<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD Journal Publishing with OASIS Tables v3.0 20080202//EN" "journalpub-oasis3.dtd">
<article xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:oasis="http://docs.oasis-open.org/ns/oasis-exchange/table" xml:lang="en" dtd-version="3.0" article-type="research-article"><?xmltex \makeatother\@nolinetrue\makeatletter?><?xmltex \bartext{Research article}?>
  <front>
    <journal-meta><journal-id journal-id-type="publisher">OS</journal-id><journal-title-group>
    <journal-title>Ocean Science</journal-title>
    <abbrev-journal-title abbrev-type="publisher">OS</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Ocean Sci.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1812-0792</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/os-19-469-2023</article-id><title-group><article-title>Multiple mechanisms for chlorophyll <inline-formula><mml:math id="M1" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration variations <?xmltex \hack{\break}?>in coastal
upwelling regions: a case study east of Hainan Island <?xmltex \hack{\break}?>in the South China Sea</article-title><alt-title>Multiple mechanisms for chlorophyll <inline-formula><mml:math id="M2" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration variations</alt-title>
      </title-group><?xmltex \runningtitle{Multiple mechanisms for chlorophyll $a$ concentration variations}?><?xmltex \runningauthor{J.~Li et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff2 aff3">
          <name><surname>Li</surname><given-names>Junyi</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Li</surname><given-names>Min</given-names></name>
          <email>min_li@gdou.edu.cn</email>
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Wang</surname><given-names>Chao</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff4">
          <name><surname>Zheng</surname><given-names>Quanan</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Xu</surname><given-names>Ying</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Zhang</surname><given-names>Tianyu</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Xie</surname><given-names>Lingling</given-names></name>
          <email>xiell@gdou.edu.cn</email>
        </contrib>
        <aff id="aff1"><label>1</label><institution>College of Ocean and Meteorology, Laboratory of Coastal Ocean Variation and Disaster Prediction,<?xmltex \hack{\break}?>
Guangdong Ocean University, Zhanjiang, China</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>College of Ocean and Meteorology, Key Laboratory of Climate,
Sources and Environments<?xmltex \hack{\break}?> in Continent Shelf Sea and Deep Ocean, Zhanjiang,
China</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Key Laboratory of Space Ocean Remote Sensing and Application,
MNR, Beijing, China</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>Department of Atmospheric and Oceanic Science, University of Maryland,
College Park, MD, USA</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Min Li (min_li@gdou.edu.cn) and  Lingling Xie
(xiell@gdou.edu.cn)</corresp></author-notes><pub-date><day>17</day><month>April</month><year>2023</year></pub-date>
      
      <volume>19</volume>
      <issue>2</issue>
      <fpage>469</fpage><lpage>484</lpage>
      <history>
        <date date-type="received"><day>22</day><month>September</month><year>2022</year></date>
           <date date-type="rev-request"><day>30</day><month>September</month><year>2022</year></date>
           <date date-type="rev-recd"><day>10</day><month>March</month><year>2023</year></date>
           <date date-type="accepted"><day>16</day><month>March</month><year>2023</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2023 </copyright-statement>
        <copyright-year>2023</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://os.copernicus.org/articles/.html">This article is available from https://os.copernicus.org/articles/.html</self-uri><self-uri xlink:href="https://os.copernicus.org/articles/.pdf">The full text article is available as a PDF file from https://os.copernicus.org/articles/.pdf</self-uri>
      <abstract><title>Abstract</title>

      <p id="d1e181">Using satellite observations from 2003 to 2020 and cruise
observations from 2019 and 2021, this study reveals an unexpected minor role
of upwelling in seasonal and interannual variations in chlorophyll <inline-formula><mml:math id="M3" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> (Chl <inline-formula><mml:math id="M4" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>)
concentrations in the coastal upwelling region east of Hainan Island (UEH)
in the northwestern South China Sea (NWSCS). The results show strong
seasonal and interannual variability in the Chl <inline-formula><mml:math id="M5" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in the core
upwelling area of the UEH. Different from the strongest upwelling in summer,
the Chl <inline-formula><mml:math id="M6" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in the UEH area reaches a maximum of 1.18 mg m<inline-formula><mml:math id="M7" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
in autumn and winter, with a minimum value of 0.74 mg m<inline-formula><mml:math id="M8" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in summer.
The Chl <inline-formula><mml:math id="M9" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in summer increases to as high as 1.0 mg m<inline-formula><mml:math id="M10" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> with
weak upwelling, whereas the maximum Chl <inline-formula><mml:math id="M11" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in October increases
to 2.5 mg m<inline-formula><mml:math id="M12" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. The analysis of environmental factors shows that,
compared to the limited effects of upwelling, the along-shelf coastal
current from the northern shelf and the increased precipitation are
crucially important to the Chl <inline-formula><mml:math id="M13" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration variation in the study area.
These results provide new insights for predicting marine productivity in
upwelling areas, i.e., multiple mechanisms, especially horizontal advection,
should be considered in addition to the upwelling process.</p>
  </abstract>
    
<funding-group>
<award-group id="gs1">
<funding-source>National Natural Science Foundation of China</funding-source>
<award-id>41476009</award-id>
<award-id>41506018</award-id>
<award-id>41976200</award-id>
<award-id>41706025</award-id>
</award-group>
</funding-group>
</article-meta>
  </front>
<body>
      

      <?xmltex \hack{\newpage}?>
<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d1e293">The oceanic area with coastal upwelling is generally characterized by high
productivity; it occupies only 1 % of the total area of the ocean but
provides more than 50 % of the total marine fish harvest (Barua, 2005).
High levels of biological productivity strongly influence atmosphere–ocean
carbon recycling (Mcgregor et al., 2007; Xu et al., 2020). Therefore,
revealing the variation in chlorophyll <inline-formula><mml:math id="M14" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> (Chl <inline-formula><mml:math id="M15" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>) in coastal upwelling areas is
important to the overall health of the marine ecosystem and climate.</p>
      <p id="d1e310">The upward movement of seawater may carry nutrients from the lower layer and
support a high surface Chl <inline-formula><mml:math id="M16" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration. Thus, the variability in Chl <inline-formula><mml:math id="M17" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>
concentrations in coastal upwelling regions is proposed to be associated
with that of upwelling (Jing et al., 2009). Alongshore winds, positive wind
curl, tidal mixing, and topography may affect upwelling processes (Hu and
Wang, 2016). In contrast, other oceanic and atmospheric processes, such as
mesoscale eddies, sub-mesoscale fronts, precipitation, and typhoon processes,
can also induce Chl <inline-formula><mml:math id="M18" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> increments (Aoki et al., 2019; Cape et al., 2019; Li et
al., 2021a, b).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1"><?xmltex \currentcnt{1}?><?xmltex \def\figurename{Figure}?><label>Figure 1</label><caption><p id="d1e336">Study area (black square) and sampling sites. <bold>(a)</bold> Climatological (June–August) sea surface temperature (SST) and
<bold>(b)</bold> Chl <inline-formula><mml:math id="M19" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration during 2003–2020. In <bold>(a)</bold>, the
dotted white curve is the SST front for June–August; the red curve is the
29<inline-formula><mml:math id="M20" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> isotherm. In <bold>(b)</bold>, the dots are the observation sites
for the cruise during 14–15 July 2021 (black) and 2–3 October 2019
(yellow), and the red curve is the altimeter satellite ground track (Track
114). The unit of the numbers on the isobaths is meters.</p></caption>
        <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://os.copernicus.org/articles/19/469/2023/os-19-469-2023-f01.png"/>

      </fig>

      <p id="d1e375">The coastal upwelling east of Hainan Island (UEH) is part of the seasonal
upwelling in the northwestern South China Sea (NWSCS). As shown in Fig. 1,
the isobaths in the shelf are parallel to the continental coastline. The
width of the continental shelf is approximately 100 km. Outside of<?pagebreak page470?> the
continental shelf, there is a steep slope linking the shelf to the South
China Sea (SCS) basin. The circulation in the coastal area east of Hainan
Island (HEC) is controlled by the East Asian monsoon system. In summer, the
coastal current travels northeastward on the shelf influenced by the
southwesterly monsoon, whereas in winter, the current flows southwestward
(Ding et al., 2018; Jing et al., 2015). According to the Ekman transport
theory, the along-shelf wind induces cross-shelf transport of the surface
water and thus causes coastal upwelling along the coastline in summer. The
UEH generally begins in April, becomes strongest in July and August, and
remains until September (Xie et al., 2012). The UEH is located in coastal
shallow water less than 100 m deep (Jing et al., 2015). Wind-stress-curl-induced
Ekman pumping is considered to be another crucial factor for UEH generation
(Xu et al., 2020). In addition, the strong northeastward current along the
shelf could cause strong stratification towards the coast and thus enhance
upwelling (Su et al., 2013).</p>
      <p id="d1e378">The variation in primary production in the HEC has been variously reported.
Deng et al. (1995) reported that phytoplankton achieved a maximum value in a
strong period of UEH. Jing et al. (2011) found a higher Chl <inline-formula><mml:math id="M21" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in
summer 1998, as the offshore Ekman transport was the strongest.
Southwesterly monsoon-induced coastal upwelling is suggested to be the major
mechanism for the relatively high summertime phytoplankton biomass and
primary production (Liu et al., 2013; Song et al., 2012). Moreover, Hu et al. (2021) found that eddy processes could strengthen phytoplankton blooms
in the HEC. The variation in the basin circulation may also affect the UEH
(Su et al., 2013; Wang et al., 2006). However, Ning et al. (2004) reported
poor nutrients, low Chl <inline-formula><mml:math id="M22" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>, and weak primary production in summer in the HEC.
Shi et al. (2021) found that the largest Chl <inline-formula><mml:math id="M23" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> increase in the HEC occurs in
May when upwelling is weak. Li et al. (2021a) further showed that the
maximum Chl <inline-formula><mml:math id="M24" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration year-round exhibits a double peak in March and
October.</p>
      <p id="d1e409">The results of previous studies indicate that upwelling may not be the most
significant factor affecting primary productivity in the HEC (Li et al.,
2021a; Ning et al., 2004). The mechanism driving the variation in primary
productivity in the HEC thus needs further investigation.</p>
      <p id="d1e412">The objective of this study is to reveal the role of upwelling in the
spatial and temporal variations in Chl <inline-formula><mml:math id="M25" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentrations in the HEC area based on
multi-sensor satellite observations and in situ cruise observations. The
article is organized as follows. Section 2 describes the materials and
methods, including the algorithms used for retrieval of the total suspended
sediment (TSS) and sea surface temperature (SST) from satellite
observations. Section 3 presents the results and variations in environmental
factors and an analysis of the spatial and temporal variations in the Chl <inline-formula><mml:math id="M26" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>
concentration in the study area. Section 4 discusses the role of typhoons,
coastal currents, El Niño–Southern Oscillation (ENSO) events, and
precipitation in the Chl <inline-formula><mml:math id="M27" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration. Section 5 presents the conclusions.</p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Materials and methods</title>
<sec id="Ch1.S2.SS1">
  <label>2.1</label><title>Study area and upwelling area</title>
      <p id="d1e451">The study area (enclosed by the black square in Fig. 1) covers the UEH
area off the northeastern coast of Hainan Island. It is adjacent to the
narrow Qiongzhou Strait in the west and adjoins the wide continental shelf
of the NWSCS in the east. The Wanquan River flowing through the east of Hainan
Island is the third largest river on Hainan Island. The East Asian monsoon
prevails in the HEC, and the UEH appears along the coast in summer (Lin et
al., 2016). In fall and winter, a southwestward current flows along the
coast on the whole shelf (Ding et al., 2018; Li et al., 2016). The nutrients
in the Pearl River runoff can be transported to the HEC area by the
Guangdong Coastal Current (GDCC). The thermal fronts stretch along the
continental shelf (dotted white curve in Fig. 1a) and are accompanied by
relatively high Chl <inline-formula><mml:math id="M28" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentrations in HEC (Fig. 1b).</p>
</sec>
<sec id="Ch1.S2.SS2">
  <label>2.2</label><title>Satellite observations and retrieval</title>
      <?pagebreak page471?><p id="d1e469">The monthly ocean color elements (Kd490, Rrs645, Chl <inline-formula><mml:math id="M29" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>, SST, and
photosynthetically active radiation (PAR)) were obtained by moderate-resolution imaging spectroradiometer (MODIS) instruments on board the Terra
and Aqua satellites. The dataset from 2003 to 2020 is a level-3 product with
a spatial resolution of 4 km. The data from the two platforms were merged to
improve the coverage of the Chl <inline-formula><mml:math id="M30" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration (Li et al., 2021b). The TSS
concentration was estimated from the Rrs645 product as follows (Li et al., 2021b):
            <disp-formula id="Ch1.E1" content-type="numbered"><label>1</label><mml:math id="M31" display="block"><mml:mrow><mml:msub><mml:mi>C</mml:mi><mml:mi mathvariant="normal">TSS</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.6455</mml:mn><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1455.7</mml:mn><mml:mo>×</mml:mo><mml:mtext>Rrs</mml:mtext><mml:mn mathvariant="normal">645</mml:mn><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
          The euphotic depth retrieval from the Kd490 product was conducted as follows
(Zhao et al., 2013):
            <disp-formula id="Ch1.E2" content-type="numbered"><label>2</label><mml:math id="M32" display="block"><mml:mrow><mml:msub><mml:mi>Z</mml:mi><mml:mi mathvariant="normal">eu</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.28</mml:mn><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mn mathvariant="normal">395.92</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">0.0092</mml:mn></mml:mrow><mml:mrow><mml:mn mathvariant="normal">0.0092</mml:mn><mml:mo>+</mml:mo><mml:mtext>Kd</mml:mtext><mml:mn mathvariant="normal">490</mml:mn></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
          The surface thermal front was estimated using the SST gradient. The SST
gradient was calculated using the zonal and meridional components (GSST<inline-formula><mml:math id="M33" display="inline"><mml:msub><mml:mi/><mml:mi>x</mml:mi></mml:msub></mml:math></inline-formula>,
GSST<inline-formula><mml:math id="M34" display="inline"><mml:msub><mml:mi/><mml:mi>y</mml:mi></mml:msub></mml:math></inline-formula>) as follows:
            <disp-formula id="Ch1.E3" content-type="numbered"><label>3</label><mml:math id="M35" display="block"><mml:mrow><mml:mtext>GSST</mml:mtext><mml:mo>=</mml:mo><mml:msqrt><mml:mrow><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mtext>GSST</mml:mtext><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mtext>GSST</mml:mtext><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:msqrt><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where GSST<inline-formula><mml:math id="M36" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mrow><mml:msub><mml:mi>x</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mfenced close=")" open="("><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msub><mml:mtext>SST</mml:mtext><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mtext>SST</mml:mtext><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>x</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M37" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C km<inline-formula><mml:math id="M38" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>), and (<inline-formula><mml:math id="M39" display="inline"><mml:mrow><mml:msub><mml:mi>x</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is equal to twice the
spatial resolution.</p>
      <p id="d1e721">The sea surface wind (SSW) at 10 m above the sea surface, with a spatial
resolution of 0.25<inline-formula><mml:math id="M40" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>, was obtained from the Copernicus Marine
Service (CMEMS; Hersbach et al., 2018). The wind data are a subset from the
fifth-generation European Centre for Medium-Range Weather Forecasts (ECMWF)
atmospheric reanalysis of the global climate covering the period from
January 1950 to present. The data from 2002 to 2020 used in this study were
a monthly product.</p>
      <p id="d1e733">A cross-shelf and along-shelf coordinate system for the SSW vector is given
by

                <disp-formula specific-use="gather" content-type="numbered"><mml:math id="M41" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E4"><mml:mtd><mml:mtext>4</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msub><mml:mi>u</mml:mi><mml:mi mathvariant="normal">along</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mi>u</mml:mi><mml:mtext>cos</mml:mtext><mml:mi mathvariant="italic">θ</mml:mi><mml:mo>-</mml:mo><mml:mi>v</mml:mi><mml:mi>sin⁡</mml:mi><mml:mi mathvariant="italic">θ</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E5"><mml:mtd><mml:mtext>5</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi>v</mml:mi><mml:mi mathvariant="normal">cross</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mi>u</mml:mi><mml:mi>sin⁡</mml:mi><mml:mi mathvariant="italic">θ</mml:mi><mml:mo>+</mml:mo><mml:mi>v</mml:mi><mml:mi>cos⁡</mml:mi><mml:mi mathvariant="italic">θ</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

            where the cross-shelf wind, <inline-formula><mml:math id="M42" display="inline"><mml:mrow><mml:msub><mml:mi>v</mml:mi><mml:mtext>cross</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, is seaward positive; the along-shelf
wind, <inline-formula><mml:math id="M43" display="inline"><mml:mrow><mml:mi>u</mml:mi><mml:mtext>along</mml:mtext></mml:mrow></mml:math></inline-formula>, is northward parallel to the coastline; <inline-formula><mml:math id="M44" display="inline"><mml:mi mathvariant="italic">θ</mml:mi></mml:math></inline-formula> is the
angle between the shoreline and the north direction (25<inline-formula><mml:math id="M45" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> in this
study); and (<inline-formula><mml:math id="M46" display="inline"><mml:mi>u</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M47" display="inline"><mml:mrow><mml:mi>v</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> are the east and north components of the SSW.</p>
      <p id="d1e857">The wind stress is determined as
            <disp-formula id="Ch1.E6" content-type="numbered"><label>6</label><mml:math id="M48" display="block"><mml:mrow><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub><mml:msub><mml:mi>C</mml:mi><mml:mi mathvariant="normal">D</mml:mi></mml:msub><mml:mi>U</mml:mi><mml:mfenced close="|" open="|"><mml:mi>U</mml:mi></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where <inline-formula><mml:math id="M49" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mtext>a</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M50" display="inline"><mml:mrow><mml:msub><mml:mi>C</mml:mi><mml:mtext>D</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M51" display="inline"><mml:mi>U</mml:mi></mml:math></inline-formula> are air density, drag coefficient, and sea
surface wind; <inline-formula><mml:math id="M52" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mtext>a</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.29</mml:mn></mml:mrow></mml:math></inline-formula> kg m<inline-formula><mml:math id="M53" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>; <inline-formula><mml:math id="M54" display="inline"><mml:mrow><mml:msub><mml:mi>C</mml:mi><mml:mtext>D</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">0.75</mml:mn><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.067</mml:mn><mml:mi>U</mml:mi><mml:mo>)</mml:mo><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> (Garratt, 1977). Moreover, wind stress
curl is obtained by <inline-formula><mml:math id="M55" display="inline"><mml:mrow><mml:mi mathvariant="normal">∇</mml:mi><mml:mo>×</mml:mo><mml:mi mathvariant="italic">τ</mml:mi></mml:mrow></mml:math></inline-formula>.</p>
      <p id="d1e992">The monthly sea surface salinity (SSS) data from 2018 to 2020, with a spatial
resolution of 0.25<inline-formula><mml:math id="M56" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>, were obtained from the CMEMS.</p>
      <p id="d1e1004">The daily rainfall rate during 2003–2020 was obtained from the
multi-satellite precipitation analysis dataset of the Tropical Rainfall
Measuring Mission (TRMM). The monthly data, with a spatial resolution of
0.25<inline-formula><mml:math id="M57" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>, were calculated from the daily global rainfall data.</p>
      <p id="d1e1016">The satellite altimeter along-track sea level anomaly (SLA) data from 2003
to 2020 were obtained from the CMEMS. The Jason-1, Jason-2, and Jason-3
satellites repeat their ground tracks every 9.9 d. Their sampling frequency
is 1 Hz, and their spatial resolution is approximately 7 km. The five-point
moving average was applied to the along-track SLA data to filter out the
small-scale ocean processes. As the coastline is almost perpendicular to
ground track 114 of the altimeter satellites (Fig. 1b), the along-shelf
geostrophic current was estimated from the along-track SLA data as follows:
            <disp-formula id="Ch1.E7" content-type="numbered"><label>7</label><mml:math id="M58" display="block"><mml:mrow><mml:mi>u</mml:mi><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>g</mml:mi><mml:mi>f</mml:mi></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi mathvariant="italic">η</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where <inline-formula><mml:math id="M59" display="inline"><mml:mi>g</mml:mi></mml:math></inline-formula> is the acceleration due to gravity, <inline-formula><mml:math id="M60" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula> is the Coriolis parameter, and  <inline-formula><mml:math id="M61" display="inline"><mml:mi mathvariant="italic">η</mml:mi></mml:math></inline-formula> is the SLA.</p>
      <p id="d1e1070">The typhoon track data were downloaded from the Tropical Cyclone Data Center
of the China Meteorological Administration (CMA). The dataset contains
6-hourly tracks and intensity analyses of typhoons that occurred in the
western North Pacific from 2003 to 2020.</p>
</sec>
<sec id="Ch1.S2.SS3">
  <label>2.3</label><title>Shipboard sections</title>
      <p id="d1e1081">Two shipboard sections were investigated during 2–3 October 2019 and 14–15 July 2021 (yellow and black points in Fig. 1b). At each station, the
temperature, salinity, and fluorescence profiles were collected using a
Sea-Bird 911plus conductivity–temperature–depth (CTD) system. The Chl <inline-formula><mml:math id="M62" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> data
from the fluorescence sensor of the CTD were not calibrated, and the signals
of interest were clear.</p>
</sec>
<sec id="Ch1.S2.SS4">
  <label>2.4</label><title>Mapping the upwelling</title>
      <p id="d1e1099">The thermal fronts (Fig. 1a) of the climatological SST in summer stretched
along the 29 <inline-formula><mml:math id="M63" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C isotherm. Thus, we defined the upwelling domain,
i.e., core upwelling, as the area where the SST was lower than 29 <inline-formula><mml:math id="M64" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C in the summer. The time series of the core upwelling area was calculated
for each year during 2003–2020. Then the time series of the Chl <inline-formula><mml:math id="M65" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>
concentration in the core upwelling area for each year was obtained.</p>
      <p id="d1e1127">The upwelling index (UI) based on the wind stress is as follows:
            <disp-formula id="Ch1.E8" content-type="numbered"><label>8</label><mml:math id="M66" display="block"><mml:mrow><mml:msub><mml:mi>M</mml:mi><mml:mi>x</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mi>f</mml:mi><mml:mi mathvariant="italic">ρ</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where <inline-formula><mml:math id="M67" display="inline"><mml:mrow><mml:mi mathvariant="italic">ρ</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula>1025 kg m<inline-formula><mml:math id="M68" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> is the water density, <inline-formula><mml:math id="M69" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula> is the Coriolis
parameter, <inline-formula><mml:math id="M70" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the along-shelf wind stress, and <inline-formula><mml:math id="M71" display="inline"><mml:mrow><mml:msub><mml:mi>M</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the
cross-transport.</p>
</sec>
<sec id="Ch1.S2.SS5">
  <label>2.5</label><title>Empirical orthogonal function</title>
      <p id="d1e1221">Empirical orthogonal function (EOF) is a useful tool and is widely applied to
reduce the dimensionality of climate data (North et al., 1982). EOF analysis
is used to determine the dominant patterns of Chl <inline-formula><mml:math id="M72" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> in the study area. The
Chl <inline-formula><mml:math id="M73" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> data are prepared as an anomaly in the form of matrix, <inline-formula><mml:math id="M74" display="inline"><mml:mi mathvariant="bold">X</mml:mi></mml:math></inline-formula>. Decomposition
is applied by <inline-formula><mml:math id="M75" display="inline"><mml:mrow><mml:mi>B</mml:mi><mml:mo>⋅</mml:mo><mml:mi>E</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="bold">X</mml:mi></mml:mrow></mml:math></inline-formula>. EOF modes (i.e., <inline-formula><mml:math id="M76" display="inline"><mml:mi>E</mml:mi></mml:math></inline-formula>, spatial patterns)
and their corresponding principal components (i.e., <inline-formula><mml:math id="M77" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula>, temporal
coefficients) could be obtained by decomposition of the anomaly matrix. The
EOF patterns and the principal components are independent.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2" specific-use="star"><?xmltex \currentcnt{2}?><?xmltex \def\figurename{Figure}?><label>Figure 2</label><caption><p id="d1e1278">Monthly climatological <bold>(a)</bold> sea surface wind and
wind stress curl, <bold>(b)</bold> rainfall and PAR, <bold>(c)</bold> SST and SSS,
and <bold>(d)</bold> euphotic depth, Chl <inline-formula><mml:math id="M78" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>, and TSS in the study area. The error
bar indicates the standard deviation (STD). The shaded area indicates the
upwelling season.</p></caption>
          <?xmltex \igopts{width=327.206693pt}?><graphic xlink:href="https://os.copernicus.org/articles/19/469/2023/os-19-469-2023-f02.png"/>

        </fig>

</sec>
</sec>
<?pagebreak page472?><sec id="Ch1.S3">
  <label>3</label><title>Results</title>
<sec id="Ch1.S3.SS1">
  <label>3.1</label><title>Temporal and spatial variations of environmental factors in the HEC</title>
      <p id="d1e1322">Figure 2 shows the climatological monthly variations of the environmental
factors in the study area. As shown in Fig. 2a, the mean along-shelf
component of the SSW is positive from May to September, with the strongest
value of 2.5 m s<inline-formula><mml:math id="M79" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> occurring in June. In the rest of the months, the
along-shelf components of the SSW and wind stress curl are negative. The
cross-shelf component of the SSW is also negative. The changes in the wind
direction show that the study area is mainly controlled by the Asian
monsoon. The period of UEH is coherent with that of the positive along-shelf
wind and the wind stress curl from May to September (green shading in
Fig. 2a–d), indicating the effects of SSW and wind stress curl on
coastal upwelling.</p>
      <p id="d1e1337">The rainfall in the study area increases monotonically from February to
October and peaks in October with a value of 0.37 mm h<inline-formula><mml:math id="M80" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (Fig. 2b).
After October, the rainfall decreases rapidly to 0.10 mm h<inline-formula><mml:math id="M81" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in
November. The rainfall in winter (December, January, and February) was less
than 0.10 mm h<inline-formula><mml:math id="M82" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. Differently from the rainfall, the mean
photosynthetically active radiation (PAR) in the study area reaches its
maximum value of 50 mol m<inline-formula><mml:math id="M83" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> d<inline-formula><mml:math id="M84" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in May, indicating its dependence
on the annual movement of the sun. The monthly climatological distribution
of the SST is similar to that of the PAR, while the highest (lowest) SSS
occurred in March<?pagebreak page473?> (October and November) following the amount of rainfall
(Fig. 2c).</p>
      <p id="d1e1400">For the euphotic depth, the average values in the study area are greater
than 50 m all year around and reach 70 m in the months of March to October
(Fig. 2d). In contrast, the TSS concentration is less than 1.0 mg L<inline-formula><mml:math id="M85" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
from January to September and reaches the highest value of 1.5 g L<inline-formula><mml:math id="M86" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in December. Similar to the TSS, the mean Chl <inline-formula><mml:math id="M87" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in the study
area has smaller values of less than 0.3 mg m<inline-formula><mml:math id="M88" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> from March to
September, although the UEH occurs in the summer months (green shading in
Fig. 2).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3" specific-use="star"><?xmltex \currentcnt{3}?><?xmltex \def\figurename{Figure}?><label>Figure 3</label><caption><p id="d1e1449">Seasonal climatological <bold>(a1–a4)</bold> PAR,<bold> (b1–b4)</bold> rainfall, <bold>(c1–c4)</bold> SST, <bold>(d1–d4)</bold> euphotic depth,
<bold>(e1–e4)</bold> TSS, and <bold>(f1–f4)</bold> Chl <inline-formula><mml:math id="M89" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>. The columns correspond to
winter, spring, summer, and autumn. The unit of the numbers on the isobaths
is meters.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://os.copernicus.org/articles/19/469/2023/os-19-469-2023-f03.png"/>

        </fig>

      <p id="d1e1484">Figure 3 shows the spatial distributions of seasonal climatological
environmental parameters. The PAR is almost homogeneous in the study area
(Fig. 3a). The values are approximately 20–30 mol m<inline-formula><mml:math id="M90" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> d<inline-formula><mml:math id="M91" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in
winter, reach 50 mol m<inline-formula><mml:math id="M92" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> d<inline-formula><mml:math id="M93" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in the spring and summer, and then
decrease to approximately 30–40 mol m<inline-formula><mml:math id="M94" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> d<inline-formula><mml:math id="M95" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in autumn.</p>
      <p id="d1e1560">The rainfall rate is less than 5 mm h<inline-formula><mml:math id="M96" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in winter (Fig. 3b). In
spring and summer, the rainfall peaks in Hainan Island, while the high-precipitation area is located on Hainan Island and in the HEC area in
autumn. The rainfall rate is as high as 10 mm h<inline-formula><mml:math id="M97" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in summer and autumn.
Furthermore, as the high-precipitation area is located on land, the heavy
rain is transformed into runoff, which carries nutrients into the sea. Thus,
the temporal and spatial variations in the rainfall rate likely induce
variations in the input of terrestrial materials.</p>
      <p id="d1e1587">The SST exhibits remarkable seasonal variability (Fig. 3c). Generally, the
SST is high in spring and summer and low in winter and autumn. Moreover, the
SST is lower in coastal waters than in ocean areas in winter and spring,
which is modulated by the prevailing southwestward current along the
coastline of Guangdong (Ding et al., 2018). In summer, a region identified
by low SST (<inline-formula><mml:math id="M98" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">29</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M99" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C) values, i.e., the UEH, is observed to
the northeast of Hainan Island.</p>
      <p id="d1e1609">The spatial distribution of the euphotic depth is consistent with the
bathymetric distribution (Fig. 3d). The euphotic depth in spring and
summer is approximately 20–30 m within water depths of less than 50 m,
whereas it is approximately 100 m in the deeper water. In winter and autumn,
the euphotic depth is 20–30 m within water depths of less than 70 m.
Moreover, the euphotic depth decreases to 60–80 m in the deeper water. As
the latitude of the study area is low, the illumination is not the limiting
factor. These variations in the euphotic depth likely affect the vertical
distribution of phytoplankton in the water.</p>
      <p id="d1e1612">Similarly, the TSS concentration is higher in the coastal area and lower in
the ocean area (Fig. 3e). Moreover, the TSS concentration is less than 0.3 mg L<inline-formula><mml:math id="M100" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in spring and summer in the HEC area. However, the TSS
concentration increases to 3.0 mg L<inline-formula><mml:math id="M101" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> at water depths of less than 70 m
in autumn and winter.</p>
      <p id="d1e1640">The Chl <inline-formula><mml:math id="M102" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration is higher in the coastal area than in the open-ocean
area (Fig. 3f). In winter and autumn, the Chl <inline-formula><mml:math id="M103" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration is higher than
1.0 mg m<inline-formula><mml:math id="M104" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in water shallower than 70 m. In spring, the concentration
decreases to 0.5 mg m<inline-formula><mml:math id="M105" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. However, the Chl <inline-formula><mml:math id="M106" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration decreases to
approximately 0.3 mg m<inline-formula><mml:math id="M107" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in summer. In addition, the high concentration
is approximately 1.0 mg m<inline-formula><mml:math id="M108" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in the nearshore area with water depths
less than 20 m.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4"><?xmltex \currentcnt{4}?><?xmltex \def\figurename{Figure}?><label>Figure 4</label><caption><p id="d1e1715">Time series of upwelling index (UI) and upwelling
characteristics. <bold>(a)</bold> Time series of mean sea surface wind UI and
wind stress curl in HEC region. The dotted blue curve denotes the mean UI during
June–August; the dotted red curve is mean wind stress curl during
June–August; and the blue and red curves are the trends of the UI and wind
stress curl, respectively. <bold>(b)</bold> Time series of upwelling area and
SST. The green bar denotes the area of UEH region. The dotted red and black curves
denote mean SST of the UEH region and the slope region (depth <inline-formula><mml:math id="M109" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">200</mml:mn></mml:mrow></mml:math></inline-formula> m) in
HEC, respectively. The green, red, and black lines are the trends of the
upwelling area and the mean SST in UEH and slope area, respectively.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://os.copernicus.org/articles/19/469/2023/os-19-469-2023-f04.png"/>

        </fig>

</sec>
<sec id="Ch1.S3.SS2">
  <label>3.2</label><title>Variabilities in upwelling</title>
      <p id="d1e1748">The UI derived from the wind stress and wind stress curl in the HEC are
shown in Fig. 4. The results reveal that the wind UI decreased from 2003
to 2013 and increased from 2014 to 2020, probably due to the phase switching
of the Pacific Decadal Oscillation (PDO) in 2014 (Qin et al., 2018).
Overall, the wind UI associated with alongshore wind stress exhibited an
increasing trend from 2003 to 2020. Moreover, the wind stress curl exhibited
a weak increasing trend from 2003 to 2020 in the study area.</p>
      <p id="d1e1751">The time series of the area and SST of UEH are shown in Fig. 4b. The upwelling
area exhibited a downward trend from 2003 to 2020. Moreover, the mean SST in
UEH exhibited an increasing trend. Though the statistical confidence is less
significant due to limited data length (only 18 years), the trends of both
the area (<inline-formula><mml:math id="M110" display="inline"><mml:mo lspace="0mm">-</mml:mo></mml:math></inline-formula>129 km<inline-formula><mml:math id="M111" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math id="M112" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and mean SST (0.007 <inline-formula><mml:math id="M113" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C yr<inline-formula><mml:math id="M114" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> indicate that the UEH gradually weakened from 2003 to 2020.
However, we checked the mean SST of the background (<inline-formula><mml:math id="M115" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">200</mml:mn></mml:mrow></mml:math></inline-formula> m in HEC;
black curve in Fig. 4b). It shows that the background SST increases much
faster than that in UEH. Therefore, we conclude that the upwelling is
enhanced by the stronger wind stress and curl in relation to the background of SST
becoming stronger.</p>
      <p id="d1e1820">The time series of UEH area and UI exhibit interannual variations. High UI
and wind stress curl values occurred in 2005, 2008, 2012, 2015, and 2018,
which coincided with the large areas of upwelling in these years. Low UI
values occurred in 2004, 2006, and 2009, which coincided with the small areas
of upwelling in these years.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><?xmltex \currentcnt{1}?><label>Table 1</label><caption><p id="d1e1827">Climatologically seasonal mean of the Chl <inline-formula><mml:math id="M116" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in
the UEH.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="6">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:colspec colnum="5" colname="col5" align="left"/>
     <oasis:colspec colnum="6" colname="col6" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Period</oasis:entry>
         <oasis:entry colname="col2">Winter</oasis:entry>
         <oasis:entry colname="col3">Spring</oasis:entry>
         <oasis:entry colname="col4">Summer</oasis:entry>
         <oasis:entry colname="col5">Autumn</oasis:entry>
         <oasis:entry colname="col6">Annual mean</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Value</oasis:entry>
         <oasis:entry colname="col2">1.08 <inline-formula><mml:math id="M117" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.24</oasis:entry>
         <oasis:entry colname="col3">0.82 <inline-formula><mml:math id="M118" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.44</oasis:entry>
         <oasis:entry colname="col4">0.74 <inline-formula><mml:math id="M119" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.06</oasis:entry>
         <oasis:entry colname="col5">1.18 <inline-formula><mml:math id="M120" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.23</oasis:entry>
         <oasis:entry colname="col6">0.96 <inline-formula><mml:math id="M121" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.27</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><?xmltex \gdef\@currentlabel{1}?></table-wrap>

</sec>
<sec id="Ch1.S3.SS3">
  <label>3.3</label><?xmltex \opttitle{Variabilities in Chl~$a$ concentration in the UEH}?><title>Variabilities in Chl <inline-formula><mml:math id="M122" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in the UEH</title>
      <p id="d1e1956">The time series of the spatial mean of the Chl <inline-formula><mml:math id="M123" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in the UEH is
shown in Fig. 5. The Chl <inline-formula><mml:math id="M124" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration is unexpectedly low from April to
September, i.e., the upwelling season (as shown in Fig. 5a–b). The
climatological mean Chl <inline-formula><mml:math id="M125" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration is the lowest in summer ( 0.74 mg m<inline-formula><mml:math id="M126" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, as shown in Fig. 5b and Table 1), which indicates the relatively
limited effect of upwelling on the Chl <inline-formula><mml:math id="M127" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in the HEC. On the
other hand, the mean Chl <inline-formula><mml:math id="M128" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in the UEH is highest in autumn (1.18 mg m<inline-formula><mml:math id="M129" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and almost twice as high as that in summer. In October, the
mean Chl <inline-formula><mml:math id="M130" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration reaches 1.4 mg m<inline-formula><mml:math id="M131" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>.</p>
      <?pagebreak page474?><p id="d1e2041">The interannual variations of the spatial mean of the Chl <inline-formula><mml:math id="M132" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in
UEH are also shown in Fig. 5. The Chl <inline-formula><mml:math id="M133" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in the UEH was high in
2003, 2006–2007, 2009–2010, 2013, 2016, and 2019. The Chl <inline-formula><mml:math id="M134" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentrations in
these years were 2–4 times (ranging from 1.0 to 1.8 mg m<inline-formula><mml:math id="M135" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> those in
the other years (2005, 2008, 2011–2012, and 2018). In the remaining years,
the Chl <inline-formula><mml:math id="M136" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration is only approximately 0.5 mg m<inline-formula><mml:math id="M137" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in summer, which
is much less than the yearly mean value. In 2018, there were minima for both
wind UI and Chl <inline-formula><mml:math id="M138" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>. However, the maximum of wind stress curl existed in
2018, which was the leading factor for the upwelling process (as shown in
Fig. 4a).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5" specific-use="star"><?xmltex \currentcnt{5}?><?xmltex \def\figurename{Figure}?><label>Figure 5</label><caption><p id="d1e2109">Time series of <bold>(a)</bold> the spatial mean of the
Chl <inline-formula><mml:math id="M139" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in the upwelling area, <bold>(b)</bold> the monthly
climatological mean Chl <inline-formula><mml:math id="M140" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>, and <bold>(c)</bold> the seasonal mean Chl <inline-formula><mml:math id="M141" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and wind UI. The
red shading indicates the upwelling season from April to September.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://os.copernicus.org/articles/19/469/2023/os-19-469-2023-f05.png"/>

        </fig>

      <?pagebreak page475?><p id="d1e2150">Comparing the time series of Chl <inline-formula><mml:math id="M142" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration shown in Fig. 5 to the time
series of upwelling characteristics, one can see that low UI values coincide
with high Chl <inline-formula><mml:math id="M143" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in the UEH in most years and vice versa. The
correlation coefficient between wind UI and Chl <inline-formula><mml:math id="M144" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration during
2003–2012 is <inline-formula><mml:math id="M145" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.3</mml:mn></mml:mrow></mml:math></inline-formula>, which shows a negative relationship. The main reason for
the negative relationship is the low background SST during 2003–2012. It is
known that high UI values indicate strong upwelling in the HEC. This means
that upwelling is not favorable for Chl <inline-formula><mml:math id="M146" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> bloom in the UEH. Moreover, one can
see that the Chl <inline-formula><mml:math id="M147" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration is unexpectedly low in the upwelling season,
as shown in Fig. 5. Therefore, the results provide new insight into the
relationship between marine productivity and upwelling in the UEH. However,
the effect of environmental factors and spatial variations on the Chl <inline-formula><mml:math id="M148" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>
concentration needs further investigation.</p>
      <p id="d1e2206">As the PDO phase changed after 2014, the wind UI and Chl <inline-formula><mml:math id="M149" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration seem
to be positively correlated with each other. There was a strong ENSO event in
2015–2016 and a strong wind stress curl in 2018. A high wind UI and wind
stress curl occurred in 2015–2016 combined with a high Chl <inline-formula><mml:math id="M150" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration. In
2018, though there was a weak wind UI, the strong wind stress curl still
induced a strong upwelling process, as shown in Fig. 4. However, a low
Chl <inline-formula><mml:math id="M151" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration occurred in UHE in 2018 (Fig. 5c). This further confirms
the limited effects of upwelling on Chl <inline-formula><mml:math id="M152" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> in the study area. The environmental
factors need to be further investigated.</p>
</sec>
<sec id="Ch1.S3.SS4">
  <label>3.4</label><?xmltex \opttitle{EOF analysis of Chl~$a$ concentration}?><title>EOF analysis of Chl <inline-formula><mml:math id="M153" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration</title>
      <p id="d1e2253">To further reveal the variations in the Chl <inline-formula><mml:math id="M154" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in the HEC, the
EOF analysis results are shown in Figs. 6–7. The first four EOF modes of
the Chl <inline-formula><mml:math id="M155" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration explain 60 % of the total variance (Fig. 6). Mode 1 includes an enhanced signal in the coastal waters (<inline-formula><mml:math id="M156" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">60</mml:mn></mml:mrow></mml:math></inline-formula> m) to the
east of Hainan Island. The magnitude of the variability is generally the
same throughout the other areas. The corresponding temporal evolution
(Fig. 7a) is characterized by strong seasonal cycles, with peaks in
October and troughs in May. The climatological mean of the corresponding
temporal evolution is negative from April to September and positive from
October to March. The negative phase with a large amplitude lasts for 6
months. Therefore, the Chl <inline-formula><mml:math id="M157" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration is persistently low from April to
September. Mode 1 is characterized by the GDCC (Ding et al., 2018). Mode 2
separates the east and northeast coastal waters of Hainan Island. The
troughs of the temporal evolution of Mode 2 occur in September and October.
The climatological mean peaks in January and December. The strong signals
occur in September and October to the east of Hainan Island, which indicates
that the Chl <inline-formula><mml:math id="M158" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration is controlled by rainfall (as shown in Fig. 3b). The other strong signals occur in January and December. Moreover, they
are located on the north shelf of the SCS, adjacent to the Qiongzhou Strait
to the west. Thus, the result suggests that Chl <inline-formula><mml:math id="M159" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration is affected by
the GDCC.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6"><?xmltex \currentcnt{6}?><?xmltex \def\figurename{Figure}?><label>Figure 6</label><caption><p id="d1e2304">Spatial distributions of the first four EOFs for the
Chl <inline-formula><mml:math id="M160" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration. The variance explained by each mode is labeled.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://os.copernicus.org/articles/19/469/2023/os-19-469-2023-f06.png"/>

        </fig>

      <p id="d1e2320">Mode 3 describes 5 % of the total variance in the Chl <inline-formula><mml:math id="M161" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in the
coastal regions of Hainan Island. Mode 3 also separates the east and
northeast coastal waters of Hainan Island (Fig. 6c). However, the
climatological mean of the temporal evolution is positive between June and
August. Therefore, the positive phase occurs in summer, revealing an
upwelling area to the east and north of Hainan Island. Mode 4 contributes
only 4 % of the total variance. The climatological mean of the temporal
evolution exhibits strong peaks in July and weak peaks in April, i.e.,
semiannual variability. High Chl <inline-formula><mml:math id="M162" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentrations occur in the northeast
coastal waters of Hainan Island during the upwelling season.</p>
      <p id="d1e2338">Modes 3 and 4 both describe the upwelling phenomenon along the northeast
coast of Hainan Island during summer. The spread of upwelling can be seen
clearly in the EOFs of the Chl <inline-formula><mml:math id="M163" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in the areas with water depths
of less than 100 m along the coastline. However, upwelling described less
than 10 % of the total variance in the Chl <inline-formula><mml:math id="M164" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration, indicating that
the contribution of upwelling to productivity in the HEC is limited.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7" specific-use="star"><?xmltex \currentcnt{7}?><?xmltex \def\figurename{Figure}?><label>Figure 7</label><caption><p id="d1e2357"><bold>(a–d)</bold> Time series and <bold>(e–h)</bold> climatological
mean of the first four EOFs for the Chl <inline-formula><mml:math id="M165" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://os.copernicus.org/articles/19/469/2023/os-19-469-2023-f07.png"/>

        </fig>

<?xmltex \hack{\newpage}?>
</sec>
<?pagebreak page476?><sec id="Ch1.S3.SS5">
  <label>3.5</label><?xmltex \opttitle{Vertical distribution of the Chl~$a$ concentration based on observation data}?><title>Vertical distribution of the Chl <inline-formula><mml:math id="M166" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration based on observation data</title>
      <p id="d1e2397">To examine the vertical distribution of the Chl <inline-formula><mml:math id="M167" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in the HEC,
two cruise measurement sections are used in this study. Figure 8 shows the
oceanographic cruise data collected on 14–15 July 2021 and 2–3 October 2019, illustrating the distribution of the Chl <inline-formula><mml:math id="M168" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in summer and
autumn, respectively. The pronounced upwelling can be seen on the
cross-shelf section observed in July 2021. Both the isotherm and isohaline
on the shelf are uplifted toward the shore by upwelling-induced movement. A
temperature front can be seen near the sea surface, which is located
approximately 50 km away from the coastline (depths of <inline-formula><mml:math id="M169" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">90</mml:mn></mml:mrow></mml:math></inline-formula> m). The thermal fronts are reported by Jing et al. (2016). The fronts
induced by upwelling tend to be approximately aligned with the 20–100 m
isobath. The high Chl <inline-formula><mml:math id="M170" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration layer is also uplifted from 80 to 40 m
by upwelling, and the Chl <inline-formula><mml:math id="M171" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration is as high as 1.2 mg m<inline-formula><mml:math id="M172" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>.</p>
      <p id="d1e2451">From 2–3 October 2019, the sea surface temperature front disappeared. Jing
et al. (2016) found that the front was the weakest in autumn. However, a
salinity front occurs approximately 60 km from the coastline in the sea
surface. This salinity front indicates that fresh water is injected into the
sea surface. Figures 2b, 3b, and 4 show that the rainfall is strong during
autumn. The rainfall is input into the sea surface via rainfall and runoff.
Thus, the salinity front is generated. In contrast to the upwelling in
summer, downwelling occurs in the bottom water and is associated with
downwelling-favorable wind forcing. Moreover, abundant Chl <inline-formula><mml:math id="M173" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> is detected at a
depth of 30 m on the shelf, which is shallower than the detection depth in
summer, since the euphotic depth is shallower in autumn, as shown in Fig. 3d.</p>

      <?xmltex \floatpos{p}?><fig id="Ch1.F8" specific-use="star"><?xmltex \currentcnt{8}?><?xmltex \def\figurename{Figure}?><label>Figure 8</label><caption><p id="d1e2463">Oceanographic cruise data collected on <bold>(a–d)</bold> 14–15 July 2021 and <bold>(e–h)</bold> 2–3 October 2019: <bold>(a)</bold> and
<bold>(e)</bold> temperature distributions; <bold>(b)</bold> and <bold>(f)</bold> salinity distributions; <bold>(c)</bold> and <bold>(g)</bold> potential density
distributions; and <bold>(d)</bold> and <bold>(h)</bold> Chl <inline-formula><mml:math id="M174" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> distributions. The
arrows indicate the location of the temperature and salinity front near the sea
surface. The white circle is a diagrammatic sketch for upwelling and
downwelling circulation.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://os.copernicus.org/articles/19/469/2023/os-19-469-2023-f08.png"/>

        </fig>

</sec>
</sec>
<sec id="Ch1.S4">
  <label>4</label><title>Discussion</title>
<sec id="Ch1.S4.SS1">
  <label>4.1</label><title>Relationship with typhoon events</title>
      <p id="d1e2527">In the NWSCS, the Chl <inline-formula><mml:math id="M175" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration can be affected by different factors,
e.g., typhoons. Typhoon-induced upwelling occasionally occurs in the SCS (Ma
et al., 2021; Wang et al., 2020). In the shelf areas, typhoon-enhanced
vertical mixing and upwelling play dominant roles in the spatiotemporal
behavior of the Chl <inline-formula><mml:math id="M176" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration (Li et al., 2021a, b). The
upwelling transports nutrients into the euphotic zone, which supports
Chl <inline-formula><mml:math id="M177" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> blooms (Ye et al., 2013; Zheng et al., 2021). An increase in the Chl <inline-formula><mml:math id="M178" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>
concentration in the nearshore<?pagebreak page477?> region off Hainan Island followed typhoon
rainfall, with mixing and upwelling effects (Zheng and Tang, 2007). The
large-scale peripheral wind vector resulted in the accumulation and
enhancement of the Chl <inline-formula><mml:math id="M179" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in the nearshore area (Liu et al.,
2020). An offshore bloom produced a Chl <inline-formula><mml:math id="M180" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> peak (4 mg m<inline-formula><mml:math id="M181" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> after the
typhoon's passage (Zheng and Tang, 2007). These observations illustrate the
effects of typhoons on the marine ecosystem in the HEC.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F9" specific-use="star"><?xmltex \currentcnt{9}?><?xmltex \def\figurename{Figure}?><label>Figure 9</label><caption><p id="d1e2590"><bold>(a)</bold> Time series of the number of typhoons that passed by
the study area during 2003–2020. <bold>(b)</bold> Seasonal distribution of
typhoons. <bold>(c)</bold> Trajectories of typhoons during 2003–2020. The
orange, red, and blue bars in <bold>(a–b)</bold> represent the numbers of
tropical depressions and tropical storms, severe tropical storms and
typhoons, and severe typhoons and super typhoons, respectively. The magenta
and black curves in <bold>(c)</bold> represent the typhoons that passed by the
study area in July and October, respectively. The green curves represent the
typhoons that passed by the study area in the other months.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://os.copernicus.org/articles/19/469/2023/os-19-469-2023-f09.png"/>

        </fig>

      <?pagebreak page479?><p id="d1e2613">Figure 9 shows the time series of the number of typhoons that passed over
the HEC during 2003–2020. Sixty-eight typhoons passed across the
continental shelf of the NWSCS during this 18-year period. There were
interannual variations in the time series of the number of typhoons. As many
as nine typhoons were generated and affected UEH in 2013, while fewer than
two typhoons passed by the study area in 2004, 2007, 2010, and 2014–2015.
Seasonally, 33 typhoons passed by in summer and autumn. As shown in Fig. 5b, a small peak in the mean Chl <inline-formula><mml:math id="M182" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration occurred in July. Moreover,
the Chl <inline-formula><mml:math id="M183" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration was high in 2013, especially in autumn; furthermore, it varied within
the range of 0.7–1.5 mg m<inline-formula><mml:math id="M184" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and coincided with the occurrences of
nine typhoons. This indicates that the high Chl <inline-formula><mml:math id="M185" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentrations were related
to the typhoons. However, typhoons occur on the synoptic scale and influence
the coastal area for several days. Therefore, these processes seem to have a
limited effect on the monthly mean Chl <inline-formula><mml:math id="M186" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration.</p>
</sec>
<sec id="Ch1.S4.SS2">
  <label>4.2</label><title>Role of the coastal current</title>
      <p id="d1e2664">The current in the NWSCS contributes significantly to the transport of
low-salinity water, nutrients, and phytoplankton, and it also affects the
ecological environment (Ding et al., 2018; Meng et al., 2017). The shelf
circulation pattern is dominated by monsoons, tides, buoyancy forcing, and
topography. Due to the changes in the wind direction, the current direction
changes in the different seasons. In autumn and winter, the current in the
NWSCS is predominantly southwestward. It changes to be northeastward in summer
(Ding et al., 2018). The monsoon plays an important role in the current,
which induces onshore and offshore Ekman transport on the shelf during the
winter and summer monsoons, respectively. Gan et al. (2013) found that
transport was induced by amplified geostrophic transport during downwelling
events. Here, we used geostrophic current retrieval from along-track
satellite altimeter data on the shelf of the NWSCS to reflect the role of
the coastal current in relation to the Chl <inline-formula><mml:math id="M187" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration.</p>
      <p id="d1e2674">The latitudinal distribution of the climatological along-track SLA is shown
in Fig. 10. The climatological sea surface in the shelf side is higher
than that in the ocean side in October, November, and December. Additionally, the sea
surface on the shelf was lower than that in the ocean from April to August.
The geostrophic current shows that the current was positive (northeastward)
between April and August, and it was negative (southwestward) between
October and March. The climatological geostrophic current in September was
approximately 0 m s<inline-formula><mml:math id="M188" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, which indicates that the current direction
changed frequently. The climatological geostrophic current was stronger than
0.1 m s<inline-formula><mml:math id="M189" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in summer, and it was strongest in October at approximately
0.17 m s<inline-formula><mml:math id="M190" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>.</p>
      <p id="d1e2713">In autumn and winter, the abundant nutrients in the GDCC, which were
provided by the Pearl River, likely supported the high food availability to
the phytoplankton (Yang and Ye, 2022). The GDCC was characterized by a high
TSS (Figs. 2d and 3e). TSS is synergistic with the concentration of
dissolved nitrogen and is the dominant factor affecting the Chl <inline-formula><mml:math id="M191" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>
concentration (López Abbate et al., 2017). The distribution of the
monthly climatological Chl <inline-formula><mml:math id="M192" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration (Fig. 5b) was similar to that of
the geostrophic current. In summer, the Chl <inline-formula><mml:math id="M193" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration was low during the
northeast oligotrophic current. In winter, the Chl <inline-formula><mml:math id="M194" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration was high
during the southwest nutrient-rich current. Figure 10c presents the time
series of the geostrophic current and Chl <inline-formula><mml:math id="M195" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration. The negative
current and high Chl <inline-formula><mml:math id="M196" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentrations mainly occurred in autumn and winter,
which demonstrates the crucial role of the current in Chl <inline-formula><mml:math id="M197" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> variations.</p>
</sec>
<sec id="Ch1.S4.SS3">
  <label>4.3</label><title>Role of rainfall</title>
      <p id="d1e2774">The phytoplankton responded more positively to the increased precipitation
in the coastal waters (Thompson et al., 2015). Kim et al. (2014) reported
that the increase in wind speed accompanied by rainfall was a major
contributor to the Chl <inline-formula><mml:math id="M198" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration. The precipitation directly deposits
the nutrients in the air into the seawater. In addition, most of the
rainfall on land runs over the land surface into the rivers and eventually
into the ocean, transporting nutrients to the ocean. Therefore, rain plays
an important role in the variability of phytoplankton in coastal waters.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F10"><?xmltex \currentcnt{10}?><?xmltex \def\figurename{Figure}?><label>Figure 10</label><caption><p id="d1e2786"><bold>(a)</bold> Latitudinal distribution of climatological
along-track SLA (track number: 114). <bold>(b)</bold> Geostrophic current
retrieval from climatological along-track SLA. <bold>(c)</bold> Time series of
geostrophic current (contours) and Chl <inline-formula><mml:math id="M199" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration (white contour curves).
The shadings in <bold>(a)</bold> represent the ocean, continental shelf, and
land areas, respectively. The red bar with numbers in <bold>(a)</bold> indicates
the water depth of the along-track SLA data. The values in <bold>(c)</bold> are
the exponents of the Chl <inline-formula><mml:math id="M200" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://os.copernicus.org/articles/19/469/2023/os-19-469-2023-f10.png"/>

        </fig>

      <?pagebreak page480?><p id="d1e2827">Figure 11 shows the time series of the monthly mean rainfall rate and
Chl <inline-formula><mml:math id="M201" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration. The rainfall rate was high in the summer and autumn,
ranging from 0.3 to 1.4 mm h<inline-formula><mml:math id="M202" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. In October in 2007–2017, the monthly
mean rainfall rate (<inline-formula><mml:math id="M203" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula> mm h<inline-formula><mml:math id="M204" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> coincided with the high
Chl <inline-formula><mml:math id="M205" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F11"><?xmltex \currentcnt{11}?><?xmltex \def\figurename{Figure}?><label>Figure 11</label><caption><p id="d1e2884">Time series of the rainfall rate (contours) and Chl <inline-formula><mml:math id="M206" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>
concentration (dotted curves with text labels). The values on the contours
are the exponents of the Chl <inline-formula><mml:math id="M207" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://os.copernicus.org/articles/19/469/2023/os-19-469-2023-f11.png"/>

        </fig>

      <p id="d1e2907">Runoff is the main source of silicate in coastal waters (Zhang et al.,
2003). Chen et al. (2016) observed that the concentration of silicate was as
high as 2–12 <inline-formula><mml:math id="M208" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>mol L<inline-formula><mml:math id="M209" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in the coastal waters of the HEC and had a
positive correlation with the Chl <inline-formula><mml:math id="M210" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration. Wang et al. (2018) found
that diatoms contributed 88.11 % and 85.81 % of the total phytoplankton
abundance in the northern SCS in May and October, respectively. The Chl <inline-formula><mml:math id="M211" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>
concentration can increase by 0.3 mg m<inline-formula><mml:math id="M212" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> after a rainfall
event (Zeng et al., 2022). Moreover, in Mode 2 of the EOFs (Figs. 6–7),
the positive phase of the Chl <inline-formula><mml:math id="M213" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration occurred off the east coast of
Hainan Island in October, which is near the estuary of the Wanquan River.
Therefore, the runoff caused by the high rainfall rate triggered the high
Chl <inline-formula><mml:math id="M214" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentrations in the HEC.</p>
</sec>
<sec id="Ch1.S4.SS4">
  <label>4.4</label><title>Relationship with ENSO events</title>
      <p id="d1e2979">ENSO has an indirect positive effect on the Chl <inline-formula><mml:math id="M215" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration through its
influences on precipitation, winds, SST, and turbidity (López Abbate et
al., 2017). During El Niño events, the southwesterly wind anomalies
would enhance the coastal upwelling in the SCS (Jing et al., 2011; Kuo et
al., 2008). The positive southwesterly wind anomalies lag the El Niño
event by several months (Hong and Zhang, 2021; Huynh et al., 2020). The reverse
occurs during La Niña events.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F12"><?xmltex \currentcnt{12}?><?xmltex \def\figurename{Figure}?><label>Figure 12</label><caption><p id="d1e2991">Time series of Chl <inline-formula><mml:math id="M216" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> (green curve) and along-shelf wind
(black curve). Stripes point out the El Niño (magenta) and La Niña (blue)
events. The blue with black arrows point out the minima value of Chl <inline-formula><mml:math id="M217" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>
concentration. The dashed magenta lines indicate high Chl <inline-formula><mml:math id="M218" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentrations during El Niño events.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://os.copernicus.org/articles/19/469/2023/os-19-469-2023-f12.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F13"><?xmltex \currentcnt{13}?><?xmltex \def\figurename{Figure}?><label>Figure 13</label><caption><p id="d1e3023">Bubble diagram showing the relationships between the
geostrophic current and rainfall and the Chl <inline-formula><mml:math id="M219" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration. The size of the
bubble represents the Chl <inline-formula><mml:math id="M220" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration. The left panel in gray represents
the southwestern along-shelf current in winter. The right panel represents the
northeastern along-shelf current in summer. Black arrows represent the
relationship between the geostrophic current and rainfall and the Chl <inline-formula><mml:math id="M221" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>
concentration.</p></caption>
          <?xmltex \igopts{width=213.395669pt}?><graphic xlink:href="https://os.copernicus.org/articles/19/469/2023/os-19-469-2023-f13.png"/>

        </fig>

      <p id="d1e3054">In the upwelling season, i.e., summer, the wind was larger during El
Niño events than during La Niña events (Fig. 12). In summer 2005,
after an El Niño event, the wind stress and upwelling area were much
larger than that in summer 2004 before the event. The upwelling area
increased in 2005 as shown in Fig. 4b, while the Chl <inline-formula><mml:math id="M222" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration
decreased to 0.6 mg m<inline-formula><mml:math id="M223" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in June 2005. During 2015–2016, the summer wind
stress and curl were both strong, and the upwelling area was larger than that
in 2014. There was an anomalously high Chl <inline-formula><mml:math id="M224" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration that occurred in June 2016.
Jing et al. (2011) reported an analogously high Chl <inline-formula><mml:math id="M225" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration anomaly
in 1998. We should notice that a maximum SST occurred in summer 2016, with a
maximum in terms of Chl <inline-formula><mml:math id="M226" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration, while minimum values of background
SST (Fig. 4b) occurred in summer of the years 2008, 2011, 2012, 2017, and
2018 combined with a minimum in terms of Chl <inline-formula><mml:math id="M227" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration (arrows in Fig. 12).
Therefore, ENSO events regulated the Chl <inline-formula><mml:math id="M228" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration of the upwelling
through wind stress and background SST. Further research is required to
investigate the relationship between the Chl <inline-formula><mml:math id="M229" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> variability and ENSO in the
HEC.</p>
      <p id="d1e3119">In autumn, especially October, the spatial mean Chl <inline-formula><mml:math id="M230" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in the
upwelling area was as high as 1.18 <inline-formula><mml:math id="M231" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.23 mg m<inline-formula><mml:math id="M232" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. The
precipitation was heavier during La Niña events (i.e., in 2005, 2007,
2010–2011, and 2016) than<?pagebreak page481?> during El Niño events. Furthermore, the
along-shelf current from the north was crucially important to the Chl <inline-formula><mml:math id="M233" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>
concentration. There was a positive relationship between the Chl <inline-formula><mml:math id="M234" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> anomalies
and the La Niña events.</p>
</sec>
<sec id="Ch1.S4.SS5">
  <label>4.5</label><?xmltex \opttitle{Mechanisms of Chl~$a$ variations in the HEC area}?><title>Mechanisms of Chl <inline-formula><mml:math id="M235" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> variations in the HEC area</title>
      <p id="d1e3179">Figure 13 shows the relationships between the geostrophic current and
rainfall and the Chl <inline-formula><mml:math id="M236" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration during 2003–2020. The Chl <inline-formula><mml:math id="M237" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration
increased with increasing rainfall in August, i.e., the upwelling season.
The rainfall was converted to runoff and flowed into the coastal waters. The
Chl <inline-formula><mml:math id="M238" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in summer was mainly regulated by upwelling processes
(Jing et al., 2011). Therefore, the increased precipitation and weaker
upwelling processes could have induced the increased Chl <inline-formula><mml:math id="M239" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in
the HEC (upward arrow in Fig. 13).</p>
      <p id="d1e3210">In autumn and winter, the Chl <inline-formula><mml:math id="M240" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration was increased by the increases in
both rainfall and the northeastward coastal current (oblique upward arrow
in Fig. 13). In October, the heaviest rainfall and the strongest current
coincided with the highest Chl <inline-formula><mml:math id="M241" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration. The coastward wind component
was strongest in October (Fig. 2a), as was the northeast monsoon, which
induced coastward Ekman transport (Xuan et al., 2021). The downwelling
movement transported the nutrients from the rivers and the coastal current
to the middle and under layers on the shelf, which promoted an increase in
silicate-favoring phytoplankton. The cruise data provide evidence of the
high Chl <inline-formula><mml:math id="M242" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentrations over the shelf (Fig. 8h).</p>
</sec>
</sec>
<sec id="Ch1.S5" sec-type="conclusions">
  <label>5</label><title>Conclusions</title>
      <p id="d1e3243">In this study, in situ observations and monthly satellite observations from
2003 to 2020 are used to investigate the spatiotemporal variability in the
Chl <inline-formula><mml:math id="M243" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in the HEC area. Along-track satellite altimeter data for
the continental shelf of the NWSCS were used to retrieve the geostrophic
current. In addition, cruise data obtained in October 2019 and July 2021
were used to examine the vertical structure of the Chl <inline-formula><mml:math id="M244" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration during
the three observational seasons.</p>
      <p id="d1e3260">Due to global warming, the SST of the core upwelling area (within a depth of
100 m) in summer increased while the area decreased, which indicates that the
UEH weakened during the 18-year study period. The EOF analysis of the
Chl <inline-formula><mml:math id="M245" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration revealed that it exhibited strong seasonal and interannual
variability in the NWSCS. The climatological average Chl <inline-formula><mml:math id="M246" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration
mostly peaked near the coast in autumn at 1.18 mg m<inline-formula><mml:math id="M247" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. However, the
Chl <inline-formula><mml:math id="M248" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in the core upwelling area was lowest during the upwelling
season at approximately 0.74 mg m<inline-formula><mml:math id="M249" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in summer, which contradicts the
previous conclusion of a high-productivity upwelling system.</p>
      <p id="d1e3308">ENSO events regulated the Chl <inline-formula><mml:math id="M250" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration of the upwelling area through
wind stress and background SST. The interannual variations in the spatial
mean of the Chl <inline-formula><mml:math id="M251" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration were consistent with the ENSO events. In El
Niño years, the Chl <inline-formula><mml:math id="M252" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration decreased to a lower level in summer.
However, the summer Chl <inline-formula><mml:math id="M253" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration increases to as high as 1.0 mg m<inline-formula><mml:math id="M254" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> with weak upwelling. The complicated relationship between the
Chl <inline-formula><mml:math id="M255" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> variability and ENSO in the HEC needs further pursuing.</p>
      <p id="d1e3359">Both the along-shelf current from the north and the precipitation were crucial
factors controlling the Chl <inline-formula><mml:math id="M256" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration in the UEH area. The downwelling
movement transported nutrients from the rivers and the coastal current to
the middle and lower layers on the shelf, which promoted an increase in
silicate-favoring phytoplankton. These results provide scientific evidence
for the development of the marine economy in the upwelling area.</p>
</sec>

      
      </body>
    <back><notes notes-type="dataavailability"><title>Data availability</title>

      <p id="d1e3373">Kd490, Rrs645, Chl <inline-formula><mml:math id="M257" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>, SST, and PAR data were downloaded from the Ocean Color Data Processing System (<uri>http://oceandata.sci.gsfc.nasa.gov/</uri>, last access: 16 September 2021)
SSW, SSS, rainfall rate, and along-track SLA data were downloaded from CMEMS
(<uri>https://marine.copernicus.eu/</uri>, last access: 7 December 2021)
The shipboard sections data are archived at
<ext-link xlink:href="https://doi.org/10.6084/m9.figshare.19679538" ext-link-type="DOI">10.6084/m9.figshare.19679538</ext-link> (Li, 2023).
The typhoon track was obtained from the Tropical Cyclone Data Center of the
China Meteorological Administration (CMA) (<ext-link xlink:href="https://doi.org/10.1007/s00376-020-0211-7" ext-link-type="DOI">10.1007/s00376-020-0211-7</ext-link>, China Meteorological Administration, 2023).
The Niño index was downloaded from the Climate Prediction Center of the<?pagebreak page482?> National Weather
Service (<uri>https://origin.cpc.ncep.noaa.gov/products/analysis_monitoring/ensostuff/ONI_v5.php</uri>, last access: 19 October 2021).</p>
  </notes><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d1e3402">JL, ML, and LX were responsible for writing the original draft of the paper.
The review and editing of the paper were conducted by QAZ. Conceptualization was handled by
JL, QZ, and LX. CW, YX, and TZ were responsible for data curation. LX
acquired funding.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d1e3408">The contact author has declared that none of the authors has any competing interests.</p>
  </notes><notes notes-type="disclaimer"><title>Disclaimer</title>

      <p id="d1e3414">Publisher’s note: Copernicus Publications remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e3420">The authors are grateful to Manuel Vargas-Yáñez and one anonymous reviewer for their valuable
suggestions and comments.</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d1e3425">This research was funded by the National Key Research and Development
Program of China (grant no. 2022YFC3104805), the National Natural Science Foundation of
China (grant nos. 42276019, 41476009, 41976200, 41506018, 41706025), the Innovation Team
Plan for Universities in Guangdong Province (grant no. 2019KCXTF021), the First-class
Discipline Plan of Guangdong Province (grant nos. 080503032101, 231420003), and the Guangdong Science and Technology Plan Project (Observation of Tropical marine environment in Yuexi).</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d1e3431">This paper was edited by Aida Alvera-Azcárate and reviewed by Manuel Vargas-Yáñez and one anonymous referee.</p>
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