" display="inline"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>. Multiplying Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E59"/>) by <inline-formula><mml:math id="M573" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi>s</mml:mi></mml:mrow></mml:math></inline-formula> results in the one-dimensional version of Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S2.E49"/>):

            <disp-formula id="App1.Ch1.S6.E60" content-type="numbered"><label>F2</label><mml:math id="M574" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mi>u</mml:mi><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>-</mml:mo><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msup><mml:mo>∂</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:munder><mml:munder class="underbrace"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:msup><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:munder><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          with the physical mixing <inline-formula><mml:math id="M575" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> on the right-hand side as a sink term. For <inline-formula><mml:math id="M576" display="inline"><mml:mrow><mml:mi>u</mml:mi><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>, a straight-forward explicit-in-time discretisation for Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E59"/>) with constant time step <inline-formula><mml:math id="M577" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:math></inline-formula> and constant spatial increment <inline-formula><mml:math id="M578" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:math></inline-formula> is given by

            <disp-formula id="App1.Ch1.S6.E61" content-type="numbered"><label>F3</label><mml:math id="M579" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mrow><mml:mi>n</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mi>u</mml:mi><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>-</mml:mo><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>+</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          with a first-order upstream discretisation for the advection term and a central-difference discretisation for the diffusion term. In Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E61"/>), the subscripts <inline-formula><mml:math id="M580" display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula> indicate the spatial increment and the superscripts <inline-formula><mml:math id="M581" display="inline"><mml:mi>n</mml:mi></mml:math></inline-formula> indicate the number of the time step. For a negative velocity <inline-formula><mml:math id="M582" display="inline"><mml:mrow><mml:mi>u</mml:mi><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>, the upstream discretisation of the advection term would simply mean to exchange <inline-formula><mml:math id="M583" display="inline"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:math></inline-formula> by <inline-formula><mml:math id="M584" display="inline"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:math></inline-formula>. The scheme is numerically stable for a Courant number of <inline-formula><mml:math id="M585" display="inline"><mml:mrow><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>=</mml:mo><mml:mo>|</mml:mo><mml:mi>u</mml:mi><mml:mo>|</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> and the diffusion number <inline-formula><mml:math id="M586" display="inline"><mml:mrow><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>≤</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle></mml:mrow></mml:math></inline-formula>. Multiplication of Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E61"/>) by <inline-formula><mml:math id="M587" display="inline"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mrow><mml:mi>n</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msubsup><mml:mo>+</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:math></inline-formula> (equivalent to the multiplication of Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E59"/>) by <inline-formula><mml:math id="M588" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi>s</mml:mi></mml:mrow></mml:math></inline-formula>) and subsequent reorganisation results in a diagnostic equation for the advection and diffusion of <inline-formula><mml:math id="M589" display="inline"><mml:mrow><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>, as reproduced by the discretisation of the advection-diffusion equation Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E59"/>):

            <disp-formula id="App1.Ch1.S6.E62" content-type="numbered"><label>F4</label><mml:math id="M590" display="block"><mml:mrow><mml:mtable class="array" rowspacing="5.690551pt 0.2ex 0.2ex" columnalign="left"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mrow><mml:mi>n</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msubsup></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>+</mml:mo><mml:mi>u</mml:mi><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>-</mml:mo><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>=</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>-</mml:mo><mml:munder><mml:munder class="underbrace"><mml:mtable class="substack"><mml:mtr><mml:mtd><mml:mn mathvariant="normal">2</mml:mn><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mfenced close="" open="{"><mml:mrow><mml:mo>(</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>)</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mo>-</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mi mathvariant="italic">μ</mml:mi></mml:mrow></mml:mfenced></mml:mrow></mml:mfenced></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mfenced open="" close="}"><mml:mrow><mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mo>-</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">3</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mi mathvariant="italic">μ</mml:mi></mml:mrow></mml:mfenced><mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfenced></mml:mtd></mml:mtr></mml:mtable><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mrow><mml:mtext>discrete physical mixing</mml:mtext><mml:mo>,</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mrow><mml:mi mathvariant="normal">s</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">phy</mml:mi><mml:mo>,</mml:mo><mml:mi>i</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:munder></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>-</mml:mo><mml:munder><mml:munder class="underbrace"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mi>u</mml:mi><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle></mml:mstyle><mml:mfenced open="(" close=")"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">μ</mml:mi></mml:mrow></mml:mfenced><mml:msup><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">︸</mml:mo></mml:munder><mml:mrow><mml:mtext>numerical mixing</mml:mtext><mml:mo>,</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mrow><mml:mi mathvariant="normal">s</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">num</mml:mi><mml:mo>,</mml:mo><mml:mi>i</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:munder><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:math></disp-formula>

          where the second and third lines are the discrete physical mixing and the last line is the numerical mixing. A step-by-step derivation of Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E62"/>) is given in Sect. <xref ref-type="sec" rid="App1.Ch1.S6.SS2"/>. The left-hand side of Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E62"/>) is the discretisation of the advection and diffusion of <inline-formula><mml:math id="M591" display="inline"><mml:mrow><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> and the first term on the right-hand side is a consistent discretisation of the physical mixing, where the non-dimensional numerical parameters <inline-formula><mml:math id="M592" display="inline"><mml:mi mathvariant="italic">μ</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M593" display="inline"><mml:mi mathvariant="italic">ν</mml:mi></mml:math></inline-formula> determine the weights for the composition of the discrete squared salinity gradient by means of the discrete values <inline-formula><mml:math id="M594" display="inline"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M595" display="inline"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M596" display="inline"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:math></inline-formula>. Although this term partially depends on numerical parameters, we associate it with physical mixing, since it is proportional to the eddy diffusivity <inline-formula><mml:math id="M597" display="inline"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. The second term on the right-hand side is a sink term for stable conditions with <inline-formula><mml:math id="M598" display="inline"><mml:mrow><mml:mn mathvariant="normal">0</mml:mn><mml:mo>≤</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>, and is therefore called the numerical mixing term <xref ref-type="bibr" rid="bib1.bibx13" id="paren.307"/>. With the numerical diffusivity <inline-formula><mml:math id="M599" display="inline"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">num</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mi>u</mml:mi><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">μ</mml:mi></mml:mrow></mml:mfenced></mml:mrow></mml:math></inline-formula> it has a similar structure as the physical mixing, being twice the diffusivity times the tracer-gradient square.</p>
</sec>
<sec id="App1.Ch1.S6.SS2">
  <label>F2</label><title>Derivation of physical and numerical mixing for the one-dimensional advection-diffusion equation</title>
      <p id="d2e17637">Here we show the step-by-step calculation of the physical and numerical mixing for the advection-diffusion equation with first-order upstream (FOU) discretisation for advection and central difference discretisation for diffusion Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E61"/>), which is the starting point here:

            <disp-formula id="App1.Ch1.S6.E63" content-type="numbered"><label>F5</label><mml:math id="M600" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mrow><mml:mi>n</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mi>u</mml:mi><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>-</mml:mo><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>+</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>

          Multiplication of Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E63"/>) by <inline-formula><mml:math id="M601" display="inline"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mrow><mml:mi>n</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msubsup><mml:mo>+</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:math></inline-formula> results in

            <disp-formula id="App1.Ch1.S6.E64" content-type="numbered"><label>F6</label><mml:math id="M602" display="block"><mml:mtable class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mrow><mml:mi>n</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msubsup></mml:mrow></mml:mfenced><mml:munder><mml:mn mathvariant="normal">2</mml:mn><mml:mo mathvariant="normal">¯</mml:mo></mml:munder></mml:msup><mml:mo>-</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mfenced><mml:munder><mml:mn mathvariant="normal">2</mml:mn><mml:mo mathvariant="normal">¯</mml:mo></mml:munder></mml:msup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mi>u</mml:mi><mml:munder><mml:mrow><mml:mfenced open="(" close=")"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mrow><mml:mi>n</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msubsup><mml:mo>+</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mfenced></mml:mrow><mml:mo mathvariant="normal">¯</mml:mo></mml:munder><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>-</mml:mo><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:munder><mml:mrow><mml:mfenced close=")" open="("><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mrow><mml:mi>n</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msubsup><mml:mo>+</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mfenced></mml:mrow><mml:mo mathvariant="normal">¯</mml:mo></mml:munder><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>+</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

          where we mark changes from step to step by an underline. Substitution of

            <disp-formula id="App1.Ch1.S6.E65" content-type="numbered"><label>F7</label><mml:math id="M603" display="block"><mml:mtable class="array" rowspacing="3pt" columnalign="left left"><mml:mtr><mml:mtd><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mrow><mml:mi>n</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msubsup></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mfenced open="(" close=")"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mfenced><mml:mo>+</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>+</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

          with the Courant number <inline-formula><mml:math id="M604" display="inline"><mml:mrow><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>=</mml:mo><mml:mi>u</mml:mi><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:math></inline-formula> and the stability number for diffusion <inline-formula><mml:math id="M605" display="inline"><mml:mrow><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> gives

            <disp-formula id="App1.Ch1.S6.E66" content-type="numbered"><label>F8</label><mml:math id="M606" display="block"><mml:mtable class="array" columnalign="left"><mml:mtr><mml:mtd><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mrow><mml:mi>n</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msubsup></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo mathsize="2.0em">(</mml:mo><mml:munder><mml:mrow><mml:mi mathvariant="italic">ν</mml:mi><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">¯</mml:mo></mml:munder><mml:mo mathsize="2.0em">)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mo mathsize="2.0em">(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo mathsize="2.0em">)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo mathsize="2.0em">(</mml:mo><mml:munder><mml:mrow><mml:mi mathvariant="italic">ν</mml:mi><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">¯</mml:mo></mml:munder><mml:mo mathsize="2.0em">)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mo mathsize="2.0em">(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>+</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo mathsize="2.0em">)</mml:mo><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

            <disp-formula id="App1.Ch1.S6.E67" content-type="numbered"><label>F9</label><mml:math id="M607" display="block"><mml:mrow><mml:mtable class="array" columnalign="left"><mml:mtr><mml:mtd><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mrow><mml:mi>n</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msubsup></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo mathsize="2.0em">(</mml:mo><mml:munder><mml:mrow><mml:mi mathvariant="italic">ν</mml:mi><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">¯</mml:mo></mml:munder></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mspace width="1em" linebreak="nobreak"/><mml:mspace linebreak="nobreak" width="1em"/><mml:munder><mml:mrow><mml:mo>-</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>+</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">¯</mml:mo></mml:munder><mml:mo mathsize="2.0em">)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo mathsize="2.0em">(</mml:mo><mml:munder><mml:mrow><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">¯</mml:mo></mml:munder></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mspace linebreak="nobreak" width="1em"/><mml:mspace linebreak="nobreak" width="1em"/><mml:munder><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">¯</mml:mo></mml:munder></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mspace linebreak="nobreak" width="1em"/><mml:mspace width="1em" linebreak="nobreak"/><mml:munder><mml:mrow><mml:mo>+</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">¯</mml:mo></mml:munder><mml:mo mathsize="2.0em">)</mml:mo><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:math></disp-formula>

          Reordering gives

            <disp-formula id="App1.Ch1.S6.E68" content-type="numbered"><label>F10</label><mml:math id="M608" display="block"><mml:mrow><mml:mtable class="array" columnalign="left"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mrow><mml:mi>n</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msubsup></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>=</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo mathsize="2.0em">(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>+</mml:mo><mml:munder><mml:mn mathvariant="normal">2</mml:mn><mml:mo mathvariant="normal">¯</mml:mo></mml:munder><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:munder><mml:mn mathvariant="normal">3</mml:mn><mml:mo mathvariant="normal">¯</mml:mo></mml:munder><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mspace width="1em" linebreak="nobreak"/><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>-</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo mathsize="2.0em">)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo mathsize="2.0em">(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>-</mml:mo><mml:munder><mml:mn mathvariant="normal">4</mml:mn><mml:mo mathvariant="normal">¯</mml:mo></mml:munder><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:munder><mml:mn mathvariant="normal">2</mml:mn><mml:mo mathvariant="normal">¯</mml:mo></mml:munder><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mspace linebreak="nobreak" width="1em"/><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo><mml:munder><mml:mn mathvariant="normal">3</mml:mn><mml:mo mathvariant="normal">¯</mml:mo></mml:munder><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>-</mml:mo><mml:munder><mml:mn mathvariant="normal">4</mml:mn><mml:mo mathvariant="normal">¯</mml:mo></mml:munder><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mspace linebreak="nobreak" width="1em"/><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo mathsize="2.0em">)</mml:mo><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:math></disp-formula>

          Adding on both sides

            <disp-formula id="App1.Ch1.S6.E69" content-type="numbered"><label>F11</label><mml:math id="M609" display="block"><mml:mtable rowspacing="0.2ex" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo mathsize="2.0em">(</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo mathsize="2.0em">)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle><mml:mo mathsize="2.0em">(</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo mathsize="2.0em">)</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

          gives

            <disp-formula id="App1.Ch1.S6.E70" content-type="numbered"><label>F12</label><mml:math id="M610" display="block"><mml:mrow><mml:mtable class="array" columnalign="left"><mml:mtr><mml:mtd><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mrow><mml:mi>n</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msubsup></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:munder><mml:mrow><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo mathsize="2.0em">(</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo mathsize="2.0em">)</mml:mo></mml:mrow><mml:mo mathvariant="normal">¯</mml:mo></mml:munder><mml:munder><mml:mrow><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo mathsize="2.0em">(</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo mathsize="2.0em">)</mml:mo></mml:mrow><mml:mo mathvariant="normal">¯</mml:mo></mml:munder><mml:mo>=</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo mathsize="2.0em">(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:munder><mml:mn mathvariant="normal">1</mml:mn><mml:mo mathvariant="normal">¯</mml:mo></mml:munder><mml:mo>-</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mspace width="1em" linebreak="nobreak"/><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>-</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:munder><mml:mn mathvariant="normal">1</mml:mn><mml:mo mathvariant="normal">¯</mml:mo></mml:munder><mml:mo>-</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo mathsize="2.0em">)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo mathsize="2.0em">(</mml:mo><mml:mo>(</mml:mo><mml:munder><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mo mathvariant="normal">¯</mml:mo></mml:munder><mml:mo>+</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mspace linebreak="nobreak" width="1em"/><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:munder><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow><mml:mo mathvariant="normal">¯</mml:mo></mml:munder><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mspace width="1em" linebreak="nobreak"/><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:munder><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mo mathvariant="normal">¯</mml:mo></mml:munder><mml:mo>+</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo mathsize="2.0em">)</mml:mo><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:math></disp-formula>

          Equation (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E70"/>) is the diagnostic discrete equation for the advection-diffusion equation of squared salinity, where the right-hand side shows the total discrete mixing, consisting of a discretisation of the physical mixing plus contributions from numerical mixing. To differentiate numerical and physical mixing, we split the right-hand side into a purely advective contribution (only containing <inline-formula><mml:math id="M611" display="inline"><mml:mrow><mml:mi>u</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M612" display="inline"><mml:mi mathvariant="italic">μ</mml:mi></mml:math></inline-formula>) and the remainder:

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displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo mathsize="2.0em">(</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo mathsize="2.0em">)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi 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linebreak="nobreak"/><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo mathsize="2.0em">(</mml:mo><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>+</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>+</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo mathsize="2.0em">)</mml:mo><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:math></disp-formula>

          Noting that

            <disp-formula id="App1.Ch1.S6.E72" content-type="numbered"><label>F14</label><mml:math id="M614" display="block"><mml:mrow><mml:mi mathvariant="italic">ν</mml:mi><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></disp-formula>

          and reformulating the purely advective term, we obtain

            <disp-formula id="App1.Ch1.S6.E73" content-type="numbered"><label>F15</label><mml:math id="M615" display="block"><mml:mrow><mml:mtable class="array" columnalign="left"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mrow><mml:mi>n</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msubsup></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo mathsize="2.0em">(</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo mathsize="2.0em">)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo mathsize="2.0em">(</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo mathsize="2.0em">)</mml:mo><mml:mo>=</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:munder><mml:mrow><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mo mathvariant="normal">¯</mml:mo></mml:munder><mml:mo mathsize="2.0em">(</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo mathsize="2.0em">)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo mathsize="2.0em">(</mml:mo><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>+</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo><mml:munder><mml:mn mathvariant="normal">2</mml:mn><mml:mo mathvariant="normal">¯</mml:mo></mml:munder><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:munder><mml:mn mathvariant="normal">2</mml:mn><mml:mo mathvariant="normal">¯</mml:mo></mml:munder><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>+</mml:mo><mml:munder><mml:mn mathvariant="normal">4</mml:mn><mml:mo mathvariant="normal">¯</mml:mo></mml:munder><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo><mml:munder><mml:mn mathvariant="normal">6</mml:mn><mml:mo mathvariant="normal">¯</mml:mo></mml:munder><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>+</mml:mo><mml:munder><mml:mn mathvariant="normal">2</mml:mn><mml:mo mathvariant="normal">¯</mml:mo></mml:munder><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo mathsize="2.0em">)</mml:mo><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:math></disp-formula>

          Now the right-hand side will be expressed as gradient-squared terms. This is simple for the advective term. For the diffusive term, we apply the following Ansatz to express it as a linear combination of the three possible discrete gradient-square terms:

            <disp-formula id="App1.Ch1.S6.E74" content-type="numbered"><label>F16</label><mml:math id="M616" display="block"><mml:mrow><mml:mtable class="array" columnalign="left"><mml:mtr><mml:mtd><mml:mrow><mml:mi>a</mml:mi><mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mi>b</mml:mi><mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mi>c</mml:mi><mml:msup><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo mathsize="2.0em">[</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:mi>a</mml:mi><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi>c</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:mfrac></mml:mstyle></mml:mstyle></mml:mrow></mml:mfenced><mml:mo>(</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:mi>a</mml:mi><mml:mo>+</mml:mo><mml:mi>b</mml:mi></mml:mrow></mml:mfenced><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:mi>b</mml:mi><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi>c</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:mfrac></mml:mstyle></mml:mstyle></mml:mrow></mml:mfenced><mml:mo>(</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi>a</mml:mi><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi>b</mml:mi><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi>c</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle></mml:mstyle><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo mathsize="2.0em">]</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:math></disp-formula>

          Comparison of coefficients results in

            <disp-formula id="App1.Ch1.S6.E75" content-type="numbered"><label>F17</label><mml:math id="M617" display="block"><mml:mtable class="array" columnalign="left left"><mml:mtr><mml:mtd><mml:mrow><mml:mi>a</mml:mi><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi>c</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>+</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mi>a</mml:mi><mml:mo>+</mml:mo><mml:mi>b</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>+</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mi>b</mml:mi><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi>c</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd><mml:mtd/></mml:mtr><mml:mtr><mml:mtd/><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi>a</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi>b</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo><mml:mn mathvariant="normal">6</mml:mn><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi>c</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd><mml:mtd/></mml:mtr></mml:mtable></mml:math></disp-formula>

          with the solution

            <disp-formula id="App1.Ch1.S6.E76" content-type="numbered"><label>F18</label><mml:math id="M618" display="block"><mml:mtable class="array" columnalign="left left"><mml:mtr><mml:mtd><mml:mrow><mml:mi>a</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>+</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mi>b</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>+</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mi>c</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:mtd><mml:mtd/></mml:mtr></mml:mtable></mml:math></disp-formula>

          With this, Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E73"/>) can be expressed as

            <disp-formula id="App1.Ch1.S6.E77" content-type="numbered"><label>F19</label><mml:math id="M619" display="block"><mml:mtable class="array" columnalign="left"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mrow><mml:mi>n</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msubsup></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo mathsize="2.0em">(</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo mathsize="2.0em">)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo mathsize="2.0em">(</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo mathsize="2.0em">)</mml:mo><mml:mo>=</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>-</mml:mo><mml:mi>u</mml:mi><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>)</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>+</mml:mo><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mo mathsize="2.0em">(</mml:mo><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>+</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>+</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo mathsize="2.0em">)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

          which can be reformulated as

            <disp-formula id="App1.Ch1.S6.E78" content-type="numbered"><label>F20</label><mml:math id="M620" display="block"><mml:mtable class="array" columnalign="left"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mrow><mml:mi>n</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msubsup></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo mathsize="2.0em">(</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo mathsize="2.0em">)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo mathsize="2.0em">(</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo mathsize="2.0em">)</mml:mo><mml:mo>=</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi>u</mml:mi><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>)</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mo mathsize="2.5em">[</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi mathvariant="italic">μ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>-</mml:mo><mml:mi mathvariant="italic">ν</mml:mi></mml:mrow></mml:mfenced><mml:msup><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>+</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">3</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle></mml:mstyle><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="italic">ν</mml:mi></mml:mrow></mml:mfenced><mml:msup><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>+</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">ν</mml:mi></mml:mrow></mml:mfenced><mml:msup><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo mathsize="2.5em">]</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

          and which is identical to Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E62"/>). It should be noted that for stationary problems (which must not depend on the time step <inline-formula><mml:math id="M621" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:math></inline-formula>) such as the discrete solution of the exponential estuary in Appendic <xref ref-type="sec" rid="App1.Ch1.S6.SS3"/>, the sum of all terms in Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E78"/>) containing one of the numerical parameters <inline-formula><mml:math id="M622" display="inline"><mml:mi mathvariant="italic">μ</mml:mi></mml:math></inline-formula> or <inline-formula><mml:math id="M623" display="inline"><mml:mi mathvariant="italic">ν</mml:mi></mml:math></inline-formula> is zero:

            <disp-formula id="App1.Ch1.S6.E79" content-type="numbered"><label>F21</label><mml:math id="M624" display="block"><mml:mtable class="array" columnalign="left"><mml:mtr><mml:mtd><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mfenced close="" open="{"><mml:mrow><mml:mo>(</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>)</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mfenced close="" open=""><mml:mrow><mml:mo>+</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:mo>-</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle></mml:mstyle><mml:mi mathvariant="italic">μ</mml:mi></mml:mrow></mml:mfenced><mml:msup><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mfenced close="}" open=""><mml:mrow><mml:mo>+</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:mo>-</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">3</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle></mml:mstyle><mml:mi mathvariant="italic">μ</mml:mi></mml:mrow></mml:mfenced><mml:msup><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mi>u</mml:mi><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle></mml:mstyle><mml:mfenced close=")" open="("><mml:mrow><mml:mo>-</mml:mo><mml:mi mathvariant="italic">μ</mml:mi></mml:mrow></mml:mfenced><mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula></p>

      <fig id="FF1" specific-use="star"><label>Figure F1</label><caption><p id="d2e23652">Analytical and numerical solutions for the one-dimensional stationary estuary with run-off velocity <inline-formula><mml:math id="M625" display="inline"><mml:mrow><mml:mi>u</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.05</mml:mn></mml:mrow></mml:math></inline-formula> m s<sup>−1</sup>, <inline-formula><mml:math id="M627" display="inline"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">500</mml:mn></mml:mrow></mml:math></inline-formula> m<sup>2</sup> s<sup>−1</sup>, <inline-formula><mml:math id="M630" display="inline"><mml:mrow><mml:mi>L</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">100</mml:mn></mml:mrow></mml:math></inline-formula> km and <inline-formula><mml:math id="M631" display="inline"><mml:mrow><mml:mi>A</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">10</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mn mathvariant="normal">000</mml:mn></mml:mrow></mml:math></inline-formula> m<sup>2</sup> (such that the run-off is <inline-formula><mml:math id="M633" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mi>u</mml:mi><mml:mi>A</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">500</mml:mn></mml:mrow></mml:math></inline-formula> m<sup>3</sup> s<sup>−1</sup> and the river salinity is <inline-formula><mml:math id="M636" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.4</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> g kg<sup>−1</sup>). The numerical solution is carried out for <inline-formula><mml:math id="M638" display="inline"><mml:mrow><mml:msub><mml:mi>i</mml:mi><mml:mo>max⁡</mml:mo></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:math></inline-formula> equidistant spatial increments of <inline-formula><mml:math id="M639" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi><mml:mo>=</mml:mo><mml:mi>L</mml:mi><mml:mo>/</mml:mo><mml:msub><mml:mi>i</mml:mi><mml:mo>max⁡</mml:mo></mml:msub></mml:mrow></mml:math></inline-formula>. <bold>(a)</bold> Analytical solution Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E81"/>) and numerical solution (bullets) for salinity <inline-formula><mml:math id="M640" display="inline"><mml:mi>s</mml:mi></mml:math></inline-formula> as function of non-dimensional estuarine length <inline-formula><mml:math id="M641" display="inline"><mml:mrow><mml:mi>x</mml:mi><mml:mo>/</mml:mo><mml:mi>L</mml:mi></mml:mrow></mml:math></inline-formula>. <bold>(b)</bold> Analytical solution Eq. (<xref ref-type="disp-formula" rid="Ch1.E33"/>) and numerical results for the salinity mixing per salinity class <inline-formula><mml:math id="M642" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>: Total mixing (squares), physical mixing <inline-formula><mml:math id="M643" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="double-struck">m</mml:mi><mml:mrow><mml:mi mathvariant="normal">phy</mml:mi><mml:mo>,</mml:mo><mml:mi>i</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> (bullets) and numerical mixing <inline-formula><mml:math id="M644" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="double-struck">m</mml:mi><mml:mrow><mml:mi mathvariant="normal">num</mml:mi><mml:mo>,</mml:mo><mml:mi>i</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> (circles). </p></caption>
          <graphic xlink:href="https://os.copernicus.org/articles/22/1875/2026/os-22-1875-2026-f20.png"/>

        </fig>

</sec>
<sec id="App1.Ch1.S6.SS3">
  <label>F3</label><title>One-dimensional stationary estuarine example</title>
      <p id="d2e23959">We demonstrate the distribution of physical and numerical mixing for a simple example of a one-dimensional stationary estuary of length <inline-formula><mml:math id="M645" display="inline"><mml:mi>L</mml:mi></mml:math></inline-formula> with constant cross-section <inline-formula><mml:math id="M646" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula> and constant discharge velocity <inline-formula><mml:math id="M647" display="inline"><mml:mrow><mml:mi>u</mml:mi><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula> (such that the river run-off is <inline-formula><mml:math id="M648" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mi>u</mml:mi><mml:mi>A</mml:mi></mml:mrow></mml:math></inline-formula>) and constant along-estuary diffusivity <inline-formula><mml:math id="M649" display="inline"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>, being slightly simplified from <xref ref-type="bibr" rid="bib1.bibx9" id="text.308"/>. Under those circumstances, the stationary form of Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E59"/>) describes the balance,

            <disp-formula id="App1.Ch1.S6.E80" content-type="numbered"><label>F22</label><mml:math id="M650" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mo>∂</mml:mo><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mfenced close=")" open="("><mml:mrow><mml:mi>u</mml:mi><mml:mi>s</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          of which the analytical solution for salinity is exponentially increasing from the river towards the ocean,

            <disp-formula id="App1.Ch1.S6.E81" content-type="numbered"><label>F23</label><mml:math id="M651" display="block"><mml:mrow><mml:mi>s</mml:mi><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">o</mml:mi></mml:msub><mml:mi>exp⁡</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>u</mml:mi><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>-</mml:mo><mml:mi>L</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          with the ocean salinity <inline-formula><mml:math id="M652" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">o</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> at <inline-formula><mml:math id="M653" display="inline"><mml:mrow><mml:mi>x</mml:mi><mml:mo>=</mml:mo><mml:mi>L</mml:mi></mml:mrow></mml:math></inline-formula> and the river salinity <inline-formula><mml:math id="M654" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">o</mml:mi></mml:msub><mml:mi>exp⁡</mml:mi><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mi>u</mml:mi><mml:mi>L</mml:mi><mml:mo>/</mml:mo><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> at <inline-formula><mml:math id="M655" display="inline"><mml:mrow><mml:mi>x</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>. The universal law of estuarine mixing Eq. (<xref ref-type="disp-formula" rid="Ch1.E33"/>) can be directly derived from Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E81"/>), see Appendix <xref ref-type="sec" rid="App1.Ch1.S6.SS4"/> for details.</p>
      <p id="d2e24198">The analytical solution Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E81"/>) and a numerical solution, obtained by iterating Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E61"/>) into a stationary state, are given in Fig. <xref ref-type="fig" rid="FF1"/>a. Using <inline-formula><mml:math id="M656" display="inline"><mml:mrow><mml:msub><mml:mi>i</mml:mi><mml:mo>max⁡</mml:mo></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:math></inline-formula> equidistant spatial increments results in a good numerical representation of the analytical solution with some deviations at high salinities. The universal law of estuarine mixing Eq. (<xref ref-type="disp-formula" rid="Ch1.E33"/>) is shown as analytical solution and numerical approximation in Fig. <xref ref-type="fig" rid="FF1"/>b. There, the numerically approximated physical mixing <inline-formula><mml:math id="M657" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="double-struck">m</mml:mi><mml:mrow><mml:mi mathvariant="normal">phy</mml:mi><mml:mo>,</mml:mo><mml:mi>i</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> and the numerical mixing <inline-formula><mml:math id="M658" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="double-struck">m</mml:mi><mml:mrow><mml:mi mathvariant="normal">num</mml:mi><mml:mo>,</mml:mo><mml:mi>i</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> are calculated as

            <disp-formula id="App1.Ch1.S6.E82" content-type="numbered"><label>F24</label><mml:math id="M659" display="block"><mml:mtable rowspacing="0.2ex" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mi mathvariant="double-struck">m</mml:mi><mml:mrow><mml:mi mathvariant="normal">phy</mml:mi><mml:mo>,</mml:mo><mml:mi>i</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mrow><mml:mi mathvariant="normal">s</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">phy</mml:mi><mml:mo>,</mml:mo><mml:mi>i</mml:mi></mml:mrow></mml:msub></mml:mrow><mml:mrow><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>)</mml:mo></mml:mrow></mml:mfrac></mml:mstyle><mml:mi>A</mml:mi><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mi mathvariant="double-struck">m</mml:mi><mml:mrow><mml:mi mathvariant="normal">num</mml:mi><mml:mo>,</mml:mo><mml:mi>i</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mrow><mml:mi mathvariant="normal">s</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">num</mml:mi><mml:mo>,</mml:mo><mml:mi>i</mml:mi></mml:mrow></mml:msub></mml:mrow><mml:mrow><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>)</mml:mo></mml:mrow></mml:mfrac></mml:mstyle><mml:mi>A</mml:mi><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

          with the total mixing <inline-formula><mml:math id="M660" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="double-struck">m</mml:mi><mml:mrow><mml:mi mathvariant="normal">tot</mml:mi><mml:mo>,</mml:mo><mml:mi>i</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> being the sum of the two. In Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E82"/>), the integration over a grid cell is carried out by multiplication with the grid box volume <inline-formula><mml:math id="M661" display="inline"><mml:mrow><mml:mi>A</mml:mi><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:math></inline-formula>. Note that the discrete salinity classes are not equidistant in salinity space here, but defined in terms of the stationary salinity distribution on the equidistant spatial grid such that the size of the salinity classes is <inline-formula><mml:math id="M662" display="inline"><mml:mrow><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mo>(</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:msubsup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. The numerical mixing amounts to about 12 % of the total mixing for this simple estuarine example with a small tidally averaged advection velocity (Fig. <xref ref-type="fig" rid="FF1"/>b). Clearly, the universal law of estuarine mixing Eq. (<xref ref-type="disp-formula" rid="Ch1.E33"/>) is only fulfilled when considering the total mixing consisting of physical and numerical mixing. Note that for this stationary solution, the results for mixing must not depend on the time step <inline-formula><mml:math id="M663" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:math></inline-formula>. It can indeed be shown that in this case the sum of all terms in <inline-formula><mml:math id="M664" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mrow><mml:mi mathvariant="normal">s</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">phy</mml:mi><mml:mo>,</mml:mo><mml:mi>i</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M665" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mrow><mml:mi mathvariant="normal">s</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">num</mml:mi><mml:mo>,</mml:mo><mml:mi>i</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> of Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E62"/>) containing the numerical parameters <inline-formula><mml:math id="M666" display="inline"><mml:mi mathvariant="italic">μ</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M667" display="inline"><mml:mi mathvariant="italic">ν</mml:mi></mml:math></inline-formula> is exactly zero, independently of <inline-formula><mml:math id="M668" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:math></inline-formula>, see Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E79"/>) of Appendix <xref ref-type="sec" rid="App1.Ch1.S6.SS2"/>. For a simulation of a realistic estuary using a high-resolution coastal ocean model, the relation of physical to numerical mixing per salinity class is shown in Fig. <xref ref-type="fig" rid="F8"/>, with the numerical mixing also being of the order of 10 % of the total mixing.</p>
</sec>
<sec id="App1.Ch1.S6.SS4">
  <label>F4</label><title>Analytical solution for salinity mixing per salinity class</title>
      <p id="d2e24592">Here, we derive the universal law of estuarine mixing directly from the analytical solution for the simple stationary one-dimensional estuary Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E81"/>). This solution differs slightly from the solution given by <xref ref-type="bibr" rid="bib1.bibx9" id="text.309"/>.  Inverting Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E81"/>) to resolve for <inline-formula><mml:math id="M669" display="inline"><mml:mi>x</mml:mi></mml:math></inline-formula> gives

            <disp-formula id="App1.Ch1.S6.E83" content-type="numbered"><label>F25</label><mml:math id="M670" display="block"><mml:mrow><mml:mi>x</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow><mml:mi>u</mml:mi></mml:mfrac></mml:mstyle><mml:mi>ln⁡</mml:mi><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>S</mml:mi><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">o</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mo>+</mml:mo><mml:mi>L</mml:mi></mml:mrow></mml:math></disp-formula>

          where <inline-formula><mml:math id="M671" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula> is now used as the salinity coordinate. The volume-integrated mixing <inline-formula><mml:math id="M672" display="inline"><mml:mrow><mml:mi>M</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> for the monotone salinity distribution Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E81"/>) can be calculated as the integral over the local mixing (using <inline-formula><mml:math id="M673" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula> as cross-sectional area),

            <disp-formula id="App1.Ch1.S6.E84" content-type="numbered"><label>F26</label><mml:math id="M674" display="block"><mml:mrow><mml:mi mathvariant="double-struck">M</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mi>A</mml:mi><mml:munderover><mml:mo movablelimits="false">∫</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mrow><mml:mi>x</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:munderover><mml:mn mathvariant="normal">2</mml:mn><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>s</mml:mi><mml:mo>(</mml:mo><mml:msup><mml:mi>x</mml:mi><mml:mo>′</mml:mo></mml:msup><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msup><mml:mi>x</mml:mi><mml:mo>′</mml:mo></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mtext>d</mml:mtext><mml:msup><mml:mi>x</mml:mi><mml:mo>′</mml:mo></mml:msup><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>

          Inserting the square of the <inline-formula><mml:math id="M675" display="inline"><mml:mi>x</mml:mi></mml:math></inline-formula>-derivative of Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E81"/>) into Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E84"/>) gives

            <disp-formula id="App1.Ch1.S6.E85" content-type="numbered"><label>F27</label><mml:math id="M676" display="block"><mml:mrow><mml:mtable class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:mi mathvariant="double-struck">M</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi>A</mml:mi><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">o</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msup><mml:mi>u</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:munderover><mml:mo movablelimits="false">∫</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mrow><mml:mi>x</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:munderover><mml:mi>exp⁡</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>u</mml:mi><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>(</mml:mo><mml:msup><mml:mi>x</mml:mi><mml:mo>′</mml:mo></mml:msup><mml:mo>-</mml:mo><mml:mi>L</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mfenced><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mtext>d</mml:mtext><mml:msup><mml:mi>x</mml:mi><mml:mo>′</mml:mo></mml:msup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:mi>A</mml:mi><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">o</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mi>u</mml:mi><mml:munderover><mml:mo movablelimits="false">∫</mml:mo><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mstyle scriptlevel="+1"><mml:mfrac><mml:mi>u</mml:mi><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mi>L</mml:mi></mml:mrow><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mstyle scriptlevel="+1"><mml:mfrac><mml:mi>u</mml:mi><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>-</mml:mo><mml:mi>L</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:munderover><mml:mi>exp⁡</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:msup><mml:mi>x</mml:mi><mml:mo>′</mml:mo></mml:msup></mml:mrow></mml:mfenced><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mtext>d</mml:mtext><mml:msup><mml:mi>x</mml:mi><mml:mo>′</mml:mo></mml:msup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">o</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mfenced open="(" close=")"><mml:mrow><mml:msup><mml:mi>exp⁡</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>u</mml:mi><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>-</mml:mo><mml:mi>L</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mfenced><mml:mo>-</mml:mo><mml:msup><mml:mi>exp⁡</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>u</mml:mi><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mi>L</mml:mi></mml:mrow></mml:mfenced></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">o</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mfenced open="(" close=")"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msup><mml:mi>S</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">o</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">r</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">o</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced><mml:mo>=</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub><mml:mfenced open="(" close=")"><mml:mrow><mml:msup><mml:mi>S</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">r</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:math></disp-formula>

          where Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E83"/>) and <inline-formula><mml:math id="M677" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mi>A</mml:mi><mml:mi>u</mml:mi></mml:mrow></mml:math></inline-formula> have been used. Finally, this yields the mixing per salinity class,

            <disp-formula id="App1.Ch1.S6.E86" content-type="numbered"><label>F28</label><mml:math id="M678" display="block"><mml:mrow><mml:mi mathvariant="double-struck">m</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi mathvariant="double-struck">M</mml:mi><mml:mo>(</mml:mo><mml:mi>S</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>S</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi>S</mml:mi><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          which is identical to Eq. (<xref ref-type="disp-formula" rid="Ch1.E33"/>). Following <xref ref-type="bibr" rid="bib1.bibx99" id="text.310"/>, and in analogy to their case of freshwater input across the ocean surface due to precipitation, the additional term <inline-formula><mml:math id="M679" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">r</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> in Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S6.E85"/>) represents the corresponding boundary flux of <inline-formula><mml:math id="M680" display="inline"><mml:mrow><mml:msup><mml:mi>S</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> at the river end and reduces the mixing in the interior.</p><table-wrap id="TF1a" specific-use="star"><label>Table F1</label><caption><p id="d2e25209">List of major variables including their physical meaning and dimensions.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Symbol</oasis:entry>
         <oasis:entry colname="col2">Meaning</oasis:entry>
         <oasis:entry colname="col3">Unit</oasis:entry>
         <oasis:entry colname="col4">Equation</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M681" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">area of transect or isohaline</oasis:entry>
         <oasis:entry colname="col3">m</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="App1.Ch1.S2.E48"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M682" display="inline"><mml:mrow><mml:msub><mml:mi>A</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">vertical eddy viscosity</oasis:entry>
         <oasis:entry colname="col3">m<sup>2</sup> s<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="App1.Ch1.S5.E54"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M685" display="inline"><mml:mi>b</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">buoyancy</oasis:entry>
         <oasis:entry colname="col3">m s<sup>−2</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E13"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M687" display="inline"><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Kolmogorov constant for scalar variance</oasis:entry>
         <oasis:entry colname="col3">–</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E41"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M688" display="inline"><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">longitudinal buoyancy gradient</oasis:entry>
         <oasis:entry colname="col3">s<sup>−2</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E13"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M690" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">vertical turbulent buoyancy flux</oasis:entry>
         <oasis:entry colname="col3">m<sup>2</sup> s<sup>−3</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="App1.Ch1.S5.E56"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M693" display="inline"><mml:mi>D</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">water depth</oasis:entry>
         <oasis:entry colname="col3">m</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E13"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M694" display="inline"><mml:mi>g</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">gravitational acceleration</oasis:entry>
         <oasis:entry colname="col3">m s<sup>−2</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="App1.Ch1.S5.E54"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M696" display="inline"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mi mathvariant="normal">dia</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">diahaline total salt transport</oasis:entry>
         <oasis:entry colname="col3">m<sup>3</sup> s<sup>−1</sup> (g kg<sup>−1</sup>)</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E30"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M700" display="inline"><mml:mrow><mml:msub><mml:mi>f</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">vertical total salinity flux</oasis:entry>
         <oasis:entry colname="col3">m s<sup>−1</sup> (g kg<sup>−1</sup>)</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E27"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M703" display="inline"><mml:mrow><mml:msub><mml:mi>J</mml:mi><mml:mi mathvariant="normal">dia</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">diahaline diffusive salt transport</oasis:entry>
         <oasis:entry colname="col3">m<sup>3</sup> s<sup>−1</sup> (g kg<sup>−1</sup>)</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E30"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M707" display="inline"><mml:mrow><mml:msub><mml:mi>j</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">vertical diahaline diffusive salinity flux</oasis:entry>
         <oasis:entry colname="col3">m s<sup>−1</sup> (g kg<sup>−1</sup>)</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E26"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M710" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">turbulent kinetic energy (TKE) per unit mass</oasis:entry>
         <oasis:entry colname="col3">m<sup>2</sup> s<sup>−2</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="App1.Ch1.S5.E54"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M713" display="inline"><mml:mi mathvariant="script">K</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">wave number</oasis:entry>
         <oasis:entry colname="col3">m<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E41"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M715" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="script">K</mml:mi><mml:mi mathvariant="italic">η</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Kolmogorov wave number</oasis:entry>
         <oasis:entry colname="col3">m<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E41"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M717" display="inline"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M718" display="inline"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">horizontal, vertical eddy diffusivity</oasis:entry>
         <oasis:entry colname="col3">m<sup>2</sup> s<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E7"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M721" display="inline"><mml:mrow><mml:msub><mml:mi>L</mml:mi><mml:mi mathvariant="normal">O</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Ozmidov scale</oasis:entry>
         <oasis:entry colname="col3">m</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E39"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M722" display="inline"><mml:mrow><mml:msub><mml:mi>L</mml:mi><mml:mi mathvariant="normal">T</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Thorpe scale</oasis:entry>
         <oasis:entry colname="col3">m</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E40"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M723" display="inline"><mml:mi>m</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">local salinity mixing per salinity class</oasis:entry>
         <oasis:entry colname="col3">m s<sup>−1</sup> (g kg<sup>−1</sup>)</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E28"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M726" display="inline"><mml:mi mathvariant="double-struck">m</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">salinity mixing per salinity class</oasis:entry>
         <oasis:entry colname="col3">m<sup>3</sup> s<sup>−1</sup> (g kg<sup>−1</sup>)</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E33"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M730" display="inline"><mml:mi mathvariant="double-struck">M</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">volume-integrated salinity mixing</oasis:entry>
         <oasis:entry colname="col3">m<sup>3</sup> s<sup>−1</sup> (g kg<sup>−1</sup>)<sup>2</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E19"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M735" display="inline"><mml:mi mathvariant="normal">Mc</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">salinity mixing completeness</oasis:entry>
         <oasis:entry colname="col3">–</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E25"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M736" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">buoyancy frequency</oasis:entry>
         <oasis:entry colname="col3">s<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="App1.Ch1.S5.E54"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M738" display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">shear production</oasis:entry>
         <oasis:entry colname="col3">m<sup>2</sup> s<sup>−3</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="App1.Ch1.S5.E56"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M741" display="inline"><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">stirring of micro-structure salinity variance (typically <inline-formula><mml:math id="M742" display="inline"><mml:mrow><mml:mo>=</mml:mo><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col3">m s<sup>−1</sup> (g kg<sup>−1</sup>)<sup>2</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E5"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M746" display="inline"><mml:mi>q</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Total Exchange Flow (TEF) of volume</oasis:entry>
         <oasis:entry colname="col3">m<sup>3</sup> s<sup>−1</sup> (g kg<sup>−1</sup>)<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E15"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M751" display="inline"><mml:mrow><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Total Exchange Flow (TEF) of salinity</oasis:entry>
         <oasis:entry colname="col3">m<sup>3</sup> s<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E15"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M754" display="inline"><mml:mrow><mml:msub><mml:mi>q</mml:mi><mml:mrow><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Total Exchange Flow (TEF) of squared salinity</oasis:entry>
         <oasis:entry colname="col3">m<sup>3</sup> s<sup>−1</sup> (g kg<sup>−1</sup>)</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E15"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M758" display="inline"><mml:mi>Q</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">estuarine circulation streamfunction</oasis:entry>
         <oasis:entry colname="col3">m<sup>3</sup> s<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E14"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M761" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">dia</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">inflow volume transport across isohaline</oasis:entry>
         <oasis:entry colname="col3">m<sup>3</sup> s<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E30"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M764" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">in</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">volume transport across isohaline</oasis:entry>
         <oasis:entry colname="col3">m<sup>3</sup> s<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E31"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M767" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">out</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">outflow volume transport across isohaline</oasis:entry>
         <oasis:entry colname="col3">m<sup>3</sup> s<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E31"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M770" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">inflow volume transport</oasis:entry>
         <oasis:entry colname="col3">m<sup>3</sup> s<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E16"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M773" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:mi mathvariant="normal">s</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">in</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">inflowing salt transport</oasis:entry>
         <oasis:entry colname="col3">m<sup>3</sup> s<sup>−1</sup> (g kg<sup>−1</sup>)</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E16"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M777" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>,</mml:mo><mml:mi mathvariant="normal">in</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">inflowing salt squared transport</oasis:entry>
         <oasis:entry colname="col3">m<sup>3</sup> s<sup>−1</sup> (g kg<sup>−1</sup>)<sup>2</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E16"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M782" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">outflow volume transport</oasis:entry>
         <oasis:entry colname="col3">m<sup>3</sup> s<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E16"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M785" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:mi mathvariant="normal">s</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">out</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">outflowing salt transport</oasis:entry>
         <oasis:entry colname="col3">m<sup>3</sup> s<sup>−1</sup> (g kg<sup>−1</sup>)</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E16"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M789" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>,</mml:mo><mml:mi mathvariant="normal">out</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">outflowing salt squared transport</oasis:entry>
         <oasis:entry colname="col3">m<sup>3</sup> s<sup>−1</sup> (g kg<sup>−1</sup>)<sup>2</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E16"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M794" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">river discharge</oasis:entry>
         <oasis:entry colname="col3">m<sup>3</sup> s<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E18"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M797" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">estuarine circulation streamfunction for salinity</oasis:entry>
         <oasis:entry colname="col3">m<sup>3</sup> s<sup>−1</sup> (g kg<sup>−1</sup>)</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E14"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M801" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">estuarine circulation streamfunction for squared salinity</oasis:entry>
         <oasis:entry colname="col3">m<sup>3</sup> s<sup>−1</sup> (g kg<sup>−1</sup>)<sup>2</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E14"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M806" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">surf</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">surface freshwater transport</oasis:entry>
         <oasis:entry colname="col3">m<sup>3</sup> s<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E24"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M809" display="inline"><mml:mi mathvariant="normal">Rf</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">flux Richardson number</oasis:entry>
         <oasis:entry colname="col3">–</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E38"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M810" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Rf</mml:mi><mml:mi mathvariant="normal">st</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">steady-state flux Richardson number</oasis:entry>
         <oasis:entry colname="col3">–</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="App1.Ch1.S5.E58"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M811" display="inline"><mml:mrow><mml:mi>R</mml:mi><mml:mi>i</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">gradient Richardson number</oasis:entry>
         <oasis:entry colname="col3">–</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="App1.Ch1.S5.E55"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M812" display="inline"><mml:mrow><mml:mi>R</mml:mi><mml:msub><mml:mi>i</mml:mi><mml:mi mathvariant="normal">st</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">steady-state gradient Richardson number</oasis:entry>
         <oasis:entry colname="col3">–</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="App1.Ch1.S5.E57"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M813" display="inline"><mml:mi>s</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">salinity</oasis:entry>
         <oasis:entry colname="col3">g kg<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E1"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M815" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">salinity coordinate</oasis:entry>
         <oasis:entry colname="col3">g kg<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E32"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M817" display="inline"><mml:mrow><mml:mi>S</mml:mi><mml:mi>i</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Simpson number</oasis:entry>
         <oasis:entry colname="col3">–</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E13"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M818" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">inflow salinity</oasis:entry>
         <oasis:entry colname="col3">g kg<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E17"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M820" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msub><mml:mo>)</mml:mo><mml:mi mathvariant="normal">in</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">inflowing squared salinity</oasis:entry>
         <oasis:entry colname="col3">(g kg<sup>−1</sup>)<sup>2</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E17"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M823" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">out</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">outflow salinity</oasis:entry>
         <oasis:entry colname="col3">g kg<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E17"/>)</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<table-wrap id="TF1b" specific-use="star"><label>Table F1</label><caption><p id="d2e27576">Continued.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Symbol</oasis:entry>
         <oasis:entry colname="col2">Meaning</oasis:entry>
         <oasis:entry colname="col3">Unit</oasis:entry>
         <oasis:entry colname="col4">Equation</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M825" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msup><mml:mi>s</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msub><mml:mo>)</mml:mo><mml:mi mathvariant="normal">out</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">outflowing squared salinity</oasis:entry>
         <oasis:entry colname="col3">(g kg<sup>−1</sup>)<sup>2</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E17"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M828" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">river salinity</oasis:entry>
         <oasis:entry colname="col3">g kg<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E23"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M830" display="inline"><mml:mrow><mml:msub><mml:mi>S</mml:mi><mml:mi mathvariant="normal">ss</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">power spectral density of salinity variance</oasis:entry>
         <oasis:entry colname="col3">m (g kg<sup>−1</sup>)<sup>2</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E41"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M833" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">surf</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">representative surface salinity</oasis:entry>
         <oasis:entry colname="col3">g kg<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E24"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M835" display="inline"><mml:mrow><mml:msub><mml:mi>S</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">shear frequency</oasis:entry>
         <oasis:entry colname="col3">s<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="App1.Ch1.S5.E56"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M837" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">time coordinate</oasis:entry>
         <oasis:entry colname="col3">s</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E2"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M838" display="inline"><mml:mrow><mml:mi>u</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi>u</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M839" display="inline"><mml:mrow><mml:mi>v</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi>u</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M840" display="inline"><mml:mrow><mml:mi>w</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi>u</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">eastward, northward and upward velocity component</oasis:entry>
         <oasis:entry colname="col3">m s<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E2"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M842" display="inline"><mml:mrow><mml:msub><mml:mi>u</mml:mi><mml:mrow><mml:mi mathvariant="normal">dia</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">upward diahaline entrainment velocity</oasis:entry>
         <oasis:entry colname="col3">m s<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E26"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M844" display="inline"><mml:mrow><mml:msub><mml:mi>u</mml:mi><mml:mo>*</mml:mo></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">bottom friction velocity</oasis:entry>
         <oasis:entry colname="col3">m s<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E13"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M846" display="inline"><mml:mi mathvariant="double-struck">v</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">volume per salinity class</oasis:entry>
         <oasis:entry colname="col3">m<sup>3</sup> (g kg<sup>−1</sup>)<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E35"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M850" display="inline"><mml:mi>V</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">estuarine volume (bounded by transect or isohaline)</oasis:entry>
         <oasis:entry colname="col3">m<sup>3</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="App1.Ch1.S2.E48"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M852" display="inline"><mml:mrow><mml:mi>x</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M853" display="inline"><mml:mrow><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M854" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">eastward, northward and upward coordinate</oasis:entry>
         <oasis:entry colname="col3">m</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E2"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M855" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi>N</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">buoyancy number</oasis:entry>
         <oasis:entry colname="col3">–</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="App1.Ch1.S5.E54"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M856" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">micro-structure salinity variance decay (typically <inline-formula><mml:math id="M857" display="inline"><mml:mrow><mml:mo>=</mml:mo><mml:msub><mml:mi>P</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col3">m s<sup>−1</sup> (g kg<sup>−1</sup>)<sup>2</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E1"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M861" display="inline"><mml:mi mathvariant="italic">η</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">sea surface elevation</oasis:entry>
         <oasis:entry colname="col3">m</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E12"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M862" display="inline"><mml:mi mathvariant="italic">ε</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">dissipation rate of TKE</oasis:entry>
         <oasis:entry colname="col3">m<sup>2</sup> s<sup>−3</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E38"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M865" display="inline"><mml:mi mathvariant="normal">Γ</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">mixing efficiency</oasis:entry>
         <oasis:entry colname="col3">–</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="App1.Ch1.S5.E58"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M866" display="inline"><mml:mi mathvariant="italic">κ</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">molecular diffusivity of salinity</oasis:entry>
         <oasis:entry colname="col3">m<sup>2</sup> s<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E1"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M869" display="inline"><mml:mi mathvariant="italic">μ</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Courant number</oasis:entry>
         <oasis:entry colname="col3">–</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="App1.Ch1.S6.E62"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M870" display="inline"><mml:mi mathvariant="italic">ν</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">diffusion number</oasis:entry>
         <oasis:entry colname="col3">–</oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="App1.Ch1.S6.E62"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M871" display="inline"><mml:mi mathvariant="italic">ρ</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">potential density</oasis:entry>
         <oasis:entry colname="col3">kg m<sup>−3</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E13"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M873" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">reference density</oasis:entry>
         <oasis:entry colname="col3">kg m<sup>−3</sup></oasis:entry>
         <oasis:entry colname="col4">(<xref ref-type="disp-formula" rid="Ch1.E13"/>)</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<table-wrap id="TF2" specific-use="star"><label>Table F2</label><caption><p id="d2e28486">List of operators demonstrated for an arbitrary variable <inline-formula><mml:math id="M875" display="inline"><mml:mi>x</mml:mi></mml:math></inline-formula>.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="2">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Operator</oasis:entry>
         <oasis:entry colname="col2">Meaning</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M876" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo mathvariant="normal">ˇ</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mo>[</mml:mo><mml:mi>x</mml:mi><mml:mo>]</mml:mo><mml:mo>+</mml:mo><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">instantaneous variable, not Reynolds-averaged</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M877" display="inline"><mml:mrow><mml:mo>[</mml:mo><mml:mi>x</mml:mi><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Reynolds-averaged variable</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M878" display="inline"><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">turbulent fluctuation of variable</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M879" display="inline"><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo mathvariant="normal">¯</mml:mo></mml:mover></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">volume-averaged or vertically averaged variable</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M880" display="inline"><mml:mrow><mml:msup><mml:msup><mml:mi>x</mml:mi><mml:mo>′</mml:mo></mml:msup><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mo>(</mml:mo><mml:mi>x</mml:mi><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo mathvariant="normal">¯</mml:mo></mml:mover><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">local variance of variable</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M881" display="inline"><mml:mrow><mml:mo>〈</mml:mo><mml:mi>x</mml:mi><mml:mo>〉</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">temporal average in <inline-formula><mml:math id="M882" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> coordinates</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M883" display="inline"><mml:mrow><mml:mo>〈</mml:mo><mml:mi>x</mml:mi><mml:msub><mml:mo>〉</mml:mo><mml:mi>S</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">temporal average in <inline-formula><mml:math id="M884" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula> coordinates</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>


</sec>
</app>
  </app-group><notes notes-type="codeavailability"><title>Code availability</title>

      <p id="d2e28708">The used GETM source code is archived at <ext-link xlink:href="https://doi.org/10.5281/zenodo.7741730" ext-link-type="DOI">10.5281/zenodo.7741730</ext-link> <xref ref-type="bibr" rid="bib1.bibx73" id="paren.311"/>.</p>
  </notes><notes notes-type="dataavailability"><title>Data availability</title>

      <p id="d2e28720">The Elbe model data and the Python scripts used for the creation of the corresponding figures are archived at <ext-link xlink:href="https://doi.org/10.5281/zenodo.20305994" ext-link-type="DOI">10.5281/zenodo.20305994</ext-link> <xref ref-type="bibr" rid="bib1.bibx89" id="paren.312"/>.</p>
  </notes><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d2e28732">HB and WRG developed the first ideas, aims and structure for this review paper. HB wrote most of the text and designed the explanatory sketches. WRG wrote the Observations Sect. <xref ref-type="sec" rid="Ch1.S5.SS1"/> and parts of the Introduction Sect. <xref ref-type="sec" rid="Ch1.S1"/> and the Mixing processes Sect. <xref ref-type="sec" rid="Ch1.S4"/>. LR wrote the Appendix <xref ref-type="sec" rid="App1.Ch1.S3"/> on the Elbe River estuary simulations and KK wrote the derivation for the Coordinate transformation in Appendix <xref ref-type="sec" rid="App1.Ch1.S4"/>. Furthermore, KK checked all mathematical equations and derivations in detail. XL performed the Elbe River estuary model simulations for this review paper and LR and XL carried out the model analysis and the Elbe figures. WRG and KK implemented major changes to the structure of the manuscript. Finally, all authors reviewed, edited and corrected the entire manuscript in detail.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d2e28748">The contact author has declared that none of the authors has any competing interests.</p>
  </notes><notes notes-type="disclaimer"><title>Disclaimer</title>

      <p id="d2e28754">Publisher's note: Copernicus Publications remains neutral with regard to jurisdictional claims made in the text, published maps, institutional affiliations, or any other geographical representation in this paper. The authors bear the ultimate responsibility for providing appropriate place names. Views expressed in the text are those of the authors and do not necessarily reflect the views of the publisher.</p>
  </notes><notes notes-type="sistatement"><title>Special issue statement</title>

      <p id="d2e28760">This article is part of the special issue “Ocean Science Jubilee: reviews and perspectives”. It is not associated with a conference.</p>
  </notes><ack><title>Acknowledgements</title><p id="d2e28767">The work of H. Burchard and K. Klingbeil is a contribution to the Collaborative Research Centre TRR 181 <italic>Energy Transfers in Atmosphere and Ocean</italic> (No. 274762653), funded by the German Research Foundation. We further acknowledge funding for X. Li by grant no. 03F0954F of the German Federal Ministry of Research, Technology and Space (BMFTR) as part of the DAM mission “mareXtreme”, project ElbeXtreme and for L. Reese by grant no. 03F0980B of the German Federal Ministry of Research, Technology and Space (BMFTR) as part of the DAM mission “sustainMare”, project CoastalFutures II. The authors are grateful for the useful comments and recommendations by Tobias Kukulka (University of Maryland, USA), Qing Li (The Hong Kong University of Science and Technology, Guangzhou, China) and Parker MacCready (University of Washington, USA). We further thank Robert Hetland (Pacific Northwest National Laboratory, USA), John Huthnance (National Oceanography Centre, UK) and an anonymous referee for their critical reviews of our original version of the manuscript.</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d2e28775">This research has been supported by the Deutsche Forschungsgemeinschaft (grant no. TRR181) and the Bundesministerium für Forschung und Technologie (grant nos. 03F0980B and 03F0954F).</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d2e28781">This paper was edited by John M. Huthnance and reviewed by Robert Hetland and one anonymous referee.</p>
  </notes><ref-list>
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