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<article xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:oasis="http://docs.oasis-open.org/ns/oasis-exchange/table" xml:lang="en" dtd-version="3.0" article-type="research-article"><?xmltex \makeatother\@nolinetrue\makeatletter?>
  <front>
    <journal-meta><journal-id journal-id-type="publisher">OS</journal-id><journal-title-group>
    <journal-title>Ocean Science</journal-title>
    <abbrev-journal-title abbrev-type="publisher">OS</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Ocean Sci.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1812-0792</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/os-18-1419-2022</article-id><title-group><article-title><?xmltex \hack{\vskip-1mm}?>Upper-ocean response to the passage of tropical cyclones <?xmltex \hack{\break}?> in the Azores
region</article-title><alt-title>Upper-ocean response to the passage of tropical cyclones in the Azores region</alt-title>
      </title-group><?xmltex \runningtitle{Upper-ocean response to the passage of tropical cyclones in the Azores region}?><?xmltex \runningauthor{M. M. Lima et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Lima</surname><given-names>Miguel M.</given-names></name>
          <email>malima@fc.ul.pt</email>
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff2">
          <name><surname>Gouveia</surname><given-names>Célia M.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-3147-5696</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff3">
          <name><surname>Trigo</surname><given-names>Ricardo M.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-4183-9852</ext-link></contrib>
        <aff id="aff1"><label>1</label><institution>Instituto Dom Luiz (IDL), Faculdade de Ciências, Universidade de
Lisboa, 1749-016, Lisbon, Portugal</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Instituto Português do Mar e da Atmosfera (IPMA), I.P., 1749-077,
Rua C do Aeroporto, Lisbon, Portugal</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Departamento de Meteorologia, Universidade Federal do Rio de Janeiro,
Rio de Janeiro 21941-919, Brasil</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Miguel M. Lima (malima@fc.ul.pt)</corresp></author-notes><pub-date><day>29</day><month>September</month><year>2022</year></pub-date>
      
      <volume>18</volume>
      <issue>5</issue>
      <fpage>1419</fpage><lpage>1430</lpage>
      <history>
        <date date-type="received"><day>8</day><month>March</month><year>2022</year></date>
           <date date-type="rev-request"><day>10</day><month>March</month><year>2022</year></date>
           <date date-type="rev-recd"><day>21</day><month>July</month><year>2022</year></date>
           <date date-type="accepted"><day>27</day><month>July</month><year>2022</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2022 </copyright-statement>
        <copyright-year>2022</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://os.copernicus.org/articles/.html">This article is available from https://os.copernicus.org/articles/.html</self-uri><self-uri xlink:href="https://os.copernicus.org/articles/.pdf">The full text article is available as a PDF file from https://os.copernicus.org/articles/.pdf</self-uri>
      <abstract><title>Abstract</title>

      <p id="d1e115">Tropical cyclones (TCs) are extreme climate events that are known
to strongly interact with the ocean through two mechanisms: dynamically
through the associated intense wind stress and thermodynamically through
moist enthalpy exchanges at the ocean surface. These interactions contribute
to relevant oceanic responses during and after the passage of a TC, namely
the induction of a cold wake and the production of chlorophyll (Chl <inline-formula><mml:math id="M1" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>)
blooms. This study aimed to understand these interactions in the Azores
region, an area with relatively low cyclonic activity for the North Atlantic
basin, since the area experiences much less intense events than the rest of
the basin. Results for the 1998–2020 period showed that the averaged induced
anomalies were on the order of <inline-formula><mml:math id="M2" display="inline"><mml:mrow><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.050</mml:mn></mml:mrow></mml:math></inline-formula> mg m<inline-formula><mml:math id="M3" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for Chl <inline-formula><mml:math id="M4" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M5" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.615</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M6" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C for SST (sea surface temperature). Furthermore, looking at the role played by
several TCs characteristics we found that the intensity of the TCs was the
most important condition for the development of upper-ocean responses.
Additionally, it was found that bigger TCs caused greater induced anomalies
in both variables, while faster ones created greater Chl <inline-formula><mml:math id="M7" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> responses, and
TCs that occurred later in the season had greater TC-related anomalies. Two
case studies (Ophelia in 2017 and Nadine in 2012) were conducted to
better understand each upper-ocean response. Ophelia was shown to affect the
SST at an earlier stage, while the biggest Chl <inline-formula><mml:math id="M8" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> induced anomalies were
registered at a later stage, allowing the conclusion that thermodynamic
exchanges conditioned the SST more while dynamical mixing might have played
a more important role in the later stage. Nadine showed the importance of
the TC track geometry, revealing that the TC track observed in each event
can impact a specific region for longer and therefore result in greater induced
anomalies.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

      <?xmltex \hack{\newpage}?>
<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d1e199">Tropical cyclones (TCs) are potentially intense atmospheric disturbances
which are characterised by a low-pressure centre (eye) which strong winds
curl around. Among other important properties, TCs are thermodynamically
dependent phenomena, meaning that intense temperature gradients need to
occur in the lower atmosphere to maintain and intensify the storm. Thus, TCs
are fed from warm seawater which provide a strong moist enthalpy flux from
the oceanic surface to maintain a steep temperature gradient within the
lower and middle troposphere and produce massive water vapour convection
(Emanuel, 2003; Holton and Hakim, 2012; Pearce, 1987).</p>
      <p id="d1e202">The strong wind stress present near the surface and the associated intense
curl are also shown to induce vertical mixing and Ekman upwelling in the
upper layer of the ocean. In his seminal study, Price (1981) shows, through
both observed and numerical modelling data, the evolution of sea surface
temperature (SST) in the passage of a hurricane, with the emergence of a
cold wake of SST after a TC due to entrainment of water from deeper layers.
This effect has since been well studied and documented with many case
studies observed, for example, the case of Hurricane Felix, in the vicinity
of Bermuda in 1995, which showed decreases in the order of 3.5–4 <inline-formula><mml:math id="M9" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (Dickey et al., 1998), or the cases of cyclones Nargis (2008)
and Laila (2010), in the Bay of Bengal, which caused SSTs to drop by around
1.76 <inline-formula><mml:math id="M10" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (Maneesha et al., 2012). Additionally, several
model-based works focused on either the effects caused by the TCs or the
interaction of the TC with its own cold wake (e.g. Chen et al., 2017; Zhang et al.,
2019).</p>
      <p id="d1e223">There are also biological responses to the passage of a TC. Due to the
upwelling of colder water, transport of nutrient-rich water from the
sub-superficial layer may also occur (Kawai and Wada, 2011). In this case,
phytoplankton can quickly increase in the surface layer following the rise
in nutrients. This increase can be remotely sensed through satellite
observations that capture the chlorophyll <inline-formula><mml:math id="M11" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration (Chl <inline-formula><mml:math id="M12" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>) increasing
after the passage of a TC, since Chl <inline-formula><mml:math id="M13" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> is generally accepted as a proxy for
biological activity (Kawai and Wada, 2011; Liu et al., 2009; Subrahmanyam et al., 2002;
Walker et al., 2005).</p>
      <p id="d1e247">The oceanic response, either physical or biological, to the passage of a TC
depends on various aspects, most remarkably the TC's intensity and its
translation speed but also the oceanic subsurface conditions (Zheng et al.,
2008). The magnitude and significance of these aspects for the modulation of
the oceanic response vary regionally, although it is generally seen that
the most impactful phenomena are intense and slow TCs (Chacko, 2019; Price,
1981; Price et al., 1994). Recent studies (e.g. Chacko, 2019; Pan et al.,
2018; Shropshire et al., 2016) have shown that regional differences do
matter when studying the biological response. In the case of the Bay of
Bengal, it was shown that the intensity of a TC is less important, and the
most meaningful aspects are the TCs' translation speed and, to a lesser
degree, a pre-existing shallow mixed layer (Chacko, 2019). The results from
this study show that it is important to stress that relatively weaker TCs can also
induce a strong biological response after their passage.</p>
      <p id="d1e251">Until now, the Azores region has not been studied regarding its
thermodynamic and biological impacts. This section of the North Atlantic (NA)
basin presents much fewer and weaker cyclones than the tropical band of the
basin, with this region being mainly a zone where TCs undergo either
cyclosis or post-tropical transition into extra-tropical cyclones or
midlatitude storms (Baatsen et al., 2015; Haarsma et al., 2013). The
north-eastern Atlantic (NEA) Basin, where the Azores archipelago is located,
presents significantly less TCs than the western counterpart, closer to the
US coast (Baatsen et al., 2015; Lima et al., 2021; Haarsma et al., 2013).
However, there is growing evidence of a significant increase in the
frequency of strong TCs in both western (Kossin et al., 2020) and eastern
(Lima et al., 2021) halves of the North Atlantic Ocean. The climatology of
the area points to a south–north gradient in both SST and Chl <inline-formula><mml:math id="M14" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>, with a
decrease in the former and an increase in the latter (Amorim et al., 2017;
Caldeira and Reis, 2017). In general, the southern part of the Azores region
offers SSTs high enough to maintain TCs, although the necessary atmospheric
conditions (e.g. high lapse rates and low wind shear) need to occur for
their passage north-east through the Azores (Lima et al., 2021). However,
this area is undergoing a transition due to anthropogenic climate change, and
an increase both in number and intensity of TCs is expected (Baatsen et al.,
2015; Haarsma et al., 2013). Therefore, the NEA Basin is a challenging study
region to assess the impact that lower-intensity TCs have on the oceanic
surface.</p>
      <p id="d1e261">The main aim of this study is to analyse in detail the upper-ocean response
observed after the passage of a TC in the Azores region, which is
characterised by its lower-than-normal cyclonic activity in relation to the
rest of the North Atlantic basin. In particular, we aim to evaluate the
impacts on SST and Chl <inline-formula><mml:math id="M15" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration produced by important TC
characteristics (averaged maximum wind speed, average translation speed,
overall impacted area, time of occurrence, and geometry of the track). Two
practical case studies, relative to Nadine (2012) and Ophelia (2017) are
then thoroughly analysed to reflect the conclusions drawn for this area.</p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Data</title>
      <p id="d1e279">The main data used to evaluate the oceanic response in this study are divided
into three main parts: remotely sensed interpolated data used to
characterise the Chl <inline-formula><mml:math id="M16" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and SST and TC track data, which
provides the necessary additional information on the location and dynamic
variables of each TC, which allow us to explore the oceanic response in the
aforementioned data. Additionally, non-interpolated datasets are used for
the case studies to validate the interpolated ones, and wind stress data are
used for the Hurricane Ophelia case study.</p>
      <p id="d1e289">Biological oceanic response was evaluated using a multi-sensor daily Chl <inline-formula><mml:math id="M17" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>
product available through the Copernicus Marine Environment Monitoring
Service (CMEMS) in a 4 km <inline-formula><mml:math id="M18" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 4 km resolution from the end of 1997 to the
present (CMEMS, 2021b). This product, delivered by the ACRI-ST company, is
based on the Copernicus-GlobColour project and obtained by merging different
sensors: SeaWiFS, MODIS, MERIS, VIIRS-SNPP&amp;JPSS1, and OLCI-S3A&amp;S3B. The
final Chl <inline-formula><mml:math id="M19" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> product is a mix of several algorithms that consider different
water conditions, such as oligotrophic, mesotrophic, coastal, clear, and
complex waters (Garnesson et al., 2019). To produce a “cloud-free”
product, the resulting data were subjected to daily interpolation to fill any
gaps (Krasnopolsky et al., 2016; Saulquin et al., 2019). The lack of gaps in
this dataset is particularly relevant in the context of this study since the
areas analysed will be concentrated around the TCs; it is then expected that
large amounts of the analysed areas would be under cloud coverage and,
therefore, some of the analysed data are not real but interpolated values.
Nonetheless, CMEMS provides approximate uncertainty levels for these data,
which we used to assess the quality of our results. For further validation
purposes we also used a non-interpolated Chl <inline-formula><mml:math id="M20" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> product generated by the
Ocean Colour component of the European Space Agency's Climate Change
Initiative project (OC-CCI) (Sathyendranath et al., 2019). This dataset
results from the merging of several sensors: SeaWiFS LAC and GAC, MODIS Aqua,
MERIS, VIIRS, and OLCI. ESA's OC-CCI version 5.0 Chl <inline-formula><mml:math id="M21" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> product has a 0.042<inline-formula><mml:math id="M22" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution and a daily temporal resolution
(Sathyendranath et al., 2021).</p>
      <p id="d1e337">To evaluate the physical oceanic response and to relate this to the
biological one, a daily SST dataset from the CMEMS was used, with a
0.05<inline-formula><mml:math id="M23" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution. These data are available from 1981 up to the
near present (CMEMS, 2021a). Similarly to the previous CMEMS interpolated
Chl <inline-formula><mml:math id="M24" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> product, the SST field is also a blended gap-free analysis product,
with the present one resulting from reprocessed (A)ATSR, SLSTR, and AVHRR sensor data being applied to the Operational SST and Sea Ice Analysis
(OSTIA) system (Donlon et al., 2012). This reprocessed analysis product
provides an estimate of the SST at 20 cm depth. The inputs to the system are
SSTs at 10:30 and 22:30 local time, which means that the analyses
roughly correspond to the daily average SST (Good et al., 2020; Lavergne et
al., 2019; Merchant et al., 2013). As stated before, approximated error
values for SST are also provided by CMEMS. Additionally, AVHRR Pathfinder
version 5.3 collated data were used as non-interpolated data for validation.
This dataset, similarly to the CMEMS one, is a collection of a twice daily
(averaged to daily), 4 km spatial resolution, merged SST product, provided
by NOAA's National Centers for Environmental Information (Saha et al.,
2018). The merging of these data, however, is only used to spatially collate
the data, as they are a single instrument measurement (AVHRR) onboard NOAA-7
through NOAA-19 Polar Operational Environmental Satellites (POES).</p>
      <p id="d1e356">Wind stress data to assist in the analysis of the Hurricane Ophelia case study were provided by NOAA's CoastWatch dataset available at <uri>https://coastwatch.pfeg.noaa.gov/erddap/griddap/erdQMstress1day_LonPM180.html</uri>. This dataset is derived from wind measurements obtained from
the Advanced Scatterometer (ASCAT) instrument on board EUMETSAT's MetOp
satellites (A and B) at a daily 0.25<inline-formula><mml:math id="M25" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> resolution, from 2013
to the present. ASCAT presents a near all-weather capacity (not affected by
clouds), as it operates a frequency in C-band (5.255 GHz), therefore,
minimising the number of missing values in predominately clouded areas such
as the case of TC paths.</p>
      <p id="d1e372">The TC track data are made available by the International Best Track Archive for Climate Stewardship Project version 4 (IBTrACS v4) free-access dataset (Knapp et al., 2010). This dataset contains global information
regarding TC activity from the 1851 hurricane season up to 2020. It
aggregates variables such as TC geographical location, maximum wind speed,
minimum sea level pressure, and storm radius estimation based on wind
intensity, measured at 6 h intervals (original dataset interpolates for
increased resolution, at 3 h rates; however this interpolation only
includes the geographical location). For the 1998–2020 period, the Azores
region experienced the passage of 62 individual TCs accounting to 642 6 h
observations that are categorised in the following intensities according to
the Saffir–Simpson hurricane wind scale (Taylor et al., 2010):
<list list-type="bullet"><list-item>
      <p id="d1e377">148 tropical depression observations</p></list-item><list-item>
      <p id="d1e381">389 tropical storm observations</p></list-item><list-item>
      <p id="d1e385">85 category 1 hurricane observations</p></list-item><list-item>
      <p id="d1e389">18 category 2 hurricane observations</p></list-item><list-item>
      <p id="d1e393">2 category 3 hurricane observations.</p></list-item></list>
The full TC tracks can be better visualised in Fig. 1, with panel (a)
showing the full track for all these 62 TCs observed in the NA basin for the
1998–2020 period and panel (b) showing a zoomed view relative to the
considered Azores region. Tropical depression observations (dark blue in
Fig. 1b) account for 23 % of the total observations and will
not be considered in this study, as they present the lower branch of
intensities with winds below the 34 kt (18 m s<inline-formula><mml:math id="M26" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) threshold. Therefore, a
total of 494 TC 6 h observations were considered for this study.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><?xmltex \currentcnt{1}?><?xmltex \def\figurename{Figure}?><label>Figure 1</label><caption><p id="d1e411"><bold>(a)</bold> North Atlantic basin and the tracks of all the TCs
that went through or occurred inside the study region (shown by the red
outline). <bold>(b)</bold> Zoom of the previous red outline, with each TC
observation marked in different colours for intensity (TD: tropical
depression; TS: tropical storm; Cat1–Cat5: hurricane category according to
the hurricane Saffir–Simpson wind scale).</p></caption>
        <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://os.copernicus.org/articles/18/1419/2022/os-18-1419-2022-f01.png"/>

      </fig>

      <p id="d1e425">Since the interpolated datasets used for most of this study do not share the
same timeframe and to better encapsulate full years of data, the timeframe
of the present study will be from 1 January 1998 to 31 December 2020. Moreover, while we have extracted all the data described above
covering the entire North Atlantic basin, we will focus on the area around
the Azores archipelago, delimited by the 15<inline-formula><mml:math id="M27" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W and
40<inline-formula><mml:math id="M28" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W meridians and between the 30<inline-formula><mml:math id="M29" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N and
the 45<inline-formula><mml:math id="M30" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N parallels (Fig. 1).</p>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Methodology</title>
      <p id="d1e472">The region of study was chosen due to its nature regarding TCs, since it is
an area with fewer and less intense tropical storms (Hart and Evans, 2001;
Lima et al., 2021; Ramsay, 2017). Generally, tropical cyclosis and
post-tropical transition occur here (Baatsen et al., 2015; Haarsma et al.,
2013). Because of these aspects, it corresponds to a much less studied area
and is a good region to characterise oceanic biophysical effects after the
passage of (generally) weaker TCs at higher-than-tropical latitudes and to
compare the obtained results with previous literature.</p>
      <p id="d1e475">To cope with large amounts of data, the biophysical response was evaluated
within a small area around individual locations obtained for each TC's
best-track location. For this, we used the approximated quadrant radius
given by the IBTrACS v4 dataset. This dataset provides different types of
radii depending on the considered isotach; for this study we used the 34 kt
isotach as it corresponds to the lower bound for the tropical storm status
according to the Saffir–Simpson hurricane wind scale (Taylor et al., 2010).
Since the considered area of analysis falls above the 34 kt isotach,
tropical depressions were not considered (exact partition of intensities is
given at the end of Sect. 2). There are some missing radii values
in the middle of the TC tracks, and, to correct those, a simple linear regression
was applied. To illustrate the application of this methodology we present
the case studies in Sect. 4, for hurricanes Ophelia (2017) and Nadine
(2012). From inside this area of analysis, we may retrieve the Chl <inline-formula><mml:math id="M31" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>
concentration and SST at their respective resolution. The analysis inside
the considered area was performed using histograms, in which each pixel
inside the 34 kt isotach contributes to that TC's histogram.</p>
      <p id="d1e485">To analyse the TCs' impact on their passage, inspiration was taken from
Kawai and Wada (2011), who computed the climatic monthly standard deviation
of Chl <inline-formula><mml:math id="M32" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> on 0.25<inline-formula><mml:math id="M33" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> grids over a 5-year study period. Here, we
compute the daily normalised anomaly from the climatological value (in
standard deviation units). For this, we first calculated the climatological
mean and associated standard deviation of both Chl <inline-formula><mml:math id="M34" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and SST values for the
region that is impacted by each TC on the day of analysis. This is achieved
considering the 3 d before and 3 d after the day of analysis,
totalling 1 week that is then retrieved from the entire study period of 22 years, thus ensuring a larger sample and a smoother continuous curve. Then,
we compute the mean value in the same area (in which only the TC area was
considered) for the day of analysis, and finally, we calculate the
normalised anomaly from the climatology on that day. This analysis was
performed considering 30 d before and after each TC to then allow the
analysis and identification of an ideal window to compute the induced
anomalies. To compute this ideal window, we searched for the maximum
difference between the number of standard deviations over the climatological
value before and after the storm.</p>
      <p id="d1e511">To compromise between having the maximum difference and ensuring a time
window as close as possible to the storm (to minimise external factors to
the TC), we performed a sensibility study on the length and location of the
considered time window. First, we analyse the overall maximum difference in
the 61 d period (including the day of the storm) and then search for a
secondary maximum value that is within 10 % of it, considering a smaller
sample of days, decreasing in groups of 5 d each time this search is made
(the first iteration would be 25 d before and 30 after, the second
30 before and 25 after, the third 25 before and after, etc.), until an
optimum maximum difference value is identified. With this window defined,
the induced (or TC-related) anomalies are simply the difference between the
daily values of Chl <inline-formula><mml:math id="M35" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> or SST after and before the TC.</p>
      <p id="d1e522">As an example of this methodology, Fig. 2 shows the Chl <inline-formula><mml:math id="M36" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> standard deviation
over the climatological value in the case of Hurricane Nadine. In this case,
only 15 d around the TC are shown for clarity. We can see that the
maximum difference is obtained between 8 d before and 1 d after the
storm (<inline-formula><mml:math id="M37" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>Chl <inline-formula><mml:math id="M38" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> max). However, when we take into account the
compromise of considering windows located as closely as possible to the
occurrence of the TC over the region, we see that the value found between 4 d before and 1 d after is within 10 % of the absolute maximum. This
methodology is then applied to all 6 h observations individually and for
each TC, thus resulting in two groups of induced anomalies (per TC and per
6 h observations) where we can study these with respect to the TCs
averaged (per TC) or instantaneous (6 h observations) characteristics.</p>
      <p id="d1e546">To address the possibility that some pixels are overlaid on top of each
other, which would contaminate the analysis, as observed in the case of the
slow erratic Hurricane Nadine (presented in the “Results and discussion” section as a case study),
we did not take into consideration the days in which the TC is over the
aforementioned overlaid region. In the case of these pixels, the day
considered to be after the TC is the day after it has completely passed over
the area (i.e. the observations in that pixel during the days the TC is
still over the area are discarded). However, when we consider independent
6 h observations, this caveat cannot be accounted for since we have no
way of knowing if that area has been influenced or not by the TC before, for
how long, or even if a future observation will impact the area.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2"><?xmltex \currentcnt{2}?><?xmltex \def\figurename{Figure}?><label>Figure 2</label><caption><p id="d1e551">Schematic of the applied methodology for each TC. Black line
shows the number of standard deviations from the climatological values for
the area surrounding Hurricane Nadine. A detailed description of this
methodology can be found in the text.</p></caption>
        <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://os.copernicus.org/articles/18/1419/2022/os-18-1419-2022-f02.png"/>

      </fig>

      <p id="d1e560">As previously mentioned in Sect. 2, the interpolated data used for this
study are expected to encounter some regions where clouds are to be expected
due to the presence of the TCs. To account for this potential caveat, we
looked at the uncertainties associated with the data before and after the
TCs as well as during the TC (e.g. day 0 in Fig. 2), to evaluate if there
were clear increases in uncertainty for cloud-covered situations.</p>
      <p id="d1e563">Two case studies were looked at in greater detail: Hurricane Ophelia (2017)
and Hurricane Nadine (2012). The former was performed to assess the
different impacts along the life cycle of the storm, and different histograms
were produced for smaller portions of the TC. The latter was made to analyse
the possible increasing impacts the storm geometry could cause.
Additionally, these case studies were used as validation for the interpolated
cloud-free data, where a comparison was made between the
non-interpolated and the interpolated cloud-free data described in Sect. 2.</p>
</sec>
<sec id="Ch1.S4">
  <label>4</label><title>Results and discussion</title>
      <p id="d1e575">Applying the mentioned methodology leaves us with a large pool of induced
anomalies, from which we can now evaluate the distribution of these
TC-related anomalies for both Chl <inline-formula><mml:math id="M39" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and SST as shown in Fig. 3a and b
in the form of histograms of induced Chl <inline-formula><mml:math id="M40" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and SST induced anomalies,
respectively. Both variables present a large impact after the passage of
TCs, with Chl <inline-formula><mml:math id="M41" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> presenting a mean response of positive 0.050 mg m<inline-formula><mml:math id="M42" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
and the SST showing a mean response of <inline-formula><mml:math id="M43" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.615</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M44" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C. Figure 3c–f show the corresponding distributions as a function of the cyclone's
intensities (Fig. 3c and d) and translation speeds (Fig. 3e and f). To
make these distinctions, we chose only the high values (either regarding
intensity or translation speed) to be those above the third quartile and the
lower values to be those below the second quartile.</p>
      <p id="d1e631">Firstly, regarding intensity (Fig. 3c and d), we have the induced response
of the most powerful intensities in orange and the weaker ones in blue.
Regarding the impact as a function of intensity it is possible to observe
that more powerful TCs tend to induce a stronger biological response than
weaker ones, which have a mean response closer to zero. It is also important
to note that the more powerful TCs have a response that is much more skewed
towards extreme positive values of Chl <inline-formula><mml:math id="M45" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>. Figure 3d also shows a great impact
regarding different intensities in SST, in which even weaker TCs show a
substantial mean response of <inline-formula><mml:math id="M46" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.517</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M47" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C and nearly all the
analysed pixels showing negative induced anomalies. It is important to note the
nearly bimodal nature of this distribution, which can be attributed to both
the earlier phase of TCs (more energy being drawn from the ocean) resulting
in more negative SST values and the less negative corresponding to the
later part of TCs since baroclinic instabilities are more prevalent than the
action of moist enthalpy flux from the ocean at this phase (Baatsen et al.,
2015; Emanuel, 2003). Powerful TCs induced a more varied distribution of
induced anomalies, with a mean response of <inline-formula><mml:math id="M48" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.694</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M49" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C.</p>
      <p id="d1e679">Regarding the different translation speeds, Fig. 3e shows that, for
biological responses, faster TCs show a greater mean value of <inline-formula><mml:math id="M50" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>0.060 mg m<inline-formula><mml:math id="M51" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. This difference is not as remarkable as the one in Fig. 3c. On the
other hand, the SST response (Fig. 3f) seems to be weakly impacted by the
TC's translation speed, with slower TCs having a slightly stronger impact
than faster ones, while the mean response values do not differ as much as
the ones in Fig. 3d. Additionally, even if faster TCs do not affect the SST
response as much as slower ones, the mean value is still close to what is
seen in the general case in Fig. 3b, and most of the impact is towards
negative SSTs.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3"><?xmltex \currentcnt{3}?><?xmltex \def\figurename{Figure}?><label>Figure 3</label><caption><p id="d1e704">Histograms for <bold>(a)</bold> total Chl <inline-formula><mml:math id="M52" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and <bold>(b)</bold> SST induced anomalies;
<bold>(c)</bold> Chl <inline-formula><mml:math id="M53" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and <bold>(d)</bold> SST induced anomalies after weak (blue) and powerful TCs
(orange); <bold>(e)</bold> Chl <inline-formula><mml:math id="M54" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and <bold>(f)</bold> SST induced anomalies after slow TCs (blue) and
fast TCs (orange). Each subplot histogram presents the respective population
mean value (<inline-formula><mml:math id="M55" display="inline"><mml:mi mathvariant="italic">μ</mml:mi></mml:math></inline-formula>) as a dashed black line and the zero value as a grey
line.</p></caption>
        <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://os.copernicus.org/articles/18/1419/2022/os-18-1419-2022-f03.png"/>

      </fig>

      <p id="d1e760">To quantify these relations, Fig. 4 shows the storm-averaged induced
anomalies compared to the averaged maximum wind and average translation
speed. The linear regression is also shown for each of the comparisons, with
nearly all results significant at the 95 % statistical level. According
to these plots, only the translation speed in relation to the SST induced
anomalies (Fig. 4d) did not show a significant relation at the 95 %
statistical confidence level (marked by the dashed regression line).
Regarding the mean wind (Fig. 4a and c), and therefore the TC's average
intensity within the Azores region, the linear regression showed significant
values, upwards of 0.5 for Chl <inline-formula><mml:math id="M56" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M57" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.3</mml:mn></mml:mrow></mml:math></inline-formula> for SST induced anomalies. In the
case of Chl <inline-formula><mml:math id="M58" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>, like observed in Fig. 3, the relation is positive while with
SST this relation is negative. Considering the translation speed, the
relation is equally positive and significant for biological responses (<inline-formula><mml:math id="M59" display="inline"><mml:mrow><mml:mi>r</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.416</mml:mn></mml:mrow></mml:math></inline-formula>).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4"><?xmltex \currentcnt{4}?><?xmltex \def\figurename{Figure}?><label>Figure 4</label><caption><p id="d1e801">Linear regression of Chl <inline-formula><mml:math id="M60" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> <bold>(a, b)</bold> and SST <bold>(c, d)</bold>
induced anomalies for each TC, respectively, when compared with average
winds in knots <bold>(a, c)</bold> and average TC translation speed in knots <bold>(b, d)</bold>. In each plot the Pearson <inline-formula><mml:math id="M61" display="inline"><mml:mi>R</mml:mi></mml:math></inline-formula> is presented, and the
regression's significance is marked by the type of line used in the
regression, with a dashed line representing non-significant regression at a 95 %
confidence level and a solid line representing a regression significant at
the 95 % confidence level.</p></caption>
        <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://os.copernicus.org/articles/18/1419/2022/os-18-1419-2022-f04.png"/>

      </fig>

      <p id="d1e837">Further analysis of other TC characteristics requires a different approach.
Figure 5 shows similar relations to Fig. 4 but considering 6 h observations
instead of total TC mean values. This is made to account for the possible
error that averaging a whole TC may create since the cyclone's
characteristics may change substantially along its lifetime. This analysis,
however, does not consider the possibility of superposition in pixels from
observation to observation – i.e. from a TC that either moves slowly or
whose track is more erratic, ending up covering the same area for several
hours/days. This caveat was not present in Fig. 4 since we considered the TC
lifetime as a whole and could then disregard the days of superposition.
Using 6 h observations, we can study several types of characteristics
that change between observations, such as the impact area or the time of
season when it occurred, adding to the already seen maximum wind speed and
translation speed.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5" specific-use="star"><?xmltex \currentcnt{5}?><?xmltex \def\figurename{Figure}?><label>Figure 5</label><caption><p id="d1e842">Same as in Fig. 4 but considering individual 6 h
observations. Two columns are added: <bold>(b)</bold> and <bold>(f)</bold> with respect to the area
affected by that observation and <bold>(d)</bold> and <bold>(h)</bold> with respect to the time of
the year when that observation occurred.</p></caption>
        <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://os.copernicus.org/articles/18/1419/2022/os-18-1419-2022-f05.png"/>

      </fig>

      <p id="d1e864">Considering then the maximum wind speed per observation (Fig. 5a and e),
both variables are significantly related to this characteristic, which is
expected considering the analysis made in Figs. 3 and 4. As previously noted
in the form of histograms in Fig. 3, most observations show a positive
impact regarding Chl <inline-formula><mml:math id="M62" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and, especially for SST as most fall below zero, a
negative change after a TC. The affected area (Fig. 5b and f) also
presents a significant relation, although less intense than that observed
with the maximum winds. However, it should be noted that this variable is
linked to the mean winds, since more intense cyclones tend to be larger than
less powerful ones, but also to the storm phase, since storms nearing their
post-tropical transition tend to grow larger (Knaff et al., 2014).
Translation speed is the less correlated variable of those studied (Fig. 5c and g), with only the biological response seeing a positive relation to
this characteristic, agreeing with the previous results from Figs. 3 and 4.
The time period in the season in which the TC occurs seems to also be
important for the magnitude of the average induced anomaly seen in both
variables (Fig. 5d and h) with late occurrences in the season showing
greater responses respective to the signal of induced anomalies seen in
Fig. 3a and b. Lastly, a geographical correlation was concluded not to be
relevant for this study (not shown), as both variables were correlated with
both latitude and longitude, and only non-significant relations were found.</p>
      <p id="d1e874">The results presented so far in this study result from interpolated
cloud-free data and should be quality assured to guarantee the integrity
of the conclusions made previously. As mentioned in Sect. 2, CMEMS
provides measures of uncertainty for the Chl <inline-formula><mml:math id="M63" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and SST datasets used. Thus,
we have explored these values at different periods as a first step in
validating the quality of the data. Figure S1 in the Supplement shows the associated
uncertainty with respect to the absolute observed values both for Chl <inline-formula><mml:math id="M64" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> (top
panels) and SST (bottom panels) for three different periods surrounding a TC
event (before, during, and after) and a randomly drawn sample of the same
size as the data analysed in the other subplots. It becomes immediately
clear from these plots the considerably different magnitude of uncertainty
for these data, with Chl <inline-formula><mml:math id="M65" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> (Fig. S1a–d) ranging from 25 % to 45 %
considering all moments, while SST (Fig. S1e–h) does not commonly surpass
0.4 % with a mean error around the 0.25 %. The randomly drawn sample
of data gives a rough idea of the average uncertainty we can find in this
dataset, with Chl <inline-formula><mml:math id="M66" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> (Fig. S1a) presenting values around 35 % and SST
(Fig. S1e) around 0.25 %. Additionally, we should consider three distinct
moments of analysis, namely before and after the TC passage, which
corresponds to the data used to compute the induced anomalies, and during
the TCs, which should be the moment with most cloud cover over the studied
regions. Looking first at Chl <inline-formula><mml:math id="M67" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> (Fig. S1b–d) we see the progression from
near-normal uncertainty before the TC (Fig. S1b) to an increase during TCs
(Fig. S1c), likely due to the larger cloud-covered area in that situation.
After the storm (Fig. S1d) however, the uncertainty substantially decreases
reaching values below the randomly drawn sample (around 30 % compared to
35 %). For the SST (Fig. S1f–h), the associated uncertainty does not
fluctuate substantially, constantly being below the 0.3 % mark.
Additionally, the variation that has been identified before, with Chl <inline-formula><mml:math id="M68" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>
increasing and the SST decreasing, is noticeable in both variables.</p>
      <p id="d1e920">Visible in Figs. 4 and 5 are two case studies: Hurricane Ophelia in 2017
(squares) and Hurricane Nadine in 2012 (triangles). These case studies were
chosen based on the presented characteristics, coupled with the amount of
sampling data within the region. Hurricane Ophelia (2017) was chosen due to
its large intensity in the region (squares, Figs. 4 and 5), reaching a
category 3 intensity on the Saffir–Simpson hurricane wind scale, something
abnormal for the region (Lima et al., 2021). The complete TC track can be seen in the insert in Fig. 6a. Besides the large intensity, Ophelia's genesis took place
inside our study region which enabled us to study different phases of the
storm and its impacts on the ocean surface in the region. Even though
Hurricane Ophelia was so intense, this storm impacted a very small area
(Fig. 5b and f) particularly when compared with the other case study,
Hurricane Nadine (2012). Hurricane Nadine (Fig. 7a) was chosen due to its
large sampling, relatively high intensity (maximum category 1) and great
impact area (second highest in this study, considering cumulative area of
impact). The large impacted area was amplified by the geometry of the
storm's track (i.e. many overlaid observations). Only the final stage of
Hurricane Nadine was caught within the study region, producing an ideal case
study to analyse the impact of a less intense storm that heavily impacted a
particular region due to its geometry.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6" specific-use="star"><?xmltex \currentcnt{6}?><?xmltex \def\figurename{Figure}?><label>Figure 6</label><caption><p id="d1e925">Case study for Hurricane Ophelia, in 2017, with its track on <bold>(a)</bold> (scatter marker colour scheme represents intensity as in Fig. 1),
as well as the affected area around the cyclone (marked as the 34 kt
isotach) with shading according to the number of pixels overlapping. There is an inset with the full track and the region of study marked with a
red box. Ophelia's track is divided into three phases: histograms show induced
Chl <inline-formula><mml:math id="M69" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> <bold>(b)</bold> and SST induced anomalies <bold>(c)</bold> by phase of the storm (colours) and
in total (black). The phase of the storm is marked in <bold>(a)</bold> as triangles
(genesis), squares (maturing), and stars (mature) and correspond to the
colours in <bold>(b)</bold> and <bold>(c)</bold>.</p></caption>
        <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://os.copernicus.org/articles/18/1419/2022/os-18-1419-2022-f06.png"/>

      </fig>

      <p id="d1e960">For the case study of Hurricane Ophelia (2017), three different phases of
the storm were studied, corresponding approximately to cyclogenesis (Fig. 6a, triangles), maturing (Fig. 6a, squares), and mature hurricane (Fig. 6a,
stars). There are 23 total observations; the first two phases encompass eight observations and the last one seven. Each of these phases has its own histogram
in Fig. 6b and c (shown in colours), for the induced Chl <inline-formula><mml:math id="M70" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and SST
TC-related anomalies, respectively. The histograms are inserted into a larger
one (in black), representing the total induced anomalies caused by Ophelia,
and therefore the sum of all three phases will result in the bigger
histogram. Regarding the Chl <inline-formula><mml:math id="M71" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> induced anomalies (Fig. 6b), Ophelia seemed
to have a higher impact towards the end of its track in the region of study,
when the storm had the highest intensity and the mean values of the induced
anomalies increased along the track. Even at the storm's genesis, the
induced anomalies were mostly positive with a mean value of <inline-formula><mml:math id="M72" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>0.006 mg m<inline-formula><mml:math id="M73" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> reaching <inline-formula><mml:math id="M74" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>0.048 mg m<inline-formula><mml:math id="M75" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in the most intense phase. In
contrast, the SST induced anomalies (Fig. 6c) present the highest mean
response (<inline-formula><mml:math id="M76" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.333</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M77" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C) at the initial phase. The SST induced
anomaly is then seen to decrease as the storm goes on, with the last phase
weighing the most in the general distribution (as was seen for Chl <inline-formula><mml:math id="M78" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>).
The highest SST impact of the storm during the initial phases may reflect
that this is the phase of the storm with highest interaction with the ocean,
regarding thermodynamic exchanges (Emanuel, 2003).</p>
      <p id="d1e1043">As a further insight into Ophelia's interaction with the ocean surface, Fig. S2 shows the mean modulus of wind stress on the surface, by day of analysis
(Fig. S2a) and by Ophelia's 6 h observations (Fig. S2b). Marked in both
these plots are the analysed periods in corresponding colours and marker
type to Fig. 6. These plots exceed the original study region, in order to
fully encompass the TCs entire lifetime. There is a significant relation
between the increased mean modulus of the wind stress and the evolution of
the TC in time. This increase may be related to the increase in the storm's
intensity. As Ophelia reaches its maximum intensity, so does the observed
interaction with the ocean, decreasing afterwards as the storm moves
north-eastward and undergoes post-tropical transition. This observed
interaction with the ocean might be the reason for the maximum induced
anomaly of Chl <inline-formula><mml:math id="M79" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> being observed at the end of Ophelia's passage over the
study region, inducing the mixing of the superficial layer.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7" specific-use="star"><?xmltex \currentcnt{7}?><?xmltex \def\figurename{Figure}?><label>Figure 7</label><caption><p id="d1e1055">Case study for Hurricane Nadine, in 2012, with <bold>(a)</bold> the left panel the
same as in Fig. 6. For Nadine, <bold>(b)</bold> and <bold>(c)</bold> pertain to the average
induced Chl <inline-formula><mml:math id="M80" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and SST induced anomalies, respectively, based on the amount
of superposition verified in each pixel.</p></caption>
        <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://os.copernicus.org/articles/18/1419/2022/os-18-1419-2022-f07.png"/>

      </fig>

      <p id="d1e1080">Hurricane Nadine's (2012) case study shows very different behaviour and
impact during its lifetime to that of Hurricane Ophelia. In this case, we
present scatter plots of the averaged induced anomalies for the areas (Fig. 7b and c) corresponding to the superposition of pixels, i.e. the number of
repeated observations inside the 34 kt isotach due to storm track geometry
(as seen in Fig. 7a). The conclusions drawn regarding the Chl <inline-formula><mml:math id="M81" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and SST induced anomalies are similar and significant in this case study: the more
time the TC spent over a certain area the more this area became affected by
its passage, with large TC-related anomalies registered in both variables
compared to less superposed ones (over 0.040 mg m<inline-formula><mml:math id="M82" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and <inline-formula><mml:math id="M83" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3.500</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M84" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C for Chl <inline-formula><mml:math id="M85" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and SST, respectively at 12 superposed
pixels) and all cases being positive (negative) for Chl <inline-formula><mml:math id="M86" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> (SST). It is
possible to hypothesise that the translation speed also had a relevant role
in these results, with a slower TC (Nadine was one of the slowest TCs in
this study, as seen by the closer observations in Fig. 7a and by Figs. 4 and
5) spending more time over a region and therefore producing larger induced
anomalies.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8" specific-use="star"><?xmltex \currentcnt{8}?><?xmltex \def\figurename{Figure}?><label>Figure 8</label><caption><p id="d1e1138">Comparison between interpolated “cloud-free” data <bold>(a–d)</bold> and non-interpolated data <bold>(e–h)</bold> for Hurricanes Ophelia (2017) and
Nadine (2012). Values for non-interpolated data were obtained with the same
methodology as the ones presented before and represent the exact same days
of analysis. Mean values for each histogram are presented, with black
histograms representing the situation before the TC and the grey ones the
situation after.</p></caption>
        <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://os.copernicus.org/articles/18/1419/2022/os-18-1419-2022-f08.png"/>

      </fig>

      <p id="d1e1153">For these two case studies, we considered an additional quality assessment
exercise, by comparing the interpolated cloud-free data to similar
non-interpolated datasets. Figure 8 shows the histograms obtained for
Ophelia and Nadine for the situations before and after the TC,
independently, since non-interpolated data cannot be correctly subtracted as
corresponding pixels may not be available. Overall, and despite the
different number of observations considered, Chl <inline-formula><mml:math id="M87" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> presents the same
average response between the different types of data for both TCs, with
non-interpolated data having an observed mean increase of 0.044 mg m<inline-formula><mml:math id="M88" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
for Ophelia (Fig. 8e) compared to 0.041 mg m<inline-formula><mml:math id="M89" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for interpolated data
(Fig. 8a), with these values representing the difference in the mean values
shown in Fig. 8. Likewise, non-interpolated data reveal an increase of
0.035 mg m<inline-formula><mml:math id="M90" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for Nadine (Fig. 8g) compared to 0.033 mg m<inline-formula><mml:math id="M91" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for
interpolated data (Fig. 8c). Looking at the histograms, the shape of the
data itself does not differ much between the different types, with peaks
more or less located over the same values and distributions ranging over the same
values. However, for the SST variable, despite both TCs presenting
relatively similar decreases between both types of data, the
non-interpolated data have a wider range of values, and the peaks do not
correspond so closely. This, however, may be due to the process of data
collation. In this process, some pixels are averaged with incorrect ones,
resulting in unrealistic values in some areas. This can be identified by the
unrealistic SST seen in Fig. 8f and h, with values that do not support TC
development around 18–19 <inline-formula><mml:math id="M92" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C and reaching 0 <inline-formula><mml:math id="M93" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C. Nonetheless, interpolated SST data do show very low
uncertainty as verified before (Fig. S1).</p>
</sec>
<sec id="Ch1.S5" sec-type="conclusions">
  <label>5</label><title>Final remarks</title>
      <p id="d1e1238">The current study provides the first general assessment of the biophysical
oceanic response to the passage of TCs in a relatively low cyclonic activity
area such as the region near the Azores archipelago. It is important to
stress the efficiency of identifying the precise timing and associated
spatial impacts of all TCs using remotely sensed products that rely on
interpolated areas to fill existing gaps due to cloud coverage or lack of
satellite imagery.</p>
      <p id="d1e1241">Over the Azores region, the existence of a biophysical response after the
passage of a TC was identified from the analysis of Chl <inline-formula><mml:math id="M94" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and SST datasets,
which produced signatures of positive Chl <inline-formula><mml:math id="M95" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and negative SST induced
anomalies. This signature is more intense for the SST analysis, in which the
passage of a TC results in nearly all observed pixels having a negative
(i.e. cooling) induced anomaly. On average, TCs produced positive induced
anomalies in the order of 0.050 mg m<inline-formula><mml:math id="M96" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> regarding Chl <inline-formula><mml:math id="M97" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and a mean SST
cooling of 1.615 <inline-formula><mml:math id="M98" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C.</p>
      <p id="d1e1286">The more powerful TCs tend to produce more intense biophysical oceanic
responses, which agree with previous literature on the topic (Chacko, 2019;
Price, 1981; Price et al., 1994). TC translation speed was also found to be
associated with the induced anomalies, although the relationship was found
to be positive and significant in the case of Chl <inline-formula><mml:math id="M99" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> while it was not
significant at the 95 % statistical confidence level for SST. The
impacted area was also found to be significantly linked to the oceanic
response. However, the sensitivity to the impacted area can rise due to
several other factors: slower TCs impact larger areas (due to track
geometry); more intense TCs impact larger areas (Knaff et al., 2014); and
TCs nearing post-tropical transition are generally larger (Knaff et al.,
2014). These effects, either individually or combined, can affect the
induced anomalies at different levels. Additionally, the oceanic response
was found to be larger later in the season, with significant relation in
both variables. This may be due to the seasonal variability itself, as the
normal climatological values for that time of the year are not seen during
exceptional TC conditions (e.g. SST is usually colder but TC-prone
conditions require it to be higher) (Amorim et al., 2017; Lima et al., 2021)
and the oceanic response may help the impacted area return to values closer
to the climatology, in both variables, in respect to that time of the year.</p>
      <p id="d1e1296">Two particular case studies were evaluated in further detail concerning
hurricanes Ophelia (2017) and Nadine (2012). Hurricane Ophelia was a
particular case as it corresponds to the only major hurricane in this study
region and had almost its entire track inside this area. Ophelia showed
strong induced anomalies for both Chl <inline-formula><mml:math id="M100" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and SST variables. Regarding Chl <inline-formula><mml:math id="M101" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>,
Ophelia had a stronger impact towards the end of its track within the
region, revealing that its intensity played a key role in inducing Chl <inline-formula><mml:math id="M102" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>
TC-related anomalies, with the mean modulus of wind stress revealing a
positive and significative relation to the evolution of the storm and
therefore its intensity. On the other hand, Ophelia had a stronger impact on
the SST in its cyclogenesis, probably related to ocean–atmosphere
thermodynamic exchanges during its maturing. Hurricane Nadine, one of the
slowest TCs in this study, showed more prominent induced anomalies,
especially regarding SST. In this case, considering the low translational
speed of Nadine, the objective was to study the impact that consecutive
overlaid observations had on the induced anomalies. It is evident through
this analysis that the impact increases with the number of superposed
observations, implying that Nadine's slow translation speed and particular
track geometry played a key role in creating such TC-related anomalies.</p>
      <p id="d1e1321">This study allowed for the quality control of both the remotely sensed
cloud-free Chl <inline-formula><mml:math id="M103" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and SST multi-sensor products by comparing them to
similar non-interpolated products and in the sense that it identified
expected changes in the variables in areas covered by TC clouds and
established crucial relations with some principal TC aspects. Future studies
should aim to understand the inherent physical mechanisms that affect the
ocean during and after the passage of a TC to better comprehend the
associated induced anomalies.</p>
</sec>

      
      </body>
    <back><notes notes-type="codedataavailability"><title>Code and data availability</title>

      <p id="d1e1335">All code and raw data used to support the conclusion of this article will be
made available by the authors upon request.</p>
  </notes><app-group>
        <supplementary-material position="anchor"><p id="d1e1338">The supplement related to this article is available online at: <inline-supplementary-material xlink:href="https://doi.org/10.5194/os-18-1419-2022-supplement" xlink:title="pdf">https://doi.org/10.5194/os-18-1419-2022-supplement</inline-supplementary-material>.</p></supplementary-material>
        </app-group><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d1e1347">MML was responsible for conceptualisation, methodology, software, validation, formal
analysis, investigation, writing the original draft, review, and editing.
CMG carried out validation, supervision, and writing (review and
editing). RMT was responsible for validation, supervision, writing (review and editing), and funding acquisition.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d1e1353">The contact author has declared that none of the authors has any competing interests.</p>
  </notes><notes notes-type="disclaimer"><title>Disclaimer</title>

      <p id="d1e1359">Publisher’s note: Copernicus Publications remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e1365">Miguel M. Lima was supported by a grant through the project
“DiscoverAZORES” PTDC/CTA-AMB/28511/2017 supported by the Portuguese Fundação para a Ciência e Tecnologia (FCT) I.P./MCTES. The authors also wish to thank the project “DiscoverAZORES”, PTDC/CTAAMB/28511/2017 for all the help/collaboration. The authors thank the anonymous reviewers for their thoughtful comments, suggestions, and efforts towards improving this work.</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d1e1370">This work was funded by the Portuguese Fundação para a
Ciência e a Tecnologia (FCT) I.P./MCTES through national funds (PIDDAC) – UIDB/50019/2020.</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d1e1377">This paper was edited by Anne Marie Tréguier and reviewed by three anonymous referees.</p>
  </notes><ref-list>
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